RNA–Protein interactions for RNA: ENST00000469207.5

HDAC3-204, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 829 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-204ENST00000469207 PEBP1P30086 187 aaKnown RBP11.84□□□□□ -0.51
HDAC3-204ENST00000469207 HADHAP40939 763 aa11.84□□□□□ -0.51
HDAC3-204ENST00000469207 CD151P48509 253 aa11.84□□□□□ -0.51
HDAC3-204ENST00000469207 RRADP55042 308 aa11.84□□□□□ -0.51
HDAC3-204ENST00000469207 CSE1LP55060 971 aaKnown RBP11.84□□□□□ -0.51
HDAC3-204ENST00000469207 POU6F1Q14863 301 aa11.84□□□□□ -0.51
HDAC3-204ENST00000469207 GPR33Q49SQ1 333 aa11.84□□□□□ -0.51
HDAC3-204ENST00000469207 DCAF10Q5QP82 559 aa11.84□□□□□ -0.51
HDAC3-204ENST00000469207 SARM1Q6SZW1 724 aa11.84□□□□□ -0.51
HDAC3-204ENST00000469207 MRGPREQ86SM8 312 aa11.84□□□□□ -0.51
HDAC3-204ENST00000469207 GPR135Q8IZ08 494 aa11.84□□□□□ -0.51
HDAC3-204ENST00000469207 GALNT16Q8N428 558 aa11.84□□□□□ -0.51
HDAC3-204ENST00000469207 C2orf73Q8N5S3 287 aaPredicted RBP11.84□□□□□ -0.51
HDAC3-204ENST00000469207 C19orf47Q8N9M1 422 aaKnown RBP11.84□□□□□ -0.51
HDAC3-204ENST00000469207 N4BP2L2Q92802 583 aaPredicted RBP11.84□□□□□ -0.51
HDAC3-204ENST00000469207 SPATA13Q96N96 652 aa11.84□□□□□ -0.51
HDAC3-204ENST00000469207 GBP5Q96PP8 586 aa11.84□□□□□ -0.51
HDAC3-204ENST00000469207 ANP32EQ9BTT0 268 aa11.84□□□□□ -0.51
HDAC3-204ENST00000469207 OSBPL8Q9BZF1 889 aa11.84□□□□□ -0.51
HDAC3-204ENST00000469207 ARNT2Q9HBZ2 717 aa11.84□□□□□ -0.51
HDAC3-204ENST00000469207 NLE1Q9NVX2 485 aaPredicted RBP11.84□□□□□ -0.51
HDAC3-204ENST00000469207 CUEDC1Q9NWM3 386 aaPredicted RBP11.84□□□□□ -0.51
HDAC3-204ENST00000469207 ASF1AQ9Y294 204 aa11.84□□□□□ -0.51
HDAC3-204ENST00000469207 NTNG1Q9Y2I2 539 aa11.84□□□□□ -0.51
HDAC3-204ENST00000469207 SBDSQ9Y3A5 250 aaKnown RBP eCLIP11.84□□□□□ -0.51
HDAC3-204ENST00000469207 PCDHA3Q9Y5H8 950 aa11.84□□□□□ -0.51
HDAC3-204ENST00000469207 CSAG2Q9Y5P2 127 aa11.84□□□□□ -0.51
HDAC3-204ENST00000469207 WIPF3A6NGB9 483 aa11.83□□□□□ -0.52
HDAC3-204ENST00000469207 C9J4A7 227 aa11.83□□□□□ -0.52
HDAC3-204ENST00000469207 BHMG1C9JSJ3 638 aaPredicted RBP11.83□□□□□ -0.52
HDAC3-204ENST00000469207 MAP3K7O43318 606 aa11.83□□□□□ -0.52
HDAC3-204ENST00000469207 UMODP07911 640 aa11.83□□□□□ -0.52
HDAC3-204ENST00000469207 CHRM5P08912 532 aaPredicted RBP11.83□□□□□ -0.52
HDAC3-204ENST00000469207 ACADLP28330 430 aa11.83□□□□□ -0.52
HDAC3-204ENST00000469207 CTNNA1P35221 906 aaKnown RBP11.83□□□□□ -0.52
HDAC3-204ENST00000469207 GLRBP48167 497 aa11.83□□□□□ -0.52
HDAC3-204ENST00000469207 CCDC38Q502W7 563 aa11.83□□□□□ -0.52
HDAC3-204ENST00000469207 CRB2Q5IJ48 1285 aa11.83□□□□□ -0.52
HDAC3-204ENST00000469207 KCTD11Q693B1 232 aa11.83□□□□□ -0.52
HDAC3-204ENST00000469207 RHBDD2Q6NTF9 364 aa11.83□□□□□ -0.52
HDAC3-204ENST00000469207 C11orf63Q6NUN7 778 aa11.83□□□□□ -0.52
HDAC3-204ENST00000469207 PPP1R32Q7Z5V6 425 aa11.83□□□□□ -0.52
HDAC3-204ENST00000469207 RAB43Q86YS6 212 aa11.83□□□□□ -0.52
HDAC3-204ENST00000469207 CNGA4Q8IV77 575 aa11.83□□□□□ -0.52
HDAC3-204ENST00000469207 CDKL3Q8IVW4 592 aaPredicted RBP11.83□□□□□ -0.52
HDAC3-204ENST00000469207 DNAJC22Q8N4W6 341 aa11.83□□□□□ -0.52
HDAC3-204ENST00000469207 HEXDCQ8WVB3 486 aa11.83□□□□□ -0.52
HDAC3-204ENST00000469207 ELMO1Q92556 727 aa11.83□□□□□ -0.52
HDAC3-204ENST00000469207 ALG3Q92685 438 aa11.83□□□□□ -0.52
HDAC3-204ENST00000469207 SLC22A11Q9NSA0 550 aa11.83□□□□□ -0.52
HDAC3-204ENST00000469207 P4HTMQ9NXG6 502 aa11.83□□□□□ -0.52
HDAC3-204ENST00000469207 IFT80Q9P2H3 777 aaPredicted RBP11.83□□□□□ -0.52
HDAC3-204ENST00000469207 IMPACTQ9P2X3 320 aa11.83□□□□□ -0.52
HDAC3-204ENST00000469207 G3BP2Q9UN86 482 aaKnown RBP11.83□□□□□ -0.52
HDAC3-204ENST00000469207 B3GNT3Q9Y2A9 372 aa11.83□□□□□ -0.52
HDAC3-204ENST00000469207 HIVEP3Q5T1R4 2406 aa11.82□□□□□ -0.52
HDAC3-204ENST00000469207 UNC79Q9P2D8 2635 aa11.82□□□□□ -0.52
HDAC3-204ENST00000469207 ISM1B1AKI9 464 aa11.82□□□□□ -0.52
HDAC3-204ENST00000469207 PJA2O43164 708 aa11.82□□□□□ -0.52
HDAC3-204ENST00000469207 OR1I1O60431 355 aa11.82□□□□□ -0.52
HDAC3-204ENST00000469207 LDLRP01130 860 aa11.82□□□□□ -0.52
HDAC3-204ENST00000469207 HBQ1P09105 142 aa11.82□□□□□ -0.52
HDAC3-204ENST00000469207 ALAS2P22557 587 aa11.82□□□□□ -0.52
HDAC3-204ENST00000469207 DCTP40126 519 aa11.82□□□□□ -0.52
HDAC3-204ENST00000469207 FOLR3P41439 243 aa11.82□□□□□ -0.52
HDAC3-204ENST00000469207 GRIA3P42263 894 aa11.82□□□□□ -0.52
HDAC3-204ENST00000469207 GDF10P55107 478 aa11.82□□□□□ -0.52
HDAC3-204ENST00000469207 COPS2P61201 443 aa11.82□□□□□ -0.52
HDAC3-204ENST00000469207 DCDP81605 110 aaKnown RBP11.82□□□□□ -0.52
HDAC3-204ENST00000469207 RPA4Q13156 261 aa11.82□□□□□ -0.52
HDAC3-204ENST00000469207 MYBPC3Q14896 1274 aa11.82□□□□□ -0.52
HDAC3-204ENST00000469207 VWA5B1Q5TIE3 1220 aa11.82□□□□□ -0.52
HDAC3-204ENST00000469207 MRPL14Q6P1L8 145 aaKnown RBP11.82□□□□□ -0.52
HDAC3-204ENST00000469207 SHISA6Q6ZSJ9 500 aa11.82□□□□□ -0.52
HDAC3-204ENST00000469207 CUZD1Q86UP6 607 aa11.82□□□□□ -0.52
HDAC3-204ENST00000469207 HOOK3Q86VS8 718 aa11.82□□□□□ -0.52
HDAC3-204ENST00000469207 IQCKQ8N0W5 287 aa11.82□□□□□ -0.52
HDAC3-204ENST00000469207 DTWD1Q8N5C7 304 aa11.82□□□□□ -0.52
HDAC3-204ENST00000469207 FAM71DQ8N9W8 422 aa11.82□□□□□ -0.52
HDAC3-204ENST00000469207 ZDHHC19Q8WVZ1 309 aaPredicted RBP11.82□□□□□ -0.52
HDAC3-204ENST00000469207 DPH2Q9BQC3 489 aaPredicted RBP11.82□□□□□ -0.52
HDAC3-204ENST00000469207 MESP1Q9BRJ9 268 aa11.82□□□□□ -0.52
HDAC3-204ENST00000469207 DHRS4Q9BTZ2 278 aa11.82□□□□□ -0.52
HDAC3-204ENST00000469207 SLC29A3Q9BZD2 475 aa11.82□□□□□ -0.52
HDAC3-204ENST00000469207 IRAK4Q9NWZ3 460 aa11.82□□□□□ -0.52
HDAC3-204ENST00000469207 C5AR2Q9P296 337 aa11.82□□□□□ -0.52
HDAC3-204ENST00000469207 GPN3Q9UHW5 284 aaPredicted RBP11.82□□□□□ -0.52
HDAC3-204ENST00000469207 COPG1Q9Y678 874 aaKnown RBP11.82□□□□□ -0.52
HDAC3-204ENST00000469207 A0A0J9YY10 115 aa11.81□□□□□ -0.52
HDAC3-204ENST00000469207 SLC5A10A0PJK1 596 aa11.81□□□□□ -0.52
HDAC3-204ENST00000469207 CCDC162PA2VCL2 907 aa11.81□□□□□ -0.52
HDAC3-204ENST00000469207 ANKUB1A6NFN9 424 aa11.81□□□□□ -0.52
HDAC3-204ENST00000469207 H7C0S8 307 aa11.81□□□□□ -0.52
HDAC3-204ENST00000469207 PEX12O00623 359 aa11.81□□□□□ -0.52
HDAC3-204ENST00000469207 STK10O94804 968 aaKnown RBP11.81□□□□□ -0.52
HDAC3-204ENST00000469207 DDAH2O95865 285 aa11.81□□□□□ -0.52
HDAC3-204ENST00000469207 ITGAXP20702 1163 aa11.81□□□□□ -0.52
HDAC3-204ENST00000469207 MSNP26038 577 aaKnown RBP11.81□□□□□ -0.52
HDAC3-204ENST00000469207 NAP1L1P55209 391 aaKnown RBP11.81□□□□□ -0.52
HDAC3-204ENST00000469207 CACNG1Q06432 222 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms