RNA–Protein interactions for RNA: ENST00000467789.5

SSR3-205, Transcript of signal sequence receptor subunit 3, humanhuman

TSL 2 BASIC

Gene SSR3, Length 1,039 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3-205ENST00000467789 KPNA5O15131 536 aa10.04□□□□□ -0.8
SSR3-205ENST00000467789 PFDN6O15212 129 aa10.04□□□□□ -0.8
SSR3-205ENST00000467789 TIAF1O95411 115 aa10.04□□□□□ -0.8
SSR3-205ENST00000467789 HBQ1P09105 142 aa10.04□□□□□ -0.8
SSR3-205ENST00000467789 PRSS56P0CW18 603 aa10.04□□□□□ -0.8
SSR3-205ENST00000467789 F8A1P23610 371 aa10.04□□□□□ -0.8
SSR3-205ENST00000467789 ACADLP28330 430 aa10.04□□□□□ -0.8
SSR3-205ENST00000467789 PREPP48147 710 aa10.04□□□□□ -0.8
SSR3-205ENST00000467789 SARNPP82979 210 aaKnown RBP10.04□□□□□ -0.8
SSR3-205ENST00000467789 PRR20EP86478 221 aa10.04□□□□□ -0.8
SSR3-205ENST00000467789 PRR20CP86479 221 aa10.04□□□□□ -0.8
SSR3-205ENST00000467789 PRR20DP86480 221 aa10.04□□□□□ -0.8
SSR3-205ENST00000467789 PRR20BP86481 221 aa10.04□□□□□ -0.8
SSR3-205ENST00000467789 PRR20AP86496 221 aa10.04□□□□□ -0.8
SSR3-205ENST00000467789 GPR19Q15760 415 aa10.04□□□□□ -0.8
SSR3-205ENST00000467789 DEFB109BQ30KR1 87 aa10.04□□□□□ -0.8
SSR3-205ENST00000467789 DNAJC21Q5F1R6 531 aaKnown RBP10.04□□□□□ -0.8
SSR3-205ENST00000467789 IZUMO3Q5VZ72 239 aa10.04□□□□□ -0.8
SSR3-205ENST00000467789 C16orf46Q6P387 395 aa10.04□□□□□ -0.8
SSR3-205ENST00000467789 SPESP1Q6UW49 350 aa10.04□□□□□ -0.8
SSR3-205ENST00000467789 PRICKLE2Q7Z3G6 844 aa10.04□□□□□ -0.8
SSR3-205ENST00000467789 SYVN1Q86TM6 617 aa10.04□□□□□ -0.8
SSR3-205ENST00000467789 HOOK3Q86VS8 718 aa10.04□□□□□ -0.8
SSR3-205ENST00000467789 LRRC6Q86X45 466 aa10.04□□□□□ -0.8
SSR3-205ENST00000467789 ADGRF3Q8IZF5 1079 aa10.04□□□□□ -0.8
SSR3-205ENST00000467789 PHC3Q8NDX5 983 aa10.04□□□□□ -0.8
SSR3-205ENST00000467789 C9orf43Q8TAL5 461 aaPredicted RBP10.04□□□□□ -0.8
SSR3-205ENST00000467789 CT55Q8WUE5 264 aa10.04□□□□□ -0.8
SSR3-205ENST00000467789 THAP4Q8WY91 577 aa10.04□□□□□ -0.8
SSR3-205ENST00000467789 PANX3Q96QZ0 392 aa10.04□□□□□ -0.8
SSR3-205ENST00000467789 HGH1Q9BTY7 390 aa10.04□□□□□ -0.8
SSR3-205ENST00000467789 CATSPERZQ9NTU4 200 aa10.04□□□□□ -0.8
SSR3-205ENST00000467789 ANAPC2Q9UJX6 822 aa10.04□□□□□ -0.8
SSR3-205ENST00000467789 MRFAP1Q9Y605 127 aa10.04□□□□□ -0.8
SSR3-205ENST00000467789 KCNMB2Q9Y691 235 aa10.04□□□□□ -0.8
SSR3-205ENST00000467789 MKRN2OSH3BPM6 223 aa10.03□□□□□ -0.8
SSR3-205ENST00000467789 PRMT5O14744 637 aaPredicted RBP10.03□□□□□ -0.8
SSR3-205ENST00000467789 CD3EAPO15446 510 aaKnown RBP10.03□□□□□ -0.8
SSR3-205ENST00000467789 KATNA1O75449 491 aa10.03□□□□□ -0.8
SSR3-205ENST00000467789 GPC4O75487 556 aa10.03□□□□□ -0.8
SSR3-205ENST00000467789 NTRK1P04629 796 aa10.03□□□□□ -0.8
SSR3-205ENST00000467789 APOA4P06727 396 aa10.03□□□□□ -0.8
SSR3-205ENST00000467789 RAB40ALP0C0E4 278 aa10.03□□□□□ -0.8
SSR3-205ENST00000467789 ETS1P14921 441 aa10.03□□□□□ -0.8
SSR3-205ENST00000467789 TPSB2P20231 275 aa10.03□□□□□ -0.8
SSR3-205ENST00000467789 CYP2A7P20853 494 aa10.03□□□□□ -0.8
SSR3-205ENST00000467789 VARSP26640 1264 aaKnown RBP10.03□□□□□ -0.8
SSR3-205ENST00000467789 PTPN4P29074 926 aa10.03□□□□□ -0.8
SSR3-205ENST00000467789 GRIA1P42261 906 aa10.03□□□□□ -0.8
SSR3-205ENST00000467789 BASP1P80723 227 aaKnown RBP10.03□□□□□ -0.8
SSR3-205ENST00000467789 PRKG2Q13237 762 aa10.03□□□□□ -0.8
SSR3-205ENST00000467789 ERV3-1Q14264 604 aa10.03□□□□□ -0.8
SSR3-205ENST00000467789 KIR2DS3Q14952 304 aa10.03□□□□□ -0.8
SSR3-205ENST00000467789 LAPTM4AQ15012 233 aa10.03□□□□□ -0.8
SSR3-205ENST00000467789 TMED2Q15363 201 aa10.03□□□□□ -0.8
SSR3-205ENST00000467789 TPSAB1Q15661 275 aa10.03□□□□□ -0.8
SSR3-205ENST00000467789 UNC5DQ6UXZ4 953 aa10.03□□□□□ -0.8
SSR3-205ENST00000467789 ZNF534Q76KX8 674 aa10.03□□□□□ -0.8
SSR3-205ENST00000467789 APLFQ8IW19 511 aaPredicted RBP10.03□□□□□ -0.8
SSR3-205ENST00000467789 GPR135Q8IZ08 494 aa10.03□□□□□ -0.8
SSR3-205ENST00000467789 SLC22A15Q8IZD6 547 aa10.03□□□□□ -0.8
SSR3-205ENST00000467789 GLIS1Q8NBF1 620 aa10.03□□□□□ -0.8
SSR3-205ENST00000467789 OR5AR1Q8NGP9 310 aa10.03□□□□□ -0.8
SSR3-205ENST00000467789 SLC22A18Q96BI1 424 aa10.03□□□□□ -0.8
SSR3-205ENST00000467789 TCTN2Q96GX1 697 aa10.03□□□□□ -0.8
SSR3-205ENST00000467789 ZNF778Q96MU6 729 aa10.03□□□□□ -0.8
SSR3-205ENST00000467789 TRAPPC9Q96Q05 1148 aa10.03□□□□□ -0.8
SSR3-205ENST00000467789 NAP1L3Q99457 506 aaPredicted RBP10.03□□□□□ -0.8
SSR3-205ENST00000467789 C17orf62Q9BQA9 187 aa10.03□□□□□ -0.8
SSR3-205ENST00000467789 TWSG1Q9GZX9 223 aa10.03□□□□□ -0.8
SSR3-205ENST00000467789 ACTL8Q9H568 366 aa10.03□□□□□ -0.8
SSR3-205ENST00000467789 MRM3Q9HC36 420 aaKnown RBP10.03□□□□□ -0.8
SSR3-205ENST00000467789 CHRAC1Q9NRG0 131 aa10.03□□□□□ -0.8
SSR3-205ENST00000467789 TREX1Q9NSU2 369 aa10.03□□□□□ -0.8
SSR3-205ENST00000467789 ACTR10Q9NZ32 417 aa10.03□□□□□ -0.8
SSR3-205ENST00000467789 SLC2A6Q9UGQ3 507 aa10.03□□□□□ -0.8
SSR3-205ENST00000467789 ICKQ9UPZ9 632 aa10.03□□□□□ -0.8
SSR3-205ENST00000467789 FARSAQ9Y285 508 aaKnown RBP10.03□□□□□ -0.8
SSR3-205ENST00000467789 JRKLQ9Y4A0 524 aa10.03□□□□□ -0.8
SSR3-205ENST00000467789 MRPS18BQ9Y676 258 aaKnown RBP10.03□□□□□ -0.8
SSR3-205ENST00000467789 PRSS21Q9Y6M0 314 aa10.03□□□□□ -0.8
SSR3-205ENST00000467789 AP1M2Q9Y6Q5 423 aa10.03□□□□□ -0.8
SSR3-205ENST00000467789 MYO18BQ8IUG5 2567 aa10.02□□□□□ -0.81
SSR3-205ENST00000467789 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP10.02□□□□□ -0.81
SSR3-205ENST00000467789 TMEM150CB9EJG8 249 aa10.02□□□□□ -0.81
SSR3-205ENST00000467789 E7EQ34 232 aa10.02□□□□□ -0.81
SSR3-205ENST00000467789 MEN1O00255 615 aa10.02□□□□□ -0.81
SSR3-205ENST00000467789 CEP104O60308 925 aa10.02□□□□□ -0.81
SSR3-205ENST00000467789 OR1I1O60431 355 aa10.02□□□□□ -0.81
SSR3-205ENST00000467789 RFPL1O75677 317 aa10.02□□□□□ -0.81
SSR3-205ENST00000467789 FKBP9O95302 570 aa10.02□□□□□ -0.81
SSR3-205ENST00000467789 WISP1O95388 367 aa10.02□□□□□ -0.81
SSR3-205ENST00000467789 CHRM5P08912 532 aaPredicted RBP10.02□□□□□ -0.81
SSR3-205ENST00000467789 CD63P08962 238 aa10.02□□□□□ -0.81
SSR3-205ENST00000467789 ZSCAN5DPP0CG00 497 aa10.02□□□□□ -0.81
SSR3-205ENST00000467789 ST6GAL1P15907 406 aa10.02□□□□□ -0.81
SSR3-205ENST00000467789 RPS3P23396 243 aaKnown RBP eCLIP10.02□□□□□ -0.816e-11■■□□□ 14.2
SSR3-205ENST00000467789 CCR7P32248 378 aa10.02□□□□□ -0.81
SSR3-205ENST00000467789 ARCN1P48444 511 aaKnown RBP10.02□□□□□ -0.81
SSR3-205ENST00000467789 CSRP3P50461 194 aa10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms