RNA–Protein interactions for RNA: ENST00000467353.1

CPS1-205, Transcript of carbamoyl-phosphate synthase 1, humanhuman

TSL 3

Gene CPS1, Length 323 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPS1-205ENST00000467353 B4GALNT4Q76KP1 1039 aa4.1□□□□□ -1.75
CPS1-205ENST00000467353 CAMKMTQ7Z624 323 aa4.1□□□□□ -1.75
CPS1-205ENST00000467353 CDC20BQ86Y33 519 aa4.1□□□□□ -1.75
CPS1-205ENST00000467353 PHYKPLQ8IUZ5 450 aa4.1□□□□□ -1.75
CPS1-205ENST00000467353 CHERPQ8IWX8 916 aaKnown RBP4.1□□□□□ -1.75
CPS1-205ENST00000467353 UMODL1-AS1Q8N2C9 162 aa4.1□□□□□ -1.75
CPS1-205ENST00000467353 PYROXD2Q8N2H3 581 aa4.1□□□□□ -1.75
CPS1-205ENST00000467353 MARVELD2Q8N4S9 558 aa4.1□□□□□ -1.75
CPS1-205ENST00000467353 RTL3Q8N8U3 475 aaKnown RBP4.1□□□□□ -1.75
CPS1-205ENST00000467353 C1orf131Q8NDD1 294 aaKnown RBP4.1□□□□□ -1.75
CPS1-205ENST00000467353 PUM2Q8TB72 1066 aaKnown RBP eCLIP4.1□□□□□ -1.75
CPS1-205ENST00000467353 AGAP11Q8TF27 550 aa4.1□□□□□ -1.75
CPS1-205ENST00000467353 PHF10Q8WUB8 498 aaKnown RBP4.1□□□□□ -1.75
CPS1-205ENST00000467353 TMEM158Q8WZ71 300 aa4.1□□□□□ -1.75
CPS1-205ENST00000467353 PSMF1Q92530 271 aa4.1□□□□□ -1.75
CPS1-205ENST00000467353 HAS2Q92819 552 aa4.1□□□□□ -1.75
CPS1-205ENST00000467353 TBC1D31Q96DN5 1066 aa4.1□□□□□ -1.75
CPS1-205ENST00000467353 WDR89Q96FK6 387 aaPredicted RBP4.1□□□□□ -1.75
CPS1-205ENST00000467353 SCRN2Q96FV2 425 aa4.1□□□□□ -1.75
CPS1-205ENST00000467353 RMND5BQ96G75 393 aaPredicted RBP4.1□□□□□ -1.75
CPS1-205ENST00000467353 MAGED4Q96JG8 741 aa4.1□□□□□ -1.75
CPS1-205ENST00000467353 COX4I2Q96KJ9 171 aa4.1□□□□□ -1.75
CPS1-205ENST00000467353 PWWP2AQ96N64 755 aa4.1□□□□□ -1.75
CPS1-205ENST00000467353 WDR24Q96S15 920 aa4.1□□□□□ -1.75
CPS1-205ENST00000467353 SCAND2PQ9GZW5 306 aaPredicted RBP4.1□□□□□ -1.75
CPS1-205ENST00000467353 OSGEPL1Q9H4B0 414 aa4.1□□□□□ -1.75
CPS1-205ENST00000467353 RMI1Q9H9A7 625 aa4.1□□□□□ -1.75
CPS1-205ENST00000467353 ARFGAP3Q9NP61 516 aa4.1□□□□□ -1.75
CPS1-205ENST00000467353 PLCB1Q9NQ66 1216 aa4.1□□□□□ -1.75
CPS1-205ENST00000467353 RASSF1Q9NS23 344 aa4.1□□□□□ -1.75
CPS1-205ENST00000467353 FAM207AQ9NSI2 230 aaPredicted RBP4.1□□□□□ -1.75
CPS1-205ENST00000467353 HRASLS2Q9NWW9 162 aa4.1□□□□□ -1.75
CPS1-205ENST00000467353 IL17CQ9P0M4 197 aa4.1□□□□□ -1.75
CPS1-205ENST00000467353 LRFN1Q9P244 771 aa4.1□□□□□ -1.75
CPS1-205ENST00000467353 ATXN10Q9UBB4 475 aa4.1□□□□□ -1.75
CPS1-205ENST00000467353 TRIM10Q9UDY6 481 aa4.1□□□□□ -1.75
CPS1-205ENST00000467353 TMEM59LQ9UK28 342 aa4.1□□□□□ -1.75
CPS1-205ENST00000467353 STAP1Q9ULZ2 295 aa4.1□□□□□ -1.75
CPS1-205ENST00000467353 CDYLQ9Y232 598 aa4.1□□□□□ -1.75
CPS1-205ENST00000467353 WDR37Q9Y2I8 494 aa4.1□□□□□ -1.75
CPS1-205ENST00000467353 CHD5Q8TDI0 1954 aa4.1□□□□□ -1.75
CPS1-205ENST00000467353 ANK2Q01484 3957 aa4.1□□□□□ -1.75
CPS1-205ENST00000467353 ZANQ9Y493 2812 aa4.09□□□□□ -1.75
CPS1-205ENST00000467353 C17orf113A0A1B0GUU1 675 aa4.09□□□□□ -1.75
CPS1-205ENST00000467353 DYTNA2CJ06 578 aa4.09□□□□□ -1.75
CPS1-205ENST00000467353 OR5K3A6NET4 321 aa4.09□□□□□ -1.75
CPS1-205ENST00000467353 BECN2A8MW95 431 aa4.09□□□□□ -1.75
CPS1-205ENST00000467353 FADS2P1A8MWK0 482 aa4.09□□□□□ -1.75
CPS1-205ENST00000467353 E9PLN8 166 aa4.09□□□□□ -1.75
CPS1-205ENST00000467353 H7C1Q1 480 aa4.09□□□□□ -1.75
CPS1-205ENST00000467353 PMM2O15305 246 aa4.09□□□□□ -1.75
CPS1-205ENST00000467353 PALMO75781 387 aa4.09□□□□□ -1.75
CPS1-205ENST00000467353 FKBP9O95302 570 aa4.09□□□□□ -1.75
CPS1-205ENST00000467353 SCG5P05408 212 aa4.09□□□□□ -1.75
CPS1-205ENST00000467353 CTSBP07858 339 aa4.09□□□□□ -1.75
CPS1-205ENST00000467353 ZNF30P17039 623 aa4.09□□□□□ -1.75
CPS1-205ENST00000467353 MMP11P24347 488 aa4.09□□□□□ -1.75
CPS1-205ENST00000467353 IL4RP24394 825 aa4.09□□□□□ -1.75
CPS1-205ENST00000467353 EPHB2P29323 1055 aa4.09□□□□□ -1.75
CPS1-205ENST00000467353 USP8P40818 1118 aa4.09□□□□□ -1.75
CPS1-205ENST00000467353 PREPP48147 710 aa4.09□□□□□ -1.75
CPS1-205ENST00000467353 PAPOLAP51003 745 aaKnown RBP4.09□□□□□ -1.75
CPS1-205ENST00000467353 KPNA2P52292 529 aaKnown RBP4.09□□□□□ -1.75
CPS1-205ENST00000467353 NKX6-1P78426 367 aaPredicted RBP4.09□□□□□ -1.75
CPS1-205ENST00000467353 DCDP81605 110 aaKnown RBP4.09□□□□□ -1.75
CPS1-205ENST00000467353 RUNX1T1Q06455 604 aa4.09□□□□□ -1.75
CPS1-205ENST00000467353 TRAF2Q12933 501 aa4.09□□□□□ -1.75
CPS1-205ENST00000467353 KLF1Q13351 362 aaPredicted RBP4.09□□□□□ -1.75
CPS1-205ENST00000467353 OLIG2Q13516 323 aa4.09□□□□□ -1.75
CPS1-205ENST00000467353 STK38Q15208 465 aa4.09□□□□□ -1.75
CPS1-205ENST00000467353 C15orf59Q2T9L4 293 aaPredicted RBP4.09□□□□□ -1.75
CPS1-205ENST00000467353 PARP15Q460N3 678 aa4.09□□□□□ -1.75
CPS1-205ENST00000467353 C2CD6Q53TS8 623 aa4.09□□□□□ -1.75
CPS1-205ENST00000467353 IRAK1BP1Q5VVH5 260 aa4.09□□□□□ -1.75
CPS1-205ENST00000467353 LRRC66Q68CR7 880 aa4.09□□□□□ -1.75
CPS1-205ENST00000467353 HMBOX1Q6NT76 420 aa4.09□□□□□ -1.75
CPS1-205ENST00000467353 CRTC3Q6UUV7 619 aa4.09□□□□□ -1.75
CPS1-205ENST00000467353 WASH2PQ6VEQ5 465 aa4.09□□□□□ -1.75
CPS1-205ENST00000467353 C16orf47Q6ZP98 133 aaPredicted RBP4.09□□□□□ -1.75
CPS1-205ENST00000467353 ARHGAP36Q6ZRI8 547 aa4.09□□□□□ -1.75
CPS1-205ENST00000467353 CEP128Q6ZU80 1094 aa4.09□□□□□ -1.75
CPS1-205ENST00000467353 LHFPL2Q6ZUX7 228 aa4.09□□□□□ -1.75
CPS1-205ENST00000467353 FKBP9P1Q75LS8 142 aa4.09□□□□□ -1.75
CPS1-205ENST00000467353 ZDHHC17Q8IUH5 632 aa4.09□□□□□ -1.75
CPS1-205ENST00000467353 RBM12BQ8IXT5 1001 aaKnown RBP4.09□□□□□ -1.75
CPS1-205ENST00000467353 PPIL6Q8IXY8 311 aa4.09□□□□□ -1.75
CPS1-205ENST00000467353 ZZZ3Q8IYH5 903 aa4.09□□□□□ -1.75
CPS1-205ENST00000467353 CEP57L1Q8IYX8 460 aa4.09□□□□□ -1.75
CPS1-205ENST00000467353 CCDC185Q8N715 623 aa4.09□□□□□ -1.75
CPS1-205ENST00000467353 EMC1Q8N766 993 aa4.09□□□□□ -1.75
CPS1-205ENST00000467353 AMER2Q8N7J2 671 aa4.09□□□□□ -1.75
CPS1-205ENST00000467353 OR11G2Q8NGC1 345 aa4.09□□□□□ -1.75
CPS1-205ENST00000467353 GPR150Q8NGU9 434 aa4.09□□□□□ -1.75
CPS1-205ENST00000467353 CXorf40BQ96DE9 158 aa4.09□□□□□ -1.75
CPS1-205ENST00000467353 CELF6Q96J87 481 aaKnown RBP4.09□□□□□ -1.75
CPS1-205ENST00000467353 MCCC1Q96RQ3 725 aaPredicted RBP4.09□□□□□ -1.75
CPS1-205ENST00000467353 CD180Q99467 661 aa4.09□□□□□ -1.75
CPS1-205ENST00000467353 ARPC5LQ9BPX5 153 aa4.09□□□□□ -1.75
CPS1-205ENST00000467353 VKORC1Q9BQB6 163 aa4.09□□□□□ -1.75
CPS1-205ENST00000467353 GPATCH1Q9BRR8 931 aaKnown RBP4.09□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms