RNA–Protein interactions for RNA: ENST00000466781.5

HPS4-209, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 1 (best)

Gene HPS4, Length 6,136 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-209ENST00000466781 SLCO6A1Q86UG4 719 aa8.56□□□□□ -1.04
HPS4-209ENST00000466781 CREG2Q8IUH2 290 aa8.56□□□□□ -1.04
HPS4-209ENST00000466781 ZNF567Q8N184 647 aa8.56□□□□□ -1.04
HPS4-209ENST00000466781 OR10H4Q8NGA5 316 aa8.56□□□□□ -1.04
HPS4-209ENST00000466781 OR4K17Q8NGC6 315 aa8.56□□□□□ -1.04
HPS4-209ENST00000466781 OR52J3Q8NH60 311 aa8.56□□□□□ -1.04
HPS4-209ENST00000466781 DENND1AQ8TEH3 1009 aa8.56□□□□□ -1.04
HPS4-209ENST00000466781 ZSWIM3Q96MP5 696 aa8.56□□□□□ -1.04
HPS4-209ENST00000466781 OR2AG1Q9H205 316 aa8.56□□□□□ -1.04
HPS4-209ENST00000466781 GLS2Q9UI32 602 aa8.56□□□□□ -1.04
HPS4-209ENST00000466781 ZNF639Q9UID6 485 aa8.56□□□□□ -1.04
HPS4-209ENST00000466781 L7N2F9 121 aa8.56□□□□□ -1.04
HPS4-209ENST00000466781 GNB5O14775 395 aa8.56□□□□□ -1.04
HPS4-209ENST00000466781 TPST2O60704 377 aa8.56□□□□□ -1.04
HPS4-209ENST00000466781 PRH1P02810 166 aa8.56□□□□□ -1.04
HPS4-209ENST00000466781 VAMP2P63027 116 aa8.56□□□□□ -1.04
HPS4-209ENST00000466781 CLCQ05315 142 aa8.56□□□□□ -1.04
HPS4-209ENST00000466781 SNTA1Q13424 505 aa8.56□□□□□ -1.04
HPS4-209ENST00000466781 C4orf46Q504U0 113 aa8.56□□□□□ -1.04
HPS4-209ENST00000466781 IL23RQ5VWK5 629 aa8.56□□□□□ -1.04
HPS4-209ENST00000466781 ZNF548Q8NEK5 533 aaPredicted RBP8.56□□□□□ -1.04
HPS4-209ENST00000466781 DQX1Q8TE96 717 aaKnown RBP8.56□□□□□ -1.04
HPS4-209ENST00000466781 TNFAIP8L1Q8WVP5 186 aa8.56□□□□□ -1.04
HPS4-209ENST00000466781 PPM1MQ96MI6 270 aa8.56□□□□□ -1.04
HPS4-209ENST00000466781 POLR3BQ9NW08 1133 aaPredicted RBP8.56□□□□□ -1.04
HPS4-209ENST00000466781 GDAP2Q9NXN4 497 aa8.56□□□□□ -1.04
HPS4-209ENST00000466781 KLRF1Q9NZS2 232 aa8.56□□□□□ -1.04
HPS4-209ENST00000466781 TIMM22Q9Y584 194 aa8.56□□□□□ -1.04
HPS4-209ENST00000466781 PRORSD1PA6NEY8 169 aa8.56□□□□□ -1.04
HPS4-209ENST00000466781 MAGEB17A8MXT2 336 aa8.56□□□□□ -1.04
HPS4-209ENST00000466781 KLK3P07288 261 aaPredicted RBP8.56□□□□□ -1.04
HPS4-209ENST00000466781 MTHFD1P11586 935 aaKnown RBP8.56□□□□□ -1.04
HPS4-209ENST00000466781 ADH5P11766 374 aa8.56□□□□□ -1.04
HPS4-209ENST00000466781 ZNF8P17098 575 aaPredicted RBP8.56□□□□□ -1.04
HPS4-209ENST00000466781 S100A1P23297 94 aa8.56□□□□□ -1.04
HPS4-209ENST00000466781 HSD3B2P26439 372 aa8.56□□□□□ -1.04
HPS4-209ENST00000466781 CRHR1P34998 444 aa8.56□□□□□ -1.04
HPS4-209ENST00000466781 ARCN1P48444 511 aaKnown RBP8.56□□□□□ -1.04
HPS4-209ENST00000466781 MTTPP55157 894 aa8.56□□□□□ -1.04
HPS4-209ENST00000466781 TXNL4AP83876 142 aaKnown RBP8.56□□□□□ -1.04
HPS4-209ENST00000466781 ARMCX6Q7L4S7 300 aa8.56□□□□□ -1.04
HPS4-209ENST00000466781 CAND1Q86VP6 1230 aaKnown RBP8.56□□□□□ -1.04
HPS4-209ENST00000466781 UBE2J2Q8N2K1 259 aa8.56□□□□□ -1.04
HPS4-209ENST00000466781 AVL9Q8NBF6 648 aa8.56□□□□□ -1.04
HPS4-209ENST00000466781 KCT2Q8NC54 265 aa8.56□□□□□ -1.04
HPS4-209ENST00000466781 FAM13CQ8NE31 585 aa8.56□□□□□ -1.04
HPS4-209ENST00000466781 NXNL1Q96CM4 212 aa8.56□□□□□ -1.04
HPS4-209ENST00000466781 ZBED6CLQ96FA7 236 aaPredicted RBP8.56□□□□□ -1.04
HPS4-209ENST00000466781 B3GALT6Q96L58 329 aa8.56□□□□□ -1.04
HPS4-209ENST00000466781 TMA7Q9Y2S6 64 aaKnown RBP8.56□□□□□ -1.04
HPS4-209ENST00000466781 KCNU1A8MYU2 1149 aa8.56□□□□□ -1.04
HPS4-209ENST00000466781 ADAMDEC1O15204 470 aa8.56□□□□□ -1.04
HPS4-209ENST00000466781 CILPO75339 1184 aa8.56□□□□□ -1.04
HPS4-209ENST00000466781 UNC5CO95185 931 aa8.56□□□□□ -1.04
HPS4-209ENST00000466781 IL33O95760 270 aa8.56□□□□□ -1.04
HPS4-209ENST00000466781 RPL17P18621 184 aaKnown RBP8.56□□□□□ -1.04
HPS4-209ENST00000466781 PLA2G16P53816 162 aa8.56□□□□□ -1.04
HPS4-209ENST00000466781 IL10RBQ08334 325 aa8.56□□□□□ -1.04
HPS4-209ENST00000466781 RAB39AQ14964 217 aa8.56□□□□□ -1.04
HPS4-209ENST00000466781 TIGD5Q53EQ6 642 aa8.56□□□□□ -1.04
HPS4-209ENST00000466781 TNFAIP8L3Q5GJ75 292 aa8.56□□□□□ -1.04
HPS4-209ENST00000466781 THOC7Q6I9Y2 204 aaKnown RBP8.56□□□□□ -1.04
HPS4-209ENST00000466781 HSDL2Q6YN16 418 aa8.56□□□□□ -1.04
HPS4-209ENST00000466781 LNX2Q8N448 690 aa8.56□□□□□ -1.04
HPS4-209ENST00000466781 PLA2G15Q8NCC3 412 aa8.56□□□□□ -1.04
HPS4-209ENST00000466781 TMEM125Q96AQ2 219 aa8.56□□□□□ -1.04
HPS4-209ENST00000466781 ZNF570Q96NI8 536 aa8.56□□□□□ -1.04
HPS4-209ENST00000466781 PSKH2Q96QS6 385 aa8.56□□□□□ -1.04
HPS4-209ENST00000466781 ZNF717Q9BY31 904 aaPredicted RBP8.56□□□□□ -1.04
HPS4-209ENST00000466781 SLC25A51Q9H1U9 297 aa8.56□□□□□ -1.04
HPS4-209ENST00000466781 RNPEPL1Q9HAU8 725 aa8.56□□□□□ -1.04
HPS4-209ENST00000466781 ENY2Q9NPA8 101 aa8.56□□□□□ -1.04
HPS4-209ENST00000466781 TLR9Q9NR96 1032 aa8.56□□□□□ -1.04
HPS4-209ENST00000466781 WASF3Q9UPY6 502 aa8.56□□□□□ -1.04
HPS4-209ENST00000466781 FAM234BA2RU67 622 aa8.55□□□□□ -1.04
HPS4-209ENST00000466781 A8MU76 341 aa8.55□□□□□ -1.04
HPS4-209ENST00000466781 MUSKO15146 869 aa8.55□□□□□ -1.04
HPS4-209ENST00000466781 MATN3O15232 486 aa8.55□□□□□ -1.04
HPS4-209ENST00000466781 DNAJA2O60884 412 aa8.55□□□□□ -1.04
HPS4-209ENST00000466781 BPGMP07738 259 aa8.55□□□□□ -1.04
HPS4-209ENST00000466781 CSKP41240 450 aa8.55□□□□□ -1.04
HPS4-209ENST00000466781 ACTR1BP42025 376 aa8.55□□□□□ -1.04
HPS4-209ENST00000466781 ACTR1AP61163 376 aa8.55□□□□□ -1.04
HPS4-209ENST00000466781 HTRA3P83110 453 aa8.55□□□□□ -1.04
HPS4-209ENST00000466781 PITPNAQ00169 270 aa8.55□□□□□ -1.04
HPS4-209ENST00000466781 POU5F1Q01860 360 aaKnown RBP8.55□□□□□ -1.04
HPS4-209ENST00000466781 CCINQ13939 588 aa8.55□□□□□ -1.04
HPS4-209ENST00000466781 ARHGAP40Q5TG30 622 aa8.55□□□□□ -1.04
HPS4-209ENST00000466781 LINGO2Q7L985 606 aa8.55□□□□□ -1.04
HPS4-209ENST00000466781 OR2T34Q8NGX1 318 aa8.55□□□□□ -1.04
HPS4-209ENST00000466781 OR2T3Q8NH03 318 aa8.55□□□□□ -1.04
HPS4-209ENST00000466781 MCFD2Q8NI22 146 aa8.55□□□□□ -1.04
HPS4-209ENST00000466781 KIAA1143Q96AT1 154 aaPredicted RBP8.55□□□□□ -1.04
HPS4-209ENST00000466781 PHF12Q96QT6 1004 aa8.55□□□□□ -1.04
HPS4-209ENST00000466781 KXD1Q9BQD3 176 aa8.55□□□□□ -1.04
HPS4-209ENST00000466781 OR51V1Q9H2C8 321 aa8.55□□□□□ -1.04
HPS4-209ENST00000466781 ZNF282Q9UDV7 671 aaPredicted RBP8.55□□□□□ -1.04
HPS4-209ENST00000466781 C19orf25Q9UFG5 118 aaPredicted RBP8.55□□□□□ -1.04
HPS4-209ENST00000466781 PCDHGC3Q9UN70 934 aa8.55□□□□□ -1.04
HPS4-209ENST00000466781 C5P01031 1676 aa8.55□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms