RNA–Protein interactions for RNA: ENST00000466601.5

DNMT3A-208, Transcript of DNA methyltransferase 3 alpha, humanhuman

TSL 2

Gene DNMT3A, Length 812 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-208ENST00000466601 MSH2P43246 934 aa14.04□□□□□ -0.16
DNMT3A-208ENST00000466601 CAPZBP47756 277 aa14.04□□□□□ -0.16
DNMT3A-208ENST00000466601 ZFP36L1Q07352 338 aaKnown RBP14.04□□□□□ -0.16
DNMT3A-208ENST00000466601 TARDBPQ13148 414 aaKnown RBP eCLIP14.04□□□□□ -0.16
DNMT3A-208ENST00000466601 GRB7Q14451 532 aa14.04□□□□□ -0.16
DNMT3A-208ENST00000466601 ZNF460Q14592 562 aa14.04□□□□□ -0.16
DNMT3A-208ENST00000466601 ISXQ2M1V0 245 aa14.04□□□□□ -0.16
DNMT3A-208ENST00000466601 MROH9Q5TGP6 573 aa14.04□□□□□ -0.16
DNMT3A-208ENST00000466601 EMBQ6PCB8 327 aa14.04□□□□□ -0.16
DNMT3A-208ENST00000466601 ZNF574Q6ZN55 896 aaPredicted RBP14.04□□□□□ -0.16
DNMT3A-208ENST00000466601 AMIGO1Q86WK6 493 aa14.04□□□□□ -0.16
DNMT3A-208ENST00000466601 OOSP2Q86WS3 158 aa14.04□□□□□ -0.16
DNMT3A-208ENST00000466601 PLXDC1Q8IUK5 500 aa14.04□□□□□ -0.16
DNMT3A-208ENST00000466601 NKAPQ8N5F7 415 aaKnown RBP14.04□□□□□ -0.16
DNMT3A-208ENST00000466601 OR4D9Q8NGE8 314 aa14.04□□□□□ -0.16
DNMT3A-208ENST00000466601 AENQ8WTP8 325 aaKnown RBP14.04□□□□□ -0.16
DNMT3A-208ENST00000466601 ASB11Q8WXH4 323 aa14.04□□□□□ -0.16
DNMT3A-208ENST00000466601 RAD51AP1Q96B01 352 aa14.04□□□□□ -0.16
DNMT3A-208ENST00000466601 TMEM74Q96NL1 305 aa14.04□□□□□ -0.16
DNMT3A-208ENST00000466601 NRTNQ99748 197 aa14.04□□□□□ -0.16
DNMT3A-208ENST00000466601 SEMA6CQ9H3T2 930 aa14.04□□□□□ -0.16
DNMT3A-208ENST00000466601 GPAMQ9HCL2 828 aa14.04□□□□□ -0.16
DNMT3A-208ENST00000466601 HRASLS2Q9NWW9 162 aa14.04□□□□□ -0.16
DNMT3A-208ENST00000466601 TMEM9Q9P0T7 183 aa14.04□□□□□ -0.16
DNMT3A-208ENST00000466601 PLAGL1Q9UM63 463 aa14.04□□□□□ -0.16
DNMT3A-208ENST00000466601 WASF3Q9UPY6 502 aa14.04□□□□□ -0.16
DNMT3A-208ENST00000466601 ICKQ9UPZ9 632 aa14.04□□□□□ -0.16
DNMT3A-208ENST00000466601 UNC13CQ8NB66 2214 aa14.03□□□□□ -0.16
DNMT3A-208ENST00000466601 OR5K3A6NET4 321 aa14.03□□□□□ -0.16
DNMT3A-208ENST00000466601 ARHGEF33A8MVX0 844 aa14.03□□□□□ -0.16
DNMT3A-208ENST00000466601 TMX2-CTNND1H3BSU7 103 aa14.03□□□□□ -0.16
DNMT3A-208ENST00000466601 GFYI3L273 518 aa14.03□□□□□ -0.16
DNMT3A-208ENST00000466601 CAPN5O15484 640 aaPredicted RBP14.03□□□□□ -0.16
DNMT3A-208ENST00000466601 PHGDHO43175 533 aaKnown RBP14.03□□□□□ -0.16
DNMT3A-208ENST00000466601 ZBTB14O43829 449 aa14.03□□□□□ -0.16
DNMT3A-208ENST00000466601 MPSTP25325 297 aa14.03□□□□□ -0.16
DNMT3A-208ENST00000466601 SERPINB9P50453 376 aa14.03□□□□□ -0.16
DNMT3A-208ENST00000466601 PDX1P52945 283 aa14.03□□□□□ -0.16
DNMT3A-208ENST00000466601 INHBCP55103 352 aa14.03□□□□□ -0.16
DNMT3A-208ENST00000466601 RAB10P61026 200 aa14.03□□□□□ -0.16
DNMT3A-208ENST00000466601 BMPR2Q13873 1038 aa14.03□□□□□ -0.16
DNMT3A-208ENST00000466601 CCSMST1Q4G0I0 132 aa14.03□□□□□ -0.16
DNMT3A-208ENST00000466601 EEF1AKMT2Q5JPI9 291 aaKnown RBP14.03□□□□□ -0.16
DNMT3A-208ENST00000466601 ARMC6Q6NXE6 501 aa14.03□□□□□ -0.16
DNMT3A-208ENST00000466601 UBE2R2Q712K3 238 aaPredicted RBP14.03□□□□□ -0.16
DNMT3A-208ENST00000466601 B3GNT8Q7Z7M8 397 aa14.03□□□□□ -0.16
DNMT3A-208ENST00000466601 MARCH9Q86YJ5 346 aa14.03□□□□□ -0.16
DNMT3A-208ENST00000466601 RASGRP3Q8IV61 690 aa14.03□□□□□ -0.16
DNMT3A-208ENST00000466601 SLITRK4Q8IW52 837 aa14.03□□□□□ -0.16
DNMT3A-208ENST00000466601 DCAKDQ8WVC6 231 aa14.03□□□□□ -0.16
DNMT3A-208ENST00000466601 PDLIM5Q96HC4 596 aaKnown RBP14.03□□□□□ -0.16
DNMT3A-208ENST00000466601 TGM7Q96PF1 710 aa14.03□□□□□ -0.16
DNMT3A-208ENST00000466601 CCDC77Q9BR77 488 aa14.03□□□□□ -0.16
DNMT3A-208ENST00000466601 SCNM1Q9BWG6 230 aa14.03□□□□□ -0.16
DNMT3A-208ENST00000466601 RAB33BQ9H082 229 aa14.03□□□□□ -0.16
DNMT3A-208ENST00000466601 EPHA6Q9UF33 1036 aa14.03□□□□□ -0.16
DNMT3A-208ENST00000466601 CIDEBQ9UHD4 219 aa14.03□□□□□ -0.16
DNMT3A-208ENST00000466601 ZNF180Q9UJW8 692 aa14.03□□□□□ -0.16
DNMT3A-208ENST00000466601 KLK13Q9UKR3 277 aa14.03□□□□□ -0.16
DNMT3A-208ENST00000466601 ENTPD2Q9Y5L3 495 aa14.03□□□□□ -0.16
DNMT3A-208ENST00000466601 SPTBN4Q9H254 2564 aa14.03□□□□□ -0.16
DNMT3A-208ENST00000466601 MN1Q10571 1320 aaPredicted RBP14.02□□□□□ -0.17
DNMT3A-208ENST00000466601 IGHV5-10-1A0A0J9YXX1 117 aa14.02□□□□□ -0.17
DNMT3A-208ENST00000466601 MED19A0JLT2 244 aaPredicted RBP14.02□□□□□ -0.17
DNMT3A-208ENST00000466601 HMX2A2RU54 273 aa14.02□□□□□ -0.17
DNMT3A-208ENST00000466601 BTN3A3O00478 584 aa14.02□□□□□ -0.17
DNMT3A-208ENST00000466601 BTN3A1O00481 513 aa14.02□□□□□ -0.17
DNMT3A-208ENST00000466601 RASGRF2O14827 1237 aa14.02□□□□□ -0.17
DNMT3A-208ENST00000466601 WISP3O95389 354 aaPredicted RBP14.02□□□□□ -0.17
DNMT3A-208ENST00000466601 C9P02748 559 aa14.02□□□□□ -0.17
DNMT3A-208ENST00000466601 C8GP07360 202 aa14.02□□□□□ -0.17
DNMT3A-208ENST00000466601 POLR2CP19387 275 aaPredicted RBP14.02□□□□□ -0.17
DNMT3A-208ENST00000466601 SPINK2P20155 84 aa14.02□□□□□ -0.17
DNMT3A-208ENST00000466601 MAP4P27816 1152 aaKnown RBP14.02□□□□□ -0.17
DNMT3A-208ENST00000466601 PKLRP30613 574 aa14.02□□□□□ -0.17
DNMT3A-208ENST00000466601 CCKBRP32239 447 aa14.02□□□□□ -0.17
DNMT3A-208ENST00000466601 RAB28P51157 221 aa14.02□□□□□ -0.17
DNMT3A-208ENST00000466601 GFERP55789 205 aa14.02□□□□□ -0.17
DNMT3A-208ENST00000466601 PRKAA1Q13131 559 aa14.02□□□□□ -0.17
DNMT3A-208ENST00000466601 ZKSCAN8Q15776 578 aaPredicted RBP14.02□□□□□ -0.17
DNMT3A-208ENST00000466601 SNAP47Q5SQN1 464 aa14.02□□□□□ -0.17
DNMT3A-208ENST00000466601 PHF19Q5T6S3 580 aa14.02□□□□□ -0.17
DNMT3A-208ENST00000466601 IRGCQ6NXR0 463 aa14.02□□□□□ -0.17
DNMT3A-208ENST00000466601 RAPH1Q70E73 1250 aa14.02□□□□□ -0.17
DNMT3A-208ENST00000466601 TAOK1Q7L7X3 1001 aa14.02□□□□□ -0.17
DNMT3A-208ENST00000466601 ADGRF3Q8IZF5 1079 aa14.02□□□□□ -0.17
DNMT3A-208ENST00000466601 FBXO15Q8NCQ5 510 aaPredicted RBP14.02□□□□□ -0.17
DNMT3A-208ENST00000466601 OR9A1PQ8NGU1 263 aa14.02□□□□□ -0.17
DNMT3A-208ENST00000466601 ANKRD49Q8WVL7 239 aa14.02□□□□□ -0.17
DNMT3A-208ENST00000466601 CAVIN3Q969G5 261 aa14.02□□□□□ -0.17
DNMT3A-208ENST00000466601 GRAMD1AQ96CP6 724 aa14.02□□□□□ -0.17
DNMT3A-208ENST00000466601 ZDHHC12Q96GR4 267 aa14.02□□□□□ -0.17
DNMT3A-208ENST00000466601 CCDC74BQ96LY2 380 aa14.02□□□□□ -0.17
DNMT3A-208ENST00000466601 IL17FQ96PD4 163 aa14.02□□□□□ -0.17
DNMT3A-208ENST00000466601 DHRS4Q9BTZ2 278 aa14.02□□□□□ -0.17
DNMT3A-208ENST00000466601 MENTQ9BUN1 341 aa14.02□□□□□ -0.17
DNMT3A-208ENST00000466601 OR6C2Q9NZP2 312 aa14.02□□□□□ -0.17
DNMT3A-208ENST00000466601 PDP2Q9P2J9 529 aa14.02□□□□□ -0.17
DNMT3A-208ENST00000466601 KLHL3Q9UH77 587 aa14.02□□□□□ -0.17
DNMT3A-208ENST00000466601 ADAMTS6Q9UKP5 1117 aa14.02□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms