RNA–Protein interactions for RNA: ENST00000466032.1

CHMP3-206, Transcript of charged multivesicular body protein 3, humanhuman

TSL 2

Gene CHMP3, Length 436 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-206ENST00000466032 C1QTNF3Q9BXJ4 246 aa5.88□□□□□ -1.47
CHMP3-206ENST00000466032 GSDMCQ9BYG8 508 aa5.88□□□□□ -1.47
CHMP3-206ENST00000466032 TPSD1Q9BZJ3 242 aa5.88□□□□□ -1.47
CHMP3-206ENST00000466032 ZDHHC5Q9C0B5 715 aa5.88□□□□□ -1.47
CHMP3-206ENST00000466032 PCBD2Q9H0N5 130 aa5.88□□□□□ -1.47
CHMP3-206ENST00000466032 SLC6A17Q9H1V8 727 aa5.88□□□□□ -1.47
CHMP3-206ENST00000466032 C6orf106Q9H6K1 298 aaPredicted RBP5.88□□□□□ -1.47
CHMP3-206ENST00000466032 MVB12BQ9H7P6 319 aa5.88□□□□□ -1.47
CHMP3-206ENST00000466032 MANSC1Q9H8J5 431 aa5.88□□□□□ -1.47
CHMP3-206ENST00000466032 COG4Q9H9E3 785 aa5.88□□□□□ -1.47
CHMP3-206ENST00000466032 CAB39LQ9H9S4 337 aa5.88□□□□□ -1.47
CHMP3-206ENST00000466032 CD320Q9NPF0 282 aa5.88□□□□□ -1.47
CHMP3-206ENST00000466032 MBNL1Q9NR56 388 aaKnown RBP5.88□□□□□ -1.47
CHMP3-206ENST00000466032 AASDHPPTQ9NRN7 309 aa5.88□□□□□ -1.47
CHMP3-206ENST00000466032 GPR27Q9NS67 375 aa5.88□□□□□ -1.47
CHMP3-206ENST00000466032 IGSF5Q9NSI5 407 aa5.88□□□□□ -1.47
CHMP3-206ENST00000466032 THAP1Q9NVV9 213 aa5.88□□□□□ -1.47
CHMP3-206ENST00000466032 UTP6Q9NYH9 597 aaKnown RBP5.88□□□□□ -1.47
CHMP3-206ENST00000466032 TMEM216Q9P0N5 145 aa5.88□□□□□ -1.47
CHMP3-206ENST00000466032 XPR1Q9UBH6 696 aa5.88□□□□□ -1.47
CHMP3-206ENST00000466032 ZNHIT2Q9UHR6 403 aa5.88□□□□□ -1.47
CHMP3-206ENST00000466032 LNPEPQ9UIQ6 1025 aa5.88□□□□□ -1.47
CHMP3-206ENST00000466032 PCOLCE2Q9UKZ9 415 aa5.88□□□□□ -1.47
CHMP3-206ENST00000466032 MED16Q9Y2X0 877 aa5.88□□□□□ -1.47
CHMP3-206ENST00000466032 PRSS21Q9Y6M0 314 aa5.88□□□□□ -1.47
CHMP3-206ENST00000466032 KIR2DS5A0A0G2JLQ3 304 aa5.87□□□□□ -1.47
CHMP3-206ENST00000466032 A0A0G2JNG1 304 aa5.87□□□□□ -1.47
CHMP3-206ENST00000466032 A0A1B0GTW7 788 aa5.87□□□□□ -1.47
CHMP3-206ENST00000466032 GMNCA6NCL1 334 aa5.87□□□□□ -1.47
CHMP3-206ENST00000466032 POM121BA6NF01 834 aa5.87□□□□□ -1.47
CHMP3-206ENST00000466032 ANTXRLA6NF34 631 aa5.87□□□□□ -1.47
CHMP3-206ENST00000466032 NEMP2A6NFY4 417 aa5.87□□□□□ -1.47
CHMP3-206ENST00000466032 TARM1B6A8C7 271 aa5.87□□□□□ -1.47
CHMP3-206ENST00000466032 KIR2DS3K7RE56 304 aa5.87□□□□□ -1.47
CHMP3-206ENST00000466032 TLR4O00206 839 aa5.87□□□□□ -1.47
CHMP3-206ENST00000466032 HGSO14964 777 aaPredicted RBP5.87□□□□□ -1.47
CHMP3-206ENST00000466032 VILLO15195 856 aa5.87□□□□□ -1.47
CHMP3-206ENST00000466032 BCAT2O15382 392 aaPredicted RBP5.87□□□□□ -1.47
CHMP3-206ENST00000466032 FFAR2O15552 330 aa5.87□□□□□ -1.47
CHMP3-206ENST00000466032 SGTAO43765 313 aa5.87□□□□□ -1.47
CHMP3-206ENST00000466032 PSIP1O75475 530 aaKnown RBP5.87□□□□□ -1.47
CHMP3-206ENST00000466032 PRSS56P0CW18 603 aa5.87□□□□□ -1.47
CHMP3-206ENST00000466032 TROVE2P10155 538 aaKnown RBP eCLIP5.87□□□□□ -1.47
CHMP3-206ENST00000466032 CTSEP14091 401 aa5.87□□□□□ -1.47
CHMP3-206ENST00000466032 GFAPP14136 432 aa5.87□□□□□ -1.47
CHMP3-206ENST00000466032 LSP1P33241 339 aa5.87□□□□□ -1.47
CHMP3-206ENST00000466032 GGT5P36269 586 aa5.87□□□□□ -1.47
CHMP3-206ENST00000466032 PEX19P40855 299 aa5.87□□□□□ -1.47
CHMP3-206ENST00000466032 HK3P52790 923 aa5.87□□□□□ -1.47
CHMP3-206ENST00000466032 CTSCP53634 463 aa5.87□□□□□ -1.47
CHMP3-206ENST00000466032 HERVK_113P63132 956 aa5.87□□□□□ -1.47
CHMP3-206ENST00000466032 ROR2Q01974 943 aaKnown RBP5.87□□□□□ -1.47
CHMP3-206ENST00000466032 CSTF1Q05048 431 aaKnown RBP5.87□□□□□ -1.47
CHMP3-206ENST00000466032 ZNF33BQ06732 778 aa5.87□□□□□ -1.47
CHMP3-206ENST00000466032 CDC16Q13042 620 aa5.87□□□□□ -1.47
CHMP3-206ENST00000466032 PRKAA1Q13131 559 aa5.87□□□□□ -1.47
CHMP3-206ENST00000466032 STX3Q13277 289 aa5.87□□□□□ -1.47
CHMP3-206ENST00000466032 KIR2DS5Q14953 304 aa5.87□□□□□ -1.47
CHMP3-206ENST00000466032 PCBP2Q15366 365 aaKnown RBP eCLIP5.87□□□□□ -1.47
CHMP3-206ENST00000466032 TGFBIQ15582 683 aa5.87□□□□□ -1.47
CHMP3-206ENST00000466032 UAP1L1Q3KQV9 507 aa5.87□□□□□ -1.47
CHMP3-206ENST00000466032 ZNF658BQ4V348 819 aaPredicted RBP5.87□□□□□ -1.47
CHMP3-206ENST00000466032 LYSMD4Q5XG99 296 aa5.87□□□□□ -1.47
CHMP3-206ENST00000466032 PMS2CLQ68D20 193 aa5.87□□□□□ -1.47
CHMP3-206ENST00000466032 ANKS6Q68DC2 871 aa5.87□□□□□ -1.47
CHMP3-206ENST00000466032 ENPP7Q6UWV6 458 aa5.87□□□□□ -1.47
CHMP3-206ENST00000466032 ABRAXAS1Q6UWZ7 409 aa5.87□□□□□ -1.47
CHMP3-206ENST00000466032 CYHR1Q6ZMK1 362 aa5.87□□□□□ -1.47
CHMP3-206ENST00000466032 GCNT7Q6ZNI0 430 aa5.87□□□□□ -1.47
CHMP3-206ENST00000466032 Q6ZSR6 202 aa5.87□□□□□ -1.47
CHMP3-206ENST00000466032 UBE2R2Q712K3 238 aaPredicted RBP5.87□□□□□ -1.47
CHMP3-206ENST00000466032 DET1Q7L5Y6 550 aa5.87□□□□□ -1.47
CHMP3-206ENST00000466032 CPLX4Q7Z7G2 160 aa5.87□□□□□ -1.47
CHMP3-206ENST00000466032 C11orf96Q7Z7L8 435 aa5.87□□□□□ -1.47
CHMP3-206ENST00000466032 PDZD3Q86UT5 571 aa5.87□□□□□ -1.47
CHMP3-206ENST00000466032 GKN2Q86XP6 184 aa5.87□□□□□ -1.47
CHMP3-206ENST00000466032 CRLF3Q8IUI8 442 aa5.87□□□□□ -1.47
CHMP3-206ENST00000466032 WDR75Q8IWA0 830 aaKnown RBP5.87□□□□□ -1.47
CHMP3-206ENST00000466032 DCUN1D3Q8IWE4 304 aa5.87□□□□□ -1.47
CHMP3-206ENST00000466032 CPNE9Q8IYJ1 553 aa5.87□□□□□ -1.47
CHMP3-206ENST00000466032 CFAP206Q8IYR0 622 aa5.87□□□□□ -1.47
CHMP3-206ENST00000466032 FBXO39Q8N4B4 442 aa5.87□□□□□ -1.47
CHMP3-206ENST00000466032 ANKS4BQ8N8V4 417 aa5.87□□□□□ -1.47
CHMP3-206ENST00000466032 SETD7Q8WTS6 366 aaKnown RBP5.87□□□□□ -1.47
CHMP3-206ENST00000466032 UBTD2Q8WUN7 234 aa5.87□□□□□ -1.47
CHMP3-206ENST00000466032 SKA2Q8WVK7 121 aaPredicted RBP5.87□□□□□ -1.47
CHMP3-206ENST00000466032 ANKRD49Q8WVL7 239 aa5.87□□□□□ -1.47
CHMP3-206ENST00000466032 SNX19Q92543 992 aa5.87□□□□□ -1.47
CHMP3-206ENST00000466032 ZNF75CPQ92670 426 aaPredicted RBP5.87□□□□□ -1.47
CHMP3-206ENST00000466032 NELL1Q92832 810 aa5.87□□□□□ -1.47
CHMP3-206ENST00000466032 SH3KBP1Q96B97 665 aa5.87□□□□□ -1.47
CHMP3-206ENST00000466032 RSRC1Q96IZ7 334 aaKnown RBP5.87□□□□□ -1.47
CHMP3-206ENST00000466032 C7orf26Q96N11 449 aa5.87□□□□□ -1.47
CHMP3-206ENST00000466032 ATOH8Q96SQ7 321 aa5.87□□□□□ -1.47
CHMP3-206ENST00000466032 ERVK-6Q9BXR3 956 aa5.87□□□□□ -1.47
CHMP3-206ENST00000466032 PITPNM3Q9BZ71 974 aa5.87□□□□□ -1.47
CHMP3-206ENST00000466032 EPN3Q9H201 632 aa5.87□□□□□ -1.47
CHMP3-206ENST00000466032 STN1Q9H668 368 aaKnown RBP5.87□□□□□ -1.47
CHMP3-206ENST00000466032 ALG9Q9H6U8 611 aa5.87□□□□□ -1.47
CHMP3-206ENST00000466032 CARS2Q9HA77 564 aaKnown RBP5.87□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms