RNA–Protein interactions for RNA: ENST00000465229.5

EXOSC3-203, Transcript of exosome component 3, humanhuman

TSL 2

Gene EXOSC3, Length 1,625 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-203ENST00000465229 SYTL3Q4VX76 610 aa16.53■□□□□ 0.24
EXOSC3-203ENST00000465229 FBXW10Q5XX13 1052 aa16.53■□□□□ 0.24
EXOSC3-203ENST00000465229 CYB5D1Q6P9G0 228 aa16.53■□□□□ 0.24
EXOSC3-203ENST00000465229 SLC30A9Q6PML9 568 aa16.53■□□□□ 0.24
EXOSC3-203ENST00000465229 CYHR1Q6ZMK1 362 aa16.53■□□□□ 0.24
EXOSC3-203ENST00000465229 TBC1D1Q86TI0 1168 aaPredicted RBP16.53■□□□□ 0.24
EXOSC3-203ENST00000465229 FSTL5Q8N475 847 aaPredicted RBP16.53■□□□□ 0.24
EXOSC3-203ENST00000465229 SPATA6LQ8N4H0 392 aa16.53■□□□□ 0.24
EXOSC3-203ENST00000465229 STON2Q8WXE9 905 aa16.53■□□□□ 0.24
EXOSC3-203ENST00000465229 RAB3IPQ96QF0 476 aaPredicted RBP16.53■□□□□ 0.24
EXOSC3-203ENST00000465229 MRPL46Q9H2W6 279 aaKnown RBP16.53■□□□□ 0.24
EXOSC3-203ENST00000465229 OSGEPL1Q9H4B0 414 aa16.53■□□□□ 0.24
EXOSC3-203ENST00000465229 ACSL5Q9ULC5 683 aa16.53■□□□□ 0.24
EXOSC3-203ENST00000465229 TDRD6O60522 2096 aaKnown RBP16.53■□□□□ 0.24
EXOSC3-203ENST00000465229 H3BM21 787 aa16.52■□□□□ 0.24
EXOSC3-203ENST00000465229 FCHO1O14526 889 aa16.52■□□□□ 0.24
EXOSC3-203ENST00000465229 KHNYNO15037 678 aaKnown RBP16.52■□□□□ 0.24
EXOSC3-203ENST00000465229 MGRN1O60291 552 aa16.52■□□□□ 0.24
EXOSC3-203ENST00000465229 LYPLA1O75608 230 aaPredicted RBP16.52■□□□□ 0.24
EXOSC3-203ENST00000465229 CCDC166P0CW27 439 aa16.52■□□□□ 0.24
EXOSC3-203ENST00000465229 CBSLP0DN79 551 aa16.52■□□□□ 0.24
EXOSC3-203ENST00000465229 RPL10P27635 214 aaKnown RBP16.52■□□□□ 0.24
EXOSC3-203ENST00000465229 CBSP35520 551 aa16.52■□□□□ 0.24
EXOSC3-203ENST00000465229 ACTR1BP42025 376 aa16.52■□□□□ 0.24
EXOSC3-203ENST00000465229 ACTR1AP61163 376 aa16.52■□□□□ 0.24
EXOSC3-203ENST00000465229 ELF3P78545 371 aaPredicted RBP16.52■□□□□ 0.24
EXOSC3-203ENST00000465229 DLG1Q12959 904 aa16.52■□□□□ 0.24
EXOSC3-203ENST00000465229 RIPK1Q13546 671 aa16.52■□□□□ 0.24
EXOSC3-203ENST00000465229 AGAP9Q5VTM2 703 aa16.52■□□□□ 0.24
EXOSC3-203ENST00000465229 TCEAL6Q6IPX3 200 aa16.52■□□□□ 0.24
EXOSC3-203ENST00000465229 IL27RAQ6UWB1 636 aa16.52■□□□□ 0.24
EXOSC3-203ENST00000465229 SLC22A15Q8IZD6 547 aa16.52■□□□□ 0.24
EXOSC3-203ENST00000465229 LMX1AQ8TE12 382 aa16.52■□□□□ 0.24
EXOSC3-203ENST00000465229 GLMNQ92990 594 aa16.52■□□□□ 0.24
EXOSC3-203ENST00000465229 TCEAL3Q969E4 200 aa16.52■□□□□ 0.24
EXOSC3-203ENST00000465229 LINGO1Q96FE5 620 aa16.52■□□□□ 0.24
EXOSC3-203ENST00000465229 PDLIM5Q96HC4 596 aaKnown RBP16.52■□□□□ 0.24
EXOSC3-203ENST00000465229 NUSAP1Q9BXS6 441 aaKnown RBP16.52■□□□□ 0.24
EXOSC3-203ENST00000465229 GSDMCQ9BYG8 508 aa16.52■□□□□ 0.24
EXOSC3-203ENST00000465229 ZDHHC5Q9C0B5 715 aa16.52■□□□□ 0.24
EXOSC3-203ENST00000465229 DRC3Q9H069 523 aa16.52■□□□□ 0.24
EXOSC3-203ENST00000465229 OR52A5Q9H2C5 316 aa16.52■□□□□ 0.24
EXOSC3-203ENST00000465229 PRDM8Q9NQV8 689 aa16.52■□□□□ 0.24
EXOSC3-203ENST00000465229 SPASTQ9UBP0 616 aa16.52■□□□□ 0.24
EXOSC3-203ENST00000465229 TBC1D29Q9UFV1 150 aa16.52■□□□□ 0.24
EXOSC3-203ENST00000465229 HAO1Q9UJM8 370 aa16.52■□□□□ 0.24
EXOSC3-203ENST00000465229 LRP4O75096 1905 aa16.52■□□□□ 0.24
EXOSC3-203ENST00000465229 RIF1Q5UIP0 2472 aaKnown RBP16.52■□□□□ 0.24
EXOSC3-203ENST00000465229 ZFHX2Q9C0A1 2572 aaPredicted RBP16.52■□□□□ 0.23
EXOSC3-203ENST00000465229 TK2O00142 265 aa16.52■□□□□ 0.23
EXOSC3-203ENST00000465229 SDC3O75056 442 aa16.52■□□□□ 0.23
EXOSC3-203ENST00000465229 PIAS2O75928 621 aa16.52■□□□□ 0.23
EXOSC3-203ENST00000465229 SYPP08247 313 aa16.52■□□□□ 0.23
EXOSC3-203ENST00000465229 IDSP22304 550 aa16.52■□□□□ 0.23
EXOSC3-203ENST00000465229 PTPN4P29074 926 aa16.52■□□□□ 0.23
EXOSC3-203ENST00000465229 ARRB1P49407 418 aaPredicted RBP16.52■□□□□ 0.23
EXOSC3-203ENST00000465229 RGS4P49798 205 aa16.52■□□□□ 0.23
EXOSC3-203ENST00000465229 DNAJB13P59910 316 aa16.52■□□□□ 0.23
EXOSC3-203ENST00000465229 BNIP3Q12983 259 aa16.52■□□□□ 0.23
EXOSC3-203ENST00000465229 ELOCQ15369 112 aa16.52■□□□□ 0.23
EXOSC3-203ENST00000465229 PIWIL4Q7Z3Z4 852 aaKnown RBP16.52■□□□□ 0.23
EXOSC3-203ENST00000465229 TAF8Q7Z7C8 310 aa16.52■□□□□ 0.23
EXOSC3-203ENST00000465229 PACS2Q86VP3 889 aa16.52■□□□□ 0.23
EXOSC3-203ENST00000465229 NKAPQ8N5F7 415 aaKnown RBP16.52■□□□□ 0.23
EXOSC3-203ENST00000465229 ZNF548Q8NEK5 533 aaPredicted RBP16.52■□□□□ 0.23
EXOSC3-203ENST00000465229 SPDYE1Q8NFV5 336 aaPredicted RBP16.52■□□□□ 0.23
EXOSC3-203ENST00000465229 NXNL1Q96CM4 212 aa16.52■□□□□ 0.23
EXOSC3-203ENST00000465229 SLC7A6OSQ96CW6 309 aaPredicted RBP16.52■□□□□ 0.23
EXOSC3-203ENST00000465229 PTCD3Q96EY7 689 aaKnown RBP16.52■□□□□ 0.23
EXOSC3-203ENST00000465229 NSL1Q96IY1 281 aa16.52■□□□□ 0.23
EXOSC3-203ENST00000465229 SCYL1Q96KG9 808 aa16.52■□□□□ 0.23
EXOSC3-203ENST00000465229 GATA5Q9BWX5 397 aaPredicted RBP16.52■□□□□ 0.23
EXOSC3-203ENST00000465229 DPEP2Q9H4A9 486 aa16.52■□□□□ 0.23
EXOSC3-203ENST00000465229 GAREM1Q9H706 876 aa16.52■□□□□ 0.23
EXOSC3-203ENST00000465229 IL21RQ9HBE5 538 aa16.52■□□□□ 0.23
EXOSC3-203ENST00000465229 IGSF5Q9NSI5 407 aa16.52■□□□□ 0.23
EXOSC3-203ENST00000465229 UCKL1Q9NWZ5 548 aa16.52■□□□□ 0.23
EXOSC3-203ENST00000465229 TAAR2Q9P1P5 351 aa16.52■□□□□ 0.23
EXOSC3-203ENST00000465229 TSR3Q9UJK0 312 aaKnown RBP16.52■□□□□ 0.23
EXOSC3-203ENST00000465229 PSMD13Q9UNM6 376 aa16.52■□□□□ 0.23
EXOSC3-203ENST00000465229 WDR37Q9Y2I8 494 aa16.52■□□□□ 0.23
EXOSC3-203ENST00000465229 A0A1B0GTQ1 180 aa16.51■□□□□ 0.23
EXOSC3-203ENST00000465229 EIF3FO00303 357 aaPredicted RBP16.51■□□□□ 0.23
EXOSC3-203ENST00000465229 AQP9O43315 295 aa16.51■□□□□ 0.23
EXOSC3-203ENST00000465229 DFNA5O60443 496 aa16.51■□□□□ 0.23
EXOSC3-203ENST00000465229 SNX2O60749 519 aa16.51■□□□□ 0.23
EXOSC3-203ENST00000465229 EML2O95834 649 aa16.51■□□□□ 0.23
EXOSC3-203ENST00000465229 LMNAP02545 664 aaKnown RBP16.51■□□□□ 0.23
EXOSC3-203ENST00000465229 SERPINA6P08185 405 aa16.51■□□□□ 0.23
EXOSC3-203ENST00000465229 RBP1P09455 135 aa16.51■□□□□ 0.23
EXOSC3-203ENST00000465229 LTA4HP09960 611 aaKnown RBP16.51■□□□□ 0.23
EXOSC3-203ENST00000465229 KITP10721 976 aa16.51■□□□□ 0.23
EXOSC3-203ENST00000465229 ENO3P13929 434 aaPredicted RBP16.51■□□□□ 0.23
EXOSC3-203ENST00000465229 CALB2P22676 271 aa16.51■□□□□ 0.23
EXOSC3-203ENST00000465229 ARRB2P32121 409 aa16.51■□□□□ 0.23
EXOSC3-203ENST00000465229 SERPINB5P36952 375 aa16.51■□□□□ 0.23
EXOSC3-203ENST00000465229 KCNJ2P63252 427 aa16.51■□□□□ 0.23
EXOSC3-203ENST00000465229 CSHL1Q14406 222 aa16.51■□□□□ 0.23
EXOSC3-203ENST00000465229 KLC3Q6P597 504 aa16.51■□□□□ 0.23
EXOSC3-203ENST00000465229 SLC25A45Q8N413 288 aa16.51■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms