RNA–Protein interactions for RNA: ENST00000463818.1

SF3A1-205, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 2

Gene SF3A1, Length 583 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-205ENST00000463818 TRIM73Q86UV7 250 aa18.24■□□□□ 0.51
SF3A1-205ENST00000463818 ENDOVQ8N8Q3 282 aaKnown RBP18.24■□□□□ 0.51
SF3A1-205ENST00000463818 TEX19Q8NA77 164 aa18.24■□□□□ 0.51
SF3A1-205ENST00000463818 OR5K2Q8NHB8 316 aa18.24■□□□□ 0.51
SF3A1-205ENST00000463818 OR2A14Q96R47 310 aa18.24■□□□□ 0.51
SF3A1-205ENST00000463818 TRIM55Q9BYV6 548 aa18.24■□□□□ 0.51
SF3A1-205ENST00000463818 FAM60AQ9NP50 221 aa18.24■□□□□ 0.51
SF3A1-205ENST00000463818 SPHK1Q9NYA1 384 aa18.24■□□□□ 0.51
SF3A1-205ENST00000463818 DRG1Q9Y295 367 aaKnown RBP18.24■□□□□ 0.51
SF3A1-205ENST00000463818 E7EQ34 232 aa18.23■□□□□ 0.51
SF3A1-205ENST00000463818 F8W8V4 182 aa18.23■□□□□ 0.51
SF3A1-205ENST00000463818 ARHGAP6O43182 974 aa18.23■□□□□ 0.51
SF3A1-205ENST00000463818 ZNF749O43361 778 aa18.23■□□□□ 0.51
SF3A1-205ENST00000463818 CAPN1P07384 714 aa18.23■□□□□ 0.51
SF3A1-205ENST00000463818 CHRM5P08912 532 aaPredicted RBP18.23■□□□□ 0.51
SF3A1-205ENST00000463818 UGT2B7P16662 529 aa18.23■□□□□ 0.51
SF3A1-205ENST00000463818 CCR7P32248 378 aa18.23■□□□□ 0.51
SF3A1-205ENST00000463818 PPARGP37231 505 aaPredicted RBP18.23■□□□□ 0.51
SF3A1-205ENST00000463818 PRAMEP78395 509 aa18.23■□□□□ 0.51
SF3A1-205ENST00000463818 SEMA3AQ14563 771 aa18.23■□□□□ 0.51
SF3A1-205ENST00000463818 TCTN2Q96GX1 697 aa18.23■□□□□ 0.51
SF3A1-205ENST00000463818 SGSM3Q96HU1 749 aa18.23■□□□□ 0.51
SF3A1-205ENST00000463818 NLNQ9BYT8 704 aa18.23■□□□□ 0.51
SF3A1-205ENST00000463818 SLC7A5P2Q9GIP4 190 aa18.23■□□□□ 0.51
SF3A1-205ENST00000463818 CHRAC1Q9NRG0 131 aa18.23■□□□□ 0.51
SF3A1-205ENST00000463818 OR6C2Q9NZP2 312 aa18.23■□□□□ 0.51
SF3A1-205ENST00000463818 PLAGL1Q9UM63 463 aa18.23■□□□□ 0.51
SF3A1-205ENST00000463818 SNX7Q9UNH6 387 aa18.23■□□□□ 0.51
SF3A1-205ENST00000463818 ARGFXA6NJG6 315 aa18.22■□□□□ 0.51
SF3A1-205ENST00000463818 PDGFAP04085 211 aa18.22■□□□□ 0.51
SF3A1-205ENST00000463818 CCL11P51671 97 aa18.22■□□□□ 0.51
SF3A1-205ENST00000463818 SESN2P58004 480 aaPredicted RBP18.22■□□□□ 0.51
SF3A1-205ENST00000463818 FOXK1P85037 733 aa18.22■□□□□ 0.51
SF3A1-205ENST00000463818 HSPA14Q0VDF9 509 aa18.22■□□□□ 0.51
SF3A1-205ENST00000463818 ZIC1Q15915 447 aa18.22■□□□□ 0.51
SF3A1-205ENST00000463818 PTCHD3Q3KNS1 767 aa18.22■□□□□ 0.51
SF3A1-205ENST00000463818 PCID2Q5JVF3 399 aa18.22■□□□□ 0.51
SF3A1-205ENST00000463818 FAM69BQ5VUD6 431 aa18.22■□□□□ 0.51
SF3A1-205ENST00000463818 LDB1Q86U70 411 aaPredicted RBP18.22■□□□□ 0.51
SF3A1-205ENST00000463818 SYTL1Q8IYJ3 562 aa18.22■□□□□ 0.51
SF3A1-205ENST00000463818 C19orf47Q8N9M1 422 aaKnown RBP18.22■□□□□ 0.51
SF3A1-205ENST00000463818 PPHLN1Q8NEY8 458 aaKnown RBP18.22■□□□□ 0.51
SF3A1-205ENST00000463818 FLVCR1-AS1Q8TAF5 88 aa18.22■□□□□ 0.51
SF3A1-205ENST00000463818 N4BP2L2Q92802 583 aaPredicted RBP18.22■□□□□ 0.51
SF3A1-205ENST00000463818 PEX13Q92968 403 aa18.22■□□□□ 0.51
SF3A1-205ENST00000463818 CARD6Q9BX69 1037 aa18.22■□□□□ 0.51
SF3A1-205ENST00000463818 AP1M1Q9BXS5 423 aa18.22■□□□□ 0.51
SF3A1-205ENST00000463818 SPRTNQ9H040 489 aaPredicted RBP18.22■□□□□ 0.51
SF3A1-205ENST00000463818 ANAPC5Q9UJX4 755 aa18.22■□□□□ 0.51
SF3A1-205ENST00000463818 TCFL5Q9UL49 500 aa18.22■□□□□ 0.51
SF3A1-205ENST00000463818 IQCF5A8MTL0 148 aa18.21■□□□□ 0.51
SF3A1-205ENST00000463818 ISM1B1AKI9 464 aa18.21■□□□□ 0.51
SF3A1-205ENST00000463818 GPC4O75487 556 aa18.21■□□□□ 0.51
SF3A1-205ENST00000463818 HBQ1P09105 142 aa18.21■□□□□ 0.51
SF3A1-205ENST00000463818 SPTBP11277 2137 aa18.21■□□□□ 0.51
SF3A1-205ENST00000463818 CHAF1BQ13112 559 aa18.21■□□□□ 0.51
SF3A1-205ENST00000463818 DNAJC21Q5F1R6 531 aaKnown RBP18.21■□□□□ 0.51
SF3A1-205ENST00000463818 CPZQ66K79 652 aa18.21■□□□□ 0.51
SF3A1-205ENST00000463818 DRICH1Q6PGQ1 229 aaPredicted RBP18.21■□□□□ 0.51
SF3A1-205ENST00000463818 VRK3Q8IV63 474 aa18.21■□□□□ 0.51
SF3A1-205ENST00000463818 GPR135Q8IZ08 494 aa18.21■□□□□ 0.51
SF3A1-205ENST00000463818 SLC22A15Q8IZD6 547 aa18.21■□□□□ 0.51
SF3A1-205ENST00000463818 LKAAEAR1Q8TD35 194 aa18.21■□□□□ 0.51
SF3A1-205ENST00000463818 ADAMTS17Q8TE56 1095 aa18.21■□□□□ 0.51
SF3A1-205ENST00000463818 ING2Q9H160 280 aa18.21■□□□□ 0.51
SF3A1-205ENST00000463818 LZTFL1Q9NQ48 299 aa18.21■□□□□ 0.51
SF3A1-205ENST00000463818 ACSS2Q9NR19 701 aa18.21■□□□□ 0.51
SF3A1-205ENST00000463818 A0A0J9YY10 115 aa18.2■□□□□ 0.5
SF3A1-205ENST00000463818 HCRTR1O43613 425 aa18.2■□□□□ 0.5
SF3A1-205ENST00000463818 KDM1AO60341 852 aa18.2■□□□□ 0.5
SF3A1-205ENST00000463818 OR2B3O76000 313 aa18.2■□□□□ 0.5
SF3A1-205ENST00000463818 AGXTP21549 392 aa18.2■□□□□ 0.5
SF3A1-205ENST00000463818 PTGIRP43119 386 aa18.2■□□□□ 0.5
SF3A1-205ENST00000463818 GABRA4P48169 554 aa18.2■□□□□ 0.5
SF3A1-205ENST00000463818 AARS2Q5JTZ9 985 aaKnown RBP18.2■□□□□ 0.5
SF3A1-205ENST00000463818 FAM198BQ6UWH4 519 aa18.2■□□□□ 0.5
SF3A1-205ENST00000463818 GSTA5Q7RTV2 222 aa18.2■□□□□ 0.5
SF3A1-205ENST00000463818 CFAP61Q8NHU2 1237 aa18.2■□□□□ 0.5
SF3A1-205ENST00000463818 ASZ1Q8WWH4 475 aa18.2■□□□□ 0.5
SF3A1-205ENST00000463818 DPH2Q9BQC3 489 aaPredicted RBP18.2■□□□□ 0.5
SF3A1-205ENST00000463818 TSSK1BQ9BXA7 367 aa18.2■□□□□ 0.5
SF3A1-205ENST00000463818 CHRNA10Q9GZZ6 450 aa18.2■□□□□ 0.5
SF3A1-205ENST00000463818 EIF2B3Q9NR50 452 aaKnown RBP18.2■□□□□ 0.5
SF3A1-205ENST00000463818 CATSPERZQ9NTU4 200 aa18.2■□□□□ 0.5
SF3A1-205ENST00000463818 MARCH4Q9P2E8 410 aaPredicted RBP18.2■□□□□ 0.5
SF3A1-205ENST00000463818 CDYLQ9Y232 598 aa18.2■□□□□ 0.5
SF3A1-205ENST00000463818 H3BMH7 237 aa18.19■□□□□ 0.5
SF3A1-205ENST00000463818 PRMT5O14744 637 aaPredicted RBP18.19■□□□□ 0.5
SF3A1-205ENST00000463818 CD3EAPO15446 510 aaKnown RBP18.19■□□□□ 0.5
SF3A1-205ENST00000463818 FGGP02679 453 aa18.19■□□□□ 0.5
SF3A1-205ENST00000463818 CBSLP0DN79 551 aa18.19■□□□□ 0.5
SF3A1-205ENST00000463818 AOAHP28039 575 aa18.19■□□□□ 0.5
SF3A1-205ENST00000463818 PEBP1P30086 187 aaKnown RBP18.19■□□□□ 0.5
SF3A1-205ENST00000463818 CBSP35520 551 aa18.19■□□□□ 0.5
SF3A1-205ENST00000463818 KCNJ1P48048 391 aa18.19■□□□□ 0.5
SF3A1-205ENST00000463818 NPY2RP49146 381 aa18.19■□□□□ 0.5
SF3A1-205ENST00000463818 CRADDP78560 199 aa18.19■□□□□ 0.5
SF3A1-205ENST00000463818 BASP1P80723 227 aaKnown RBP18.19■□□□□ 0.5
SF3A1-205ENST00000463818 KIR2DS3Q14952 304 aa18.19■□□□□ 0.5
SF3A1-205ENST00000463818 KYNUQ16719 465 aa18.19■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms