RNA–Protein interactions for RNA: ENST00000463684.1

SMC1A-204, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 2

Gene SMC1A, Length 880 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-204ENST00000463684 ARL5AQ9Y689 179 aa13.95□□□□□ -0.18
SMC1A-204ENST00000463684 POLEQ07864 2286 aa13.95□□□□□ -0.18
SMC1A-204ENST00000463684 C2CD3Q4AC94 2353 aa13.94□□□□□ -0.18
SMC1A-204ENST00000463684 PDZD2O15018 2839 aa13.94□□□□□ -0.18
SMC1A-204ENST00000463684 HCRTR1O43613 425 aa13.94□□□□□ -0.18
SMC1A-204ENST00000463684 SERPINC1P01008 464 aa13.94□□□□□ -0.18
SMC1A-204ENST00000463684 SNRPB2P08579 225 aaKnown RBP13.94□□□□□ -0.18
SMC1A-204ENST00000463684 UGT2B7P16662 529 aa13.94□□□□□ -0.18
SMC1A-204ENST00000463684 HTR1EP28566 365 aa13.94□□□□□ -0.18
SMC1A-204ENST00000463684 GABRA4P48169 554 aa13.94□□□□□ -0.18
SMC1A-204ENST00000463684 NR1I3Q14994 352 aa13.94□□□□□ -0.18
SMC1A-204ENST00000463684 TAF1AQ15573 450 aaPredicted RBP13.94□□□□□ -0.18
SMC1A-204ENST00000463684 ZIC1Q15915 447 aa13.94□□□□□ -0.18
SMC1A-204ENST00000463684 VWA2Q5GFL6 755 aa13.94□□□□□ -0.18
SMC1A-204ENST00000463684 ISLR2Q6UXK2 745 aa13.94□□□□□ -0.18
SMC1A-204ENST00000463684 LINC00696Q6ZRV3 163 aa13.94□□□□□ -0.18
SMC1A-204ENST00000463684 ADGRG4Q8IZF6 3080 aa13.94□□□□□ -0.18
SMC1A-204ENST00000463684 OR1N1Q8NGS0 311 aa13.94□□□□□ -0.18
SMC1A-204ENST00000463684 ITLN2Q8WWU7 325 aaPredicted RBP13.94□□□□□ -0.18
SMC1A-204ENST00000463684 RNF25Q96BH1 459 aaPredicted RBP13.94□□□□□ -0.18
SMC1A-204ENST00000463684 THOC3Q96J01 351 aaKnown RBP13.94□□□□□ -0.18
SMC1A-204ENST00000463684 MAGEB10Q96LZ2 347 aaPredicted RBP13.94□□□□□ -0.18
SMC1A-204ENST00000463684 OR2A14Q96R47 310 aa13.94□□□□□ -0.18
SMC1A-204ENST00000463684 LMF1Q96S06 567 aa13.94□□□□□ -0.18
SMC1A-204ENST00000463684 COPS8Q99627 209 aa13.94□□□□□ -0.18
SMC1A-204ENST00000463684 MRM3Q9HC36 420 aaKnown RBP13.94□□□□□ -0.18
SMC1A-204ENST00000463684 FKBPLQ9UIM3 349 aa13.94□□□□□ -0.18
SMC1A-204ENST00000463684 PLCL2Q9UPR0 1127 aa13.94□□□□□ -0.18
SMC1A-204ENST00000463684 POLQO75417 2590 aa13.94□□□□□ -0.18
SMC1A-204ENST00000463684 CSMD2Q7Z408 3487 aa13.93□□□□□ -0.18
SMC1A-204ENST00000463684 A0A0J9YY10 115 aa13.93□□□□□ -0.18
SMC1A-204ENST00000463684 CCDC78A2IDD5 438 aa13.93□□□□□ -0.18
SMC1A-204ENST00000463684 C5orf60A6NFR6 353 aa13.93□□□□□ -0.18
SMC1A-204ENST00000463684 SOCS6O14544 535 aa13.93□□□□□ -0.18
SMC1A-204ENST00000463684 ALBP02768 609 aa13.93□□□□□ -0.18
SMC1A-204ENST00000463684 KRT1P04264 644 aa13.93□□□□□ -0.18
SMC1A-204ENST00000463684 PDHA2P29803 388 aa13.93□□□□□ -0.18
SMC1A-204ENST00000463684 SHMT2P34897 504 aa13.93□□□□□ -0.18
SMC1A-204ENST00000463684 ARSFP54793 590 aa13.93□□□□□ -0.18
SMC1A-204ENST00000463684 KCNK10P57789 538 aa13.93□□□□□ -0.18
SMC1A-204ENST00000463684 WASHC5Q12768 1159 aa13.93□□□□□ -0.18
SMC1A-204ENST00000463684 RPA4Q13156 261 aa13.93□□□□□ -0.18
SMC1A-204ENST00000463684 BOP1Q14137 746 aaKnown RBP13.93□□□□□ -0.18
SMC1A-204ENST00000463684 SLC5A12Q1EHB4 618 aa13.93□□□□□ -0.18
SMC1A-204ENST00000463684 TUBB8Q3ZCM7 444 aa13.93□□□□□ -0.18
SMC1A-204ENST00000463684 MTFR2Q6P444 385 aa13.93□□□□□ -0.18
SMC1A-204ENST00000463684 BNC2Q6ZN30 1099 aaPredicted RBP13.93□□□□□ -0.18
SMC1A-204ENST00000463684 UNC5AQ6ZN44 842 aa13.93□□□□□ -0.18
SMC1A-204ENST00000463684 OVCH1Q7RTY7 1134 aa13.93□□□□□ -0.18
SMC1A-204ENST00000463684 MRGPRGQ86SM5 289 aa13.93□□□□□ -0.18
SMC1A-204ENST00000463684 TMEM151BQ8IW70 566 aa13.93□□□□□ -0.18
SMC1A-204ENST00000463684 CATSPER1Q8NEC5 780 aa13.93□□□□□ -0.18
SMC1A-204ENST00000463684 FKBP10Q96AY3 582 aa13.93□□□□□ -0.18
SMC1A-204ENST00000463684 OXNAD1Q96HP4 312 aaPredicted RBP13.93□□□□□ -0.18
SMC1A-204ENST00000463684 VAT1Q99536 393 aa13.93□□□□□ -0.18
SMC1A-204ENST00000463684 WDR54Q9H977 334 aa13.93□□□□□ -0.18
SMC1A-204ENST00000463684 SAE1Q9UBE0 346 aaPredicted RBP13.93□□□□□ -0.18
SMC1A-204ENST00000463684 ICKQ9UPZ9 632 aa13.93□□□□□ -0.18
SMC1A-204ENST00000463684 TRGV8A0A0C4DH27 118 aa13.92□□□□□ -0.18
SMC1A-204ENST00000463684 AGAP14A8MT82 685 aa13.92□□□□□ -0.18
SMC1A-204ENST00000463684 PCDH17O14917 1159 aa13.92□□□□□ -0.18
SMC1A-204ENST00000463684 AGTP01019 485 aa13.92□□□□□ -0.18
SMC1A-204ENST00000463684 CTSBP07858 339 aa13.92□□□□□ -0.18
SMC1A-204ENST00000463684 CHRM5P08912 532 aaPredicted RBP13.92□□□□□ -0.18
SMC1A-204ENST00000463684 SPTBP11277 2137 aa13.92□□□□□ -0.18
SMC1A-204ENST00000463684 ITGALP20701 1170 aa13.92□□□□□ -0.18
SMC1A-204ENST00000463684 ZBED6P86452 979 aa13.92□□□□□ -0.18
SMC1A-204ENST00000463684 TYRO3Q06418 890 aa13.92□□□□□ -0.18
SMC1A-204ENST00000463684 MFAP5Q13361 173 aa13.92□□□□□ -0.18
SMC1A-204ENST00000463684 TFDP2Q14188 446 aa13.92□□□□□ -0.18
SMC1A-204ENST00000463684 RBBP7Q16576 425 aa13.92□□□□□ -0.18
SMC1A-204ENST00000463684 ZNF630Q2M218 657 aaPredicted RBP13.92□□□□□ -0.18
SMC1A-204ENST00000463684 KIRREL2Q6UWL6 708 aa13.92□□□□□ -0.18
SMC1A-204ENST00000463684 TMEM207Q6UWW9 146 aa13.92□□□□□ -0.18
SMC1A-204ENST00000463684 GFRALQ6UXV0 394 aa13.92□□□□□ -0.18
SMC1A-204ENST00000463684 TTLL10Q6ZVT0 673 aa13.92□□□□□ -0.18
SMC1A-204ENST00000463684 ZNF567Q8N184 647 aa13.92□□□□□ -0.18
SMC1A-204ENST00000463684 DNAJC22Q8N4W6 341 aa13.92□□□□□ -0.18
SMC1A-204ENST00000463684 ZNF808Q8N4W9 903 aaPredicted RBP13.92□□□□□ -0.18
SMC1A-204ENST00000463684 BPIFA3Q9BQP9 254 aa13.92□□□□□ -0.18
SMC1A-204ENST00000463684 FAM96AQ9H5X1 160 aa13.92□□□□□ -0.18
SMC1A-204ENST00000463684 SLC22A11Q9NSA0 550 aa13.92□□□□□ -0.18
SMC1A-204ENST00000463684 POLG2Q9UHN1 485 aa13.92□□□□□ -0.18
SMC1A-204ENST00000463684 HS3ST3B1Q9Y662 390 aa13.92□□□□□ -0.18
SMC1A-204ENST00000463684 A0A1B0GX78 115 aa13.91□□□□□ -0.18
SMC1A-204ENST00000463684 DYTNA2CJ06 578 aa13.91□□□□□ -0.18
SMC1A-204ENST00000463684 ISM1B1AKI9 464 aa13.91□□□□□ -0.18
SMC1A-204ENST00000463684 CCL21O00585 134 aa13.91□□□□□ -0.18
SMC1A-204ENST00000463684 CRTAMO95727 393 aa13.91□□□□□ -0.18
SMC1A-204ENST00000463684 ITGAXP20702 1163 aa13.91□□□□□ -0.18
SMC1A-204ENST00000463684 ARHGAP25P42331 645 aa13.91□□□□□ -0.18
SMC1A-204ENST00000463684 ARG2P78540 354 aa13.91□□□□□ -0.18
SMC1A-204ENST00000463684 TMPRSS15P98073 1019 aa13.91□□□□□ -0.18
SMC1A-204ENST00000463684 XIAPP98170 497 aa13.91□□□□□ -0.18
SMC1A-204ENST00000463684 NKG7Q16617 165 aa13.91□□□□□ -0.18
SMC1A-204ENST00000463684 LRRC38Q5VT99 294 aa13.91□□□□□ -0.18
SMC1A-204ENST00000463684 ZNF324BQ6AW86 544 aaPredicted RBP13.91□□□□□ -0.18
SMC1A-204ENST00000463684 RPTNQ6XPR3 784 aa13.91□□□□□ -0.18
SMC1A-204ENST00000463684 SNX20Q7Z614 316 aa13.91□□□□□ -0.18
SMC1A-204ENST00000463684 OR5AR1Q8NGP9 310 aa13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms