RNA–Protein interactions for RNA: ENST00000463615.1

PDLIM4-205, Transcript of PDZ and LIM domain 4, humanhuman

TSL 2

Gene PDLIM4, Length 582 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM4-205ENST00000463615 PCMTD2Q9NV79 361 aa19.88■□□□□ 0.77
PDLIM4-205ENST00000463615 SERTAD3Q9UJW9 196 aa19.88■□□□□ 0.77
PDLIM4-205ENST00000463615 CDYLQ9Y232 598 aa19.88■□□□□ 0.77
PDLIM4-205ENST00000463615 MAN2B2Q9Y2E5 1009 aa19.88■□□□□ 0.77
PDLIM4-205ENST00000463615 H3BMH7 237 aa19.87■□□□□ 0.77
PDLIM4-205ENST00000463615 KDM1AO60341 852 aa19.87■□□□□ 0.77
PDLIM4-205ENST00000463615 CAPN1P07384 714 aa19.87■□□□□ 0.77
PDLIM4-205ENST00000463615 HBQ1P09105 142 aa19.87■□□□□ 0.77
PDLIM4-205ENST00000463615 CCDC175P0C221 793 aa19.87■□□□□ 0.77
PDLIM4-205ENST00000463615 UGT2B7P16662 529 aa19.87■□□□□ 0.77
PDLIM4-205ENST00000463615 GABRA4P48169 554 aa19.87■□□□□ 0.77
PDLIM4-205ENST00000463615 PRAMEP78395 509 aa19.87■□□□□ 0.77
PDLIM4-205ENST00000463615 SEMA3AQ14563 771 aa19.87■□□□□ 0.77
PDLIM4-205ENST00000463615 FASTKD1Q53R41 847 aaKnown RBP19.87■□□□□ 0.77
PDLIM4-205ENST00000463615 PRAMEF17Q5VTA0 474 aa19.87■□□□□ 0.77
PDLIM4-205ENST00000463615 CDHR3Q6ZTQ4 885 aa19.87■□□□□ 0.77
PDLIM4-205ENST00000463615 PPHLN1Q8NEY8 458 aaKnown RBP19.87■□□□□ 0.77
PDLIM4-205ENST00000463615 OR6P1Q8NGX9 317 aa19.87■□□□□ 0.77
PDLIM4-205ENST00000463615 TCTN2Q96GX1 697 aa19.87■□□□□ 0.77
PDLIM4-205ENST00000463615 TSSK1BQ9BXA7 367 aa19.87■□□□□ 0.77
PDLIM4-205ENST00000463615 ACTR5Q9H9F9 607 aaPredicted RBP19.87■□□□□ 0.77
PDLIM4-205ENST00000463615 TREX1Q9NSU2 369 aa19.87■□□□□ 0.77
PDLIM4-205ENST00000463615 TLK1Q9UKI8 766 aa19.87■□□□□ 0.77
PDLIM4-205ENST00000463615 TP53TG5Q9Y2B4 290 aa19.87■□□□□ 0.77
PDLIM4-205ENST00000463615 CHRM5P08912 532 aaPredicted RBP19.86■□□□□ 0.77
PDLIM4-205ENST00000463615 PVRP15151 417 aa19.86■□□□□ 0.77
PDLIM4-205ENST00000463615 CCR7P32248 378 aa19.86■□□□□ 0.77
PDLIM4-205ENST00000463615 ITGA1P56199 1179 aa19.86■□□□□ 0.77
PDLIM4-205ENST00000463615 KLRB1Q12918 225 aa19.86■□□□□ 0.77
PDLIM4-205ENST00000463615 IL10RAQ13651 578 aa19.86■□□□□ 0.77
PDLIM4-205ENST00000463615 SLC5A12Q1EHB4 618 aa19.86■□□□□ 0.77
PDLIM4-205ENST00000463615 SYTL3Q4VX76 610 aa19.86■□□□□ 0.77
PDLIM4-205ENST00000463615 ZNF385CQ66K41 422 aaPredicted RBP19.86■□□□□ 0.77
PDLIM4-205ENST00000463615 MPP5Q8N3R9 675 aa19.86■□□□□ 0.77
PDLIM4-205ENST00000463615 C19orf47Q8N9M1 422 aaKnown RBP19.86■□□□□ 0.77
PDLIM4-205ENST00000463615 TRIM58Q8NG06 486 aa19.86■□□□□ 0.77
PDLIM4-205ENST00000463615 ASZ1Q8WWH4 475 aa19.86■□□□□ 0.77
PDLIM4-205ENST00000463615 IL22Q9GZX6 179 aa19.86■□□□□ 0.77
PDLIM4-205ENST00000463615 CHRAC1Q9NRG0 131 aa19.86■□□□□ 0.77
PDLIM4-205ENST00000463615 E7EQ34 232 aa19.85■□□□□ 0.77
PDLIM4-205ENST00000463615 PRMT5O14744 637 aaPredicted RBP19.85■□□□□ 0.77
PDLIM4-205ENST00000463615 SLCO2B1O94956 709 aa19.85■□□□□ 0.77
PDLIM4-205ENST00000463615 ZSCAN5DPP0CG00 497 aa19.85■□□□□ 0.77
PDLIM4-205ENST00000463615 CYP2A7P20853 494 aa19.85■□□□□ 0.77
PDLIM4-205ENST00000463615 NPY2RP49146 381 aa19.85■□□□□ 0.77
PDLIM4-205ENST00000463615 TTPAP49638 278 aa19.85■□□□□ 0.77
PDLIM4-205ENST00000463615 RPS18P62269 152 aaKnown RBP19.85■□□□□ 0.77
PDLIM4-205ENST00000463615 CDK16Q00536 496 aa19.85■□□□□ 0.77
PDLIM4-205ENST00000463615 KIR2DS3Q14952 304 aa19.85■□□□□ 0.77
PDLIM4-205ENST00000463615 KYNUQ16719 465 aa19.85■□□□□ 0.77
PDLIM4-205ENST00000463615 ARMC3Q5W041 872 aa19.85■□□□□ 0.77
PDLIM4-205ENST00000463615 LCN10Q6JVE6 187 aa19.85■□□□□ 0.77
PDLIM4-205ENST00000463615 FAM198BQ6UWH4 519 aa19.85■□□□□ 0.77
PDLIM4-205ENST00000463615 SYTL1Q8IYJ3 562 aa19.85■□□□□ 0.77
PDLIM4-205ENST00000463615 CLIP3Q96DZ5 547 aa19.85■□□□□ 0.77
PDLIM4-205ENST00000463615 MENTQ9BUN1 341 aa19.85■□□□□ 0.77
PDLIM4-205ENST00000463615 MRM3Q9HC36 420 aaKnown RBP19.85■□□□□ 0.77
PDLIM4-205ENST00000463615 FAM60AQ9NP50 221 aa19.85■□□□□ 0.77
PDLIM4-205ENST00000463615 MLXIPLQ9NP71 852 aa19.85■□□□□ 0.77
PDLIM4-205ENST00000463615 HOMER3Q9NSC5 361 aa19.85■□□□□ 0.77
PDLIM4-205ENST00000463615 SPHK1Q9NYA1 384 aa19.85■□□□□ 0.77
PDLIM4-205ENST00000463615 TCFL5Q9UL49 500 aa19.85■□□□□ 0.77
PDLIM4-205ENST00000463615 PCDHGA9Q9Y5G4 932 aaKnown RBP19.85■□□□□ 0.77
PDLIM4-205ENST00000463615 AP1M2Q9Y6Q5 423 aa19.85■□□□□ 0.77
PDLIM4-205ENST00000463615 A0A0J9YY10 115 aa19.84■□□□□ 0.77
PDLIM4-205ENST00000463615 FGGP02679 453 aa19.84■□□□□ 0.77
PDLIM4-205ENST00000463615 RPS3P23396 243 aaKnown RBP eCLIP19.84■□□□□ 0.77
PDLIM4-205ENST00000463615 AOAHP28039 575 aa19.84■□□□□ 0.77
PDLIM4-205ENST00000463615 FOXK1P85037 733 aa19.84■□□□□ 0.77
PDLIM4-205ENST00000463615 BRD3Q15059 726 aa19.84■□□□□ 0.77
PDLIM4-205ENST00000463615 ZIC1Q15915 447 aa19.84■□□□□ 0.77
PDLIM4-205ENST00000463615 PAPD7Q5XG87 772 aaKnown RBP19.84■□□□□ 0.77
PDLIM4-205ENST00000463615 UNC5DQ6UXZ4 953 aa19.84■□□□□ 0.77
PDLIM4-205ENST00000463615 NAPRTQ6XQN6 538 aa19.84■□□□□ 0.77
PDLIM4-205ENST00000463615 HOOK3Q86VS8 718 aa19.84■□□□□ 0.77
PDLIM4-205ENST00000463615 LRRC8AQ8IWT6 810 aa19.84■□□□□ 0.77
PDLIM4-205ENST00000463615 ENDOVQ8N8Q3 282 aaKnown RBP19.84■□□□□ 0.77
PDLIM4-205ENST00000463615 DHRS4Q9BTZ2 278 aa19.84■□□□□ 0.77
PDLIM4-205ENST00000463615 TRIM55Q9BYV6 548 aa19.84■□□□□ 0.77
PDLIM4-205ENST00000463615 P2RY12Q9H244 342 aa19.84■□□□□ 0.77
PDLIM4-205ENST00000463615 LZTFL1Q9NQ48 299 aa19.84■□□□□ 0.77
PDLIM4-205ENST00000463615 CATSPERZQ9NTU4 200 aa19.84■□□□□ 0.77
PDLIM4-205ENST00000463615 BFARQ9NZS9 450 aa19.84■□□□□ 0.77
PDLIM4-205ENST00000463615 MARCH4Q9P2E8 410 aaPredicted RBP19.84■□□□□ 0.77
PDLIM4-205ENST00000463615 ANAPC5Q9UJX4 755 aa19.84■□□□□ 0.77
PDLIM4-205ENST00000463615 NBASA2RRP1 2371 aa19.84■□□□□ 0.77
PDLIM4-205ENST00000463615 K7EM74 188 aa19.83■□□□□ 0.77
PDLIM4-205ENST00000463615 CD3EAPO15446 510 aaKnown RBP19.83■□□□□ 0.77
PDLIM4-205ENST00000463615 ZNF749O43361 778 aa19.83■□□□□ 0.77
PDLIM4-205ENST00000463615 RPN2P04844 631 aa19.83■□□□□ 0.77
PDLIM4-205ENST00000463615 TPSB2P20231 275 aa19.83■□□□□ 0.77
PDLIM4-205ENST00000463615 PKLRP30613 574 aa19.83■□□□□ 0.77
PDLIM4-205ENST00000463615 RAB28P51157 221 aa19.83■□□□□ 0.77
PDLIM4-205ENST00000463615 GRB7Q14451 532 aa19.83■□□□□ 0.77
PDLIM4-205ENST00000463615 TPSAB1Q15661 275 aa19.83■□□□□ 0.77
PDLIM4-205ENST00000463615 LRRC6Q86X45 466 aa19.83■□□□□ 0.77
PDLIM4-205ENST00000463615 VRK3Q8IV63 474 aa19.83■□□□□ 0.77
PDLIM4-205ENST00000463615 GPR135Q8IZ08 494 aa19.83■□□□□ 0.77
PDLIM4-205ENST00000463615 LKAAEAR1Q8TD35 194 aa19.83■□□□□ 0.77
PDLIM4-205ENST00000463615 C17orf62Q9BQA9 187 aa19.83■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms