RNA–Protein interactions for RNA: ENST00000462658.1

UBE4B-204, Transcript of ubiquitination factor E4B, humanhuman

TSL 3

Gene UBE4B, Length 573 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-204ENST00000462658 HSP90B2PQ58FF3 399 aa7.33□□□□□ -1.24
UBE4B-204ENST00000462658 FAM78AQ5JUQ0 283 aa7.33□□□□□ -1.24
UBE4B-204ENST00000462658 CEP85LQ5SZL2 805 aa7.33□□□□□ -1.24
UBE4B-204ENST00000462658 KCTD11Q693B1 232 aa7.33□□□□□ -1.24
UBE4B-204ENST00000462658 ZNF534Q76KX8 674 aa7.33□□□□□ -1.24
UBE4B-204ENST00000462658 TMEM25Q86YD3 366 aa7.33□□□□□ -1.24
UBE4B-204ENST00000462658 KLHDC8BQ8IXV7 354 aa7.33□□□□□ -1.24
UBE4B-204ENST00000462658 BBS5Q8N3I7 341 aa7.33□□□□□ -1.24
UBE4B-204ENST00000462658 FBXO36Q8NEA4 188 aa7.33□□□□□ -1.24
UBE4B-204ENST00000462658 SPATA22Q8NHS9 363 aa7.33□□□□□ -1.24
UBE4B-204ENST00000462658 MAFAQ8NHW3 353 aaPredicted RBP7.33□□□□□ -1.24
UBE4B-204ENST00000462658 FIBINQ8TAL6 211 aa7.33□□□□□ -1.24
UBE4B-204ENST00000462658 WFDC5Q8TCV5 224 aa7.33□□□□□ -1.24
UBE4B-204ENST00000462658 FGF13Q92913 245 aa7.33□□□□□ -1.24
UBE4B-204ENST00000462658 SMARCD2Q92925 531 aa7.33□□□□□ -1.24
UBE4B-204ENST00000462658 LRRC39Q96DD0 335 aa7.33□□□□□ -1.24
UBE4B-204ENST00000462658 PTCD3Q96EY7 689 aaKnown RBP7.33□□□□□ -1.24
UBE4B-204ENST00000462658 APIPQ96GX9 242 aa7.33□□□□□ -1.24
UBE4B-204ENST00000462658 OXNAD1Q96HP4 312 aaPredicted RBP7.33□□□□□ -1.24
UBE4B-204ENST00000462658 ZNF419Q96HQ0 510 aaPredicted RBP7.33□□□□□ -1.24
UBE4B-204ENST00000462658 CCDC77Q9BR77 488 aa7.33□□□□□ -1.24
UBE4B-204ENST00000462658 FEM1AQ9BSK4 669 aa7.33□□□□□ -1.24
UBE4B-204ENST00000462658 MLPHQ9BV36 600 aaPredicted RBP7.33□□□□□ -1.24
UBE4B-204ENST00000462658 SPATA5L1Q9BVQ7 753 aa7.33□□□□□ -1.24
UBE4B-204ENST00000462658 SARGQ9BW04 601 aa7.33□□□□□ -1.24
UBE4B-204ENST00000462658 DPH1Q9BZG8 443 aa7.33□□□□□ -1.24
UBE4B-204ENST00000462658 SLC25A51Q9H1U9 297 aa7.33□□□□□ -1.24
UBE4B-204ENST00000462658 LRRC40Q9H9A6 602 aa7.33□□□□□ -1.24
UBE4B-204ENST00000462658 VPS37BQ9H9H4 285 aa7.33□□□□□ -1.24
UBE4B-204ENST00000462658 PDFQ9HBH1 243 aa7.33□□□□□ -1.24
UBE4B-204ENST00000462658 SPHK2Q9NRA0 654 aa7.33□□□□□ -1.24
UBE4B-204ENST00000462658 HAUS2Q9NVX0 235 aa7.33□□□□□ -1.24
UBE4B-204ENST00000462658 GDE1Q9NZC3 331 aa7.33□□□□□ -1.24
UBE4B-204ENST00000462658 OGFRQ9NZT2 677 aa7.33□□□□□ -1.24
UBE4B-204ENST00000462658 UBA2Q9UBT2 640 aaPredicted RBP7.33□□□□□ -1.24
UBE4B-204ENST00000462658 VPS28Q9UK41 221 aa7.33□□□□□ -1.24
UBE4B-204ENST00000462658 CHMP2BQ9UQN3 213 aa7.33□□□□□ -1.24
UBE4B-204ENST00000462658 OR51B4Q9Y5P0 310 aa7.33□□□□□ -1.24
UBE4B-204ENST00000462658 DYNC1LI1Q9Y6G9 523 aaKnown RBP7.33□□□□□ -1.24
UBE4B-204ENST00000462658 TEX264Q9Y6I9 313 aa7.33□□□□□ -1.24
UBE4B-204ENST00000462658 NUP205Q92621 2012 aa7.33□□□□□ -1.24
UBE4B-204ENST00000462658 OBSL1O75147 1896 aa7.32□□□□□ -1.24
UBE4B-204ENST00000462658 A0A087WUV0 522 aaPredicted RBP7.32□□□□□ -1.24
UBE4B-204ENST00000462658 GOLGA6L10A6NI86 522 aa7.32□□□□□ -1.24
UBE4B-204ENST00000462658 SDR42E2A6NKP2 422 aa7.32□□□□□ -1.24
UBE4B-204ENST00000462658 NEDD8-MDP1E9PL57 170 aa7.32□□□□□ -1.24
UBE4B-204ENST00000462658 F5H697 171 aa7.32□□□□□ -1.24
UBE4B-204ENST00000462658 AP3B1O00203 1094 aa7.32□□□□□ -1.24
UBE4B-204ENST00000462658 FRS3O43559 492 aa7.32□□□□□ -1.24
UBE4B-204ENST00000462658 SNAP91O60641 907 aa7.32□□□□□ -1.24
UBE4B-204ENST00000462658 USP12O75317 370 aa7.32□□□□□ -1.24
UBE4B-204ENST00000462658 ZMPSTE24O75844 475 aa7.32□□□□□ -1.24
UBE4B-204ENST00000462658 SYF2O95926 243 aaKnown RBP7.32□□□□□ -1.24
UBE4B-204ENST00000462658 MT-CYBP00156 380 aaPredicted RBP7.32□□□□□ -1.24
UBE4B-204ENST00000462658 PENKP01210 267 aaPredicted RBP7.32□□□□□ -1.24
UBE4B-204ENST00000462658 ABHD2P08910 425 aa7.32□□□□□ -1.24
UBE4B-204ENST00000462658 TSHRP16473 764 aa7.32□□□□□ -1.24
UBE4B-204ENST00000462658 PHBP35232 272 aa7.32□□□□□ -1.24
UBE4B-204ENST00000462658 VIPR2P41587 438 aa7.32□□□□□ -1.24
UBE4B-204ENST00000462658 NPY2RP49146 381 aa7.32□□□□□ -1.24
UBE4B-204ENST00000462658 ZNF134P52741 427 aa7.32□□□□□ -1.24
UBE4B-204ENST00000462658 GPX6P59796 221 aa7.32□□□□□ -1.24
UBE4B-204ENST00000462658 MAXP61244 160 aa7.32□□□□□ -1.24
UBE4B-204ENST00000462658 NIPAL4Q0D2K0 466 aa7.32□□□□□ -1.24
UBE4B-204ENST00000462658 LMAN2Q12907 356 aa7.32□□□□□ -1.24
UBE4B-204ENST00000462658 KLF10Q13118 480 aa7.32□□□□□ -1.24
UBE4B-204ENST00000462658 MPP3Q13368 585 aa7.32□□□□□ -1.24
UBE4B-204ENST00000462658 OLIG2Q13516 323 aa7.32□□□□□ -1.24
UBE4B-204ENST00000462658 SLC12A1Q13621 1099 aa7.32□□□□□ -1.24
UBE4B-204ENST00000462658 CYTH1Q15438 398 aa7.32□□□□□ -1.24
UBE4B-204ENST00000462658 C3orf38Q5JPI3 329 aa7.32□□□□□ -1.24
UBE4B-204ENST00000462658 SP5Q6BEB4 398 aaPredicted RBP7.32□□□□□ -1.24
UBE4B-204ENST00000462658 NAPEPLDQ6IQ20 393 aa7.32□□□□□ -1.24
UBE4B-204ENST00000462658 CES5AQ6NT32 575 aa7.32□□□□□ -1.24
UBE4B-204ENST00000462658 Q6ZPA2 131 aa7.32□□□□□ -1.24
UBE4B-204ENST00000462658 C3orf62Q6ZUJ4 267 aa7.32□□□□□ -1.24
UBE4B-204ENST00000462658 GET4Q7L5D6 327 aaPredicted RBP7.32□□□□□ -1.24
UBE4B-204ENST00000462658 LINC00523Q86TU6 105 aa7.32□□□□□ -1.24
UBE4B-204ENST00000462658 PRPF39Q86UA1 669 aaKnown RBP7.32□□□□□ -1.24
UBE4B-204ENST00000462658 APCDD1Q8J025 514 aa7.32□□□□□ -1.24
UBE4B-204ENST00000462658 KRT222Q8N1A0 295 aa7.32□□□□□ -1.24
UBE4B-204ENST00000462658 MPP5Q8N3R9 675 aa7.32□□□□□ -1.24
UBE4B-204ENST00000462658 PGBD5Q8N414 524 aa7.32□□□□□ -1.24
UBE4B-204ENST00000462658 DNAAF3Q8N9W5 541 aa7.32□□□□□ -1.24
UBE4B-204ENST00000462658 DCAF4L2Q8NA75 395 aa7.32□□□□□ -1.24
UBE4B-204ENST00000462658 ATP11CQ8NB49 1132 aa7.32□□□□□ -1.24
UBE4B-204ENST00000462658 OR52K1Q8NGK4 314 aa7.32□□□□□ -1.24
UBE4B-204ENST00000462658 SNX19Q92543 992 aa7.32□□□□□ -1.24
UBE4B-204ENST00000462658 FUBP1Q96AE4 644 aaKnown RBP7.32□□□□□ -1.24
UBE4B-204ENST00000462658 ALG14Q96F25 216 aa7.32□□□□□ -1.24
UBE4B-204ENST00000462658 IMP4Q96G21 291 aaKnown RBP7.32□□□□□ -1.24
UBE4B-204ENST00000462658 Q96MF0 132 aa7.32□□□□□ -1.24
UBE4B-204ENST00000462658 LRRC3BQ96PB8 259 aa7.32□□□□□ -1.24
UBE4B-204ENST00000462658 EBNA1BP2Q99848 306 aaKnown RBP7.32□□□□□ -1.24
UBE4B-204ENST00000462658 SH3GL2Q99962 352 aa7.32□□□□□ -1.24
UBE4B-204ENST00000462658 TBL1YQ9BQ87 522 aa7.32□□□□□ -1.24
UBE4B-204ENST00000462658 WDR83Q9BRX9 315 aaKnown RBP7.32□□□□□ -1.24
UBE4B-204ENST00000462658 TMEM109Q9BVC6 243 aa7.32□□□□□ -1.24
UBE4B-204ENST00000462658 CINPQ9BW66 212 aaPredicted RBP7.32□□□□□ -1.24
UBE4B-204ENST00000462658 BBS2Q9BXC9 721 aa7.32□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms