RNA–Protein interactions for RNA: ENST00000462236.1

COPS3-204, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 5

Gene COPS3, Length 551 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-204ENST00000462236 DENND5BQ6ZUT9 1274 aa4.91□□□□□ -1.62
COPS3-204ENST00000462236 TMEM25Q86YD3 366 aa4.91□□□□□ -1.62
COPS3-204ENST00000462236 BBS7Q8IWZ6 715 aa4.91□□□□□ -1.62
COPS3-204ENST00000462236 GALNT16Q8N428 558 aa4.91□□□□□ -1.62
COPS3-204ENST00000462236 SYT2Q8N9I0 419 aaPredicted RBP4.91□□□□□ -1.62
COPS3-204ENST00000462236 OSR1Q8TAX0 266 aaPredicted RBP4.91□□□□□ -1.62
COPS3-204ENST00000462236 WASF1Q92558 559 aa4.91□□□□□ -1.62
COPS3-204ENST00000462236 ZNF560Q96MR9 790 aa4.91□□□□□ -1.62
COPS3-204ENST00000462236 FCRL5Q96RD9 977 aa4.91□□□□□ -1.62
COPS3-204ENST00000462236 FAM118BQ9BPY3 351 aa4.91□□□□□ -1.62
COPS3-204ENST00000462236 GPR174Q9BXC1 333 aa4.91□□□□□ -1.62
COPS3-204ENST00000462236 TRIM9Q9C026 710 aa4.91□□□□□ -1.62
COPS3-204ENST00000462236 WASH6PQ9NQA3 447 aa4.91□□□□□ -1.62
COPS3-204ENST00000462236 DDX43Q9NXZ2 648 aaKnown RBP4.91□□□□□ -1.62
COPS3-204ENST00000462236 KCND2Q9NZV8 630 aa4.91□□□□□ -1.62
COPS3-204ENST00000462236 DEC1Q9P2X7 70 aa4.91□□□□□ -1.62
COPS3-204ENST00000462236 THAP10Q9P2Z0 257 aaPredicted RBP4.91□□□□□ -1.62
COPS3-204ENST00000462236 SIX4Q9UIU6 781 aa4.91□□□□□ -1.62
COPS3-204ENST00000462236 SUFUQ9UMX1 484 aa4.91□□□□□ -1.62
COPS3-204ENST00000462236 DTX4Q9Y2E6 619 aa4.91□□□□□ -1.62
COPS3-204ENST00000462236 DNAJC16Q9Y2G8 782 aa4.91□□□□□ -1.62
COPS3-204ENST00000462236 NME7Q9Y5B8 376 aa4.91□□□□□ -1.62
COPS3-204ENST00000462236 PKDREJQ9NTG1 2253 aa4.91□□□□□ -1.62
COPS3-204ENST00000462236 CHD5Q8TDI0 1954 aa4.91□□□□□ -1.62
COPS3-204ENST00000462236 CCDC168Q8NDH2 2452 aa4.9□□□□□ -1.62
COPS3-204ENST00000462236 LRP4O75096 1905 aa4.9□□□□□ -1.62
COPS3-204ENST00000462236 MEI4A8MW99 385 aa4.9□□□□□ -1.63
COPS3-204ENST00000462236 ANKRD63C9JTQ0 380 aa4.9□□□□□ -1.63
COPS3-204ENST00000462236 H0YCG3 227 aa4.9□□□□□ -1.63
COPS3-204ENST00000462236 RRHO14718 337 aa4.9□□□□□ -1.63
COPS3-204ENST00000462236 COCHO43405 550 aa4.9□□□□□ -1.63
COPS3-204ENST00000462236 DFNA5O60443 496 aa4.9□□□□□ -1.63
COPS3-204ENST00000462236 ATP2C2O75185 946 aa4.9□□□□□ -1.63
COPS3-204ENST00000462236 PLAUP00749 431 aa4.9□□□□□ -1.63
COPS3-204ENST00000462236 ACP5P13686 325 aa4.9□□□□□ -1.63
COPS3-204ENST00000462236 CD38P28907 300 aa4.9□□□□□ -1.63
COPS3-204ENST00000462236 ADSSP30520 456 aa4.9□□□□□ -1.63
COPS3-204ENST00000462236 OXTRP30559 389 aa4.9□□□□□ -1.63
COPS3-204ENST00000462236 ACTN2P35609 894 aa4.9□□□□□ -1.63
COPS3-204ENST00000462236 HNF1BP35680 557 aa4.9□□□□□ -1.63
COPS3-204ENST00000462236 LHX1P48742 406 aa4.9□□□□□ -1.63
COPS3-204ENST00000462236 ACOT2P49753 483 aa4.9□□□□□ -1.63
COPS3-204ENST00000462236 LIG4P49917 911 aa4.9□□□□□ -1.63
COPS3-204ENST00000462236 TUBP50607 506 aa4.9□□□□□ -1.63
COPS3-204ENST00000462236 RPS6KA3P51812 740 aa4.9□□□□□ -1.63
COPS3-204ENST00000462236 UCNP55089 124 aa4.9□□□□□ -1.63
COPS3-204ENST00000462236 TMPRSS3P57727 454 aa4.9□□□□□ -1.63
COPS3-204ENST00000462236 GTF2BQ00403 316 aa4.9□□□□□ -1.63
COPS3-204ENST00000462236 MYL7Q01449 175 aa4.9□□□□□ -1.63
COPS3-204ENST00000462236 KHDRBS1Q07666 443 aaKnown RBP eCLIP4.9□□□□□ -1.63
COPS3-204ENST00000462236 GOLGA8FQ08AF8 430 aa4.9□□□□□ -1.63
COPS3-204ENST00000462236 CCDC173Q0VFZ6 552 aa4.9□□□□□ -1.63
COPS3-204ENST00000462236 ST3GAL1Q11201 340 aa4.9□□□□□ -1.63
COPS3-204ENST00000462236 TBL3Q12788 808 aaKnown RBP4.9□□□□□ -1.63
COPS3-204ENST00000462236 TAF10Q12962 218 aa4.9□□□□□ -1.63
COPS3-204ENST00000462236 PDCLQ13371 301 aa4.9□□□□□ -1.63
COPS3-204ENST00000462236 SLC12A1Q13621 1099 aa4.9□□□□□ -1.63
COPS3-204ENST00000462236 SOWAHAQ2M3V2 549 aa4.9□□□□□ -1.63
COPS3-204ENST00000462236 VWA5B1Q5TIE3 1220 aa4.9□□□□□ -1.63
COPS3-204ENST00000462236 CCDC70Q6NSX1 233 aa4.9□□□□□ -1.63
COPS3-204ENST00000462236 TFAP2DQ7Z6R9 452 aa4.9□□□□□ -1.63
COPS3-204ENST00000462236 CPOQ8IVL8 374 aa4.9□□□□□ -1.63
COPS3-204ENST00000462236 ADGRF2Q8IZF7 708 aa4.9□□□□□ -1.63
COPS3-204ENST00000462236 LRRC52Q8N7C0 313 aa4.9□□□□□ -1.63
COPS3-204ENST00000462236 SAP25Q8TEE9 199 aa4.9□□□□□ -1.63
COPS3-204ENST00000462236 MYLPFQ96A32 169 aa4.9□□□□□ -1.63
COPS3-204ENST00000462236 REEP2Q9BRK0 252 aa4.9□□□□□ -1.63
COPS3-204ENST00000462236 EFHD1Q9BUP0 239 aa4.9□□□□□ -1.63
COPS3-204ENST00000462236 NUP58Q9BVL2 599 aa4.9□□□□□ -1.63
COPS3-204ENST00000462236 C6orf106Q9H6K1 298 aaPredicted RBP4.9□□□□□ -1.63
COPS3-204ENST00000462236 TM9SF3Q9HD45 589 aa4.9□□□□□ -1.63
COPS3-204ENST00000462236 TMEM160Q9NX00 188 aa4.9□□□□□ -1.63
COPS3-204ENST00000462236 ANKMY1Q9P2S6 941 aa4.9□□□□□ -1.63
COPS3-204ENST00000462236 CDH9Q9ULB4 789 aa4.9□□□□□ -1.63
COPS3-204ENST00000462236 RCE1Q9Y256 329 aa4.9□□□□□ -1.63
COPS3-204ENST00000462236 PKP3Q9Y446 797 aa4.9□□□□□ -1.63
COPS3-204ENST00000462236 CYP46A1Q9Y6A2 500 aa4.9□□□□□ -1.63
COPS3-204ENST00000462236 VWA3AA6NCI4 1184 aa4.89□□□□□ -1.63
COPS3-204ENST00000462236 TMEM247A6NEH6 219 aa4.89□□□□□ -1.63
COPS3-204ENST00000462236 WIPF3A6NGB9 483 aa4.89□□□□□ -1.63
COPS3-204ENST00000462236 PP2D1A8MPX8 630 aa4.89□□□□□ -1.63
COPS3-204ENST00000462236 F8VP50 259 aa4.89□□□□□ -1.63
COPS3-204ENST00000462236 STX16-NPEPL1H3BU86 382 aa4.89□□□□□ -1.63
COPS3-204ENST00000462236 K7ENP7 123 aa4.89□□□□□ -1.63
COPS3-204ENST00000462236 PPP6CO00743 305 aa4.89□□□□□ -1.63
COPS3-204ENST00000462236 STX16O14662 325 aa4.89□□□□□ -1.63
COPS3-204ENST00000462236 SLC28A2O43868 658 aa4.89□□□□□ -1.63
COPS3-204ENST00000462236 PPFIA2O75334 1257 aa4.89□□□□□ -1.63
COPS3-204ENST00000462236 RBMXL2O75526 392 aaKnown RBP4.89□□□□□ -1.63
COPS3-204ENST00000462236 HLA-DQA2P01906 255 aa4.89□□□□□ -1.63
COPS3-204ENST00000462236 WNT1P04628 370 aa4.89□□□□□ -1.63
COPS3-204ENST00000462236 MBL2P11226 248 aaPredicted RBP4.89□□□□□ -1.63
COPS3-204ENST00000462236 ITGB6P18564 788 aa4.89□□□□□ -1.63
COPS3-204ENST00000462236 BDNFP23560 247 aa4.89□□□□□ -1.63
COPS3-204ENST00000462236 PRPH2P23942 346 aa4.89□□□□□ -1.63
COPS3-204ENST00000462236 LMO2P25791 158 aa4.89□□□□□ -1.63
COPS3-204ENST00000462236 ACSL1P33121 698 aa4.89□□□□□ -1.63
COPS3-204ENST00000462236 STAT1P42224 750 aa4.89□□□□□ -1.63
COPS3-204ENST00000462236 DNAJC3Q13217 504 aa4.89□□□□□ -1.63
COPS3-204ENST00000462236 ILKQ13418 452 aa4.89□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms