RNA–Protein interactions for RNA: ENST00000462030.5

HPS3-204, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 2

Gene HPS3, Length 2,486 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-204ENST00000462030 EIF3LQ9Y262 564 aaKnown RBP18.08■□□□□ 0.48
HPS3-204ENST00000462030 PCDHGC4Q9Y5F7 938 aa18.08■□□□□ 0.48
HPS3-204ENST00000462030 M0QX08 132 aa18.07■□□□□ 0.48
HPS3-204ENST00000462030 FADS2O95864 444 aaKnown RBP18.07■□□□□ 0.48
HPS3-204ENST00000462030 MT-ND2P03891 347 aa18.07■□□□□ 0.48
HPS3-204ENST00000462030 RETP07949 1114 aa18.07■□□□□ 0.48
HPS3-204ENST00000462030 CLCA4Q14CN2 919 aa18.07■□□□□ 0.48
HPS3-204ENST00000462030 BCL2A1Q16548 175 aa18.07■□□□□ 0.48
HPS3-204ENST00000462030 SMN1Q16637 294 aaKnown RBP18.07■□□□□ 0.48
HPS3-204ENST00000462030 CES5AQ6NT32 575 aa18.07■□□□□ 0.48
HPS3-204ENST00000462030 SUSD1Q6UWL2 747 aa18.07■□□□□ 0.48
HPS3-204ENST00000462030 LINC00299Q6ZSB3 139 aa18.07■□□□□ 0.48
HPS3-204ENST00000462030 HIPK1Q86Z02 1210 aa18.07■□□□□ 0.48
HPS3-204ENST00000462030 SCAIQ8N9R8 606 aa18.07■□□□□ 0.48
HPS3-204ENST00000462030 BCL7BQ9BQE9 202 aa18.07■□□□□ 0.48
HPS3-204ENST00000462030 MTPAPQ9NVV4 582 aaKnown RBP eCLIP18.07■□□□□ 0.48
HPS3-204ENST00000462030 ELOVL2Q9NXB9 296 aa18.07■□□□□ 0.48
HPS3-204ENST00000462030 PADI3Q9ULW8 664 aa18.07■□□□□ 0.48
HPS3-204ENST00000462030 VPS9D1Q9Y2B5 631 aa18.07■□□□□ 0.48
HPS3-204ENST00000462030 RBMX2Q9Y388 322 aaKnown RBP18.07■□□□□ 0.48
HPS3-204ENST00000462030 TSC22D4Q9Y3Q8 395 aa18.07■□□□□ 0.48
HPS3-204ENST00000462030 PKP3Q9Y446 797 aa18.07■□□□□ 0.48
HPS3-204ENST00000462030 TTC34A8MYJ7 566 aa18.07■□□□□ 0.48
HPS3-204ENST00000462030 AREL1O15033 823 aa18.07■□□□□ 0.48
HPS3-204ENST00000462030 OTCP00480 354 aa18.07■□□□□ 0.48
HPS3-204ENST00000462030 TACR2P21452 398 aa18.07■□□□□ 0.48
HPS3-204ENST00000462030 GDF5P43026 501 aa18.07■□□□□ 0.48
HPS3-204ENST00000462030 CLK3P49761 638 aaKnown RBP18.07■□□□□ 0.48
HPS3-204ENST00000462030 CCDC92Q53HC0 331 aaPredicted RBP18.07■□□□□ 0.48
HPS3-204ENST00000462030 CARD16Q5EG05 197 aa18.07■□□□□ 0.48
HPS3-204ENST00000462030 SGO1Q5FBB7 561 aa18.07■□□□□ 0.48
HPS3-204ENST00000462030 LRRC8DQ7L1W4 858 aa18.07■□□□□ 0.48
HPS3-204ENST00000462030 TAS2R42Q7RTR8 314 aa18.07■□□□□ 0.48
HPS3-204ENST00000462030 LGI2Q8N0V4 545 aa18.07■□□□□ 0.48
HPS3-204ENST00000462030 SPON2Q9BUD6 331 aa18.07■□□□□ 0.48
HPS3-204ENST00000462030 DUSP21Q9H596 190 aa18.07■□□□□ 0.48
HPS3-204ENST00000462030 MAGIXQ9H6Y5 334 aa18.07■□□□□ 0.48
HPS3-204ENST00000462030 ZNF408Q9H9D4 720 aa18.07■□□□□ 0.48
HPS3-204ENST00000462030 SPC25Q9HBM1 224 aa18.07■□□□□ 0.48
HPS3-204ENST00000462030 ITGB1BP2Q9UKP3 347 aa18.07■□□□□ 0.48
HPS3-204ENST00000462030 SLC45A1Q9Y2W3 748 aa18.07■□□□□ 0.48
HPS3-204ENST00000462030 TRBV5-3A0A0A0MS03 114 aa18.06■□□□□ 0.48
HPS3-204ENST00000462030 INSIG1O15503 277 aa18.06■□□□□ 0.48
HPS3-204ENST00000462030 FFAR2O15552 330 aa18.06■□□□□ 0.48
HPS3-204ENST00000462030 B3GALT4O96024 378 aa18.06■□□□□ 0.48
HPS3-204ENST00000462030 SERPINB10P48595 397 aa18.06■□□□□ 0.48
HPS3-204ENST00000462030 GBX1Q14549 363 aa18.06■□□□□ 0.48
HPS3-204ENST00000462030 FAM110CQ1W6H9 321 aa18.06■□□□□ 0.48
HPS3-204ENST00000462030 RFX4Q33E94 735 aa18.06■□□□□ 0.48
HPS3-204ENST00000462030 ZC3H12BQ5HYM0 836 aaKnown RBP18.06■□□□□ 0.48
HPS3-204ENST00000462030 CPZQ66K79 652 aa18.06■□□□□ 0.48
HPS3-204ENST00000462030 CEP68Q76N32 757 aa18.06■□□□□ 0.48
HPS3-204ENST00000462030 PHF10Q8WUB8 498 aaKnown RBP18.06■□□□□ 0.48
HPS3-204ENST00000462030 FBXO32Q969P5 355 aa18.06■□□□□ 0.48
HPS3-204ENST00000462030 PSKH2Q96QS6 385 aa18.06■□□□□ 0.48
HPS3-204ENST00000462030 OR52E6Q96RD3 313 aa18.06■□□□□ 0.48
HPS3-204ENST00000462030 PCDHB8Q9UN66 801 aa18.06■□□□□ 0.48
HPS3-204ENST00000462030 TMED5Q9Y3A6 229 aa18.06■□□□□ 0.48
HPS3-204ENST00000462030 TNPO3Q9Y5L0 923 aaKnown RBP18.06■□□□□ 0.48
HPS3-204ENST00000462030 PLXNA4Q9HCM2 1894 aa18.06■□□□□ 0.48
HPS3-204ENST00000462030 TAPBPO15533 448 aa18.06■□□□□ 0.48
HPS3-204ENST00000462030 ZNF623O75123 536 aa18.06■□□□□ 0.48
HPS3-204ENST00000462030 PARNO95453 639 aaKnown RBP18.06■□□□□ 0.48
HPS3-204ENST00000462030 GSNP06396 782 aa18.06■□□□□ 0.48
HPS3-204ENST00000462030 PABPC1P11940 636 aaKnown RBP18.06■□□□□ 0.48
HPS3-204ENST00000462030 MYCLP1P12525 358 aaPredicted RBP18.06■□□□□ 0.48
HPS3-204ENST00000462030 CD9P21926 228 aa18.06■□□□□ 0.48
HPS3-204ENST00000462030 KCNJ8Q15842 424 aa18.06■□□□□ 0.48
HPS3-204ENST00000462030 SYT6Q5T7P8 510 aaPredicted RBP18.06■□□□□ 0.48
HPS3-204ENST00000462030 CLMPQ9H6B4 373 aa18.06■□□□□ 0.48
HPS3-204ENST00000462030 PNMA8BQ9ULN7 279 aaPredicted RBP18.06■□□□□ 0.48
HPS3-204ENST00000462030 FAM220BPB1ANY3 271 aa18.05■□□□□ 0.48
HPS3-204ENST00000462030 RGS14O43566 566 aa18.05■□□□□ 0.48
HPS3-204ENST00000462030 MYO1DO94832 1006 aa18.05■□□□□ 0.48
HPS3-204ENST00000462030 OXSR1O95747 527 aaPredicted RBP18.05■□□□□ 0.48
HPS3-204ENST00000462030 IGLV3-27P01718 113 aa18.05■□□□□ 0.48
HPS3-204ENST00000462030 JUNDP17535 347 aa18.05■□□□□ 0.48
HPS3-204ENST00000462030 ITGB6P18564 788 aa18.05■□□□□ 0.48
HPS3-204ENST00000462030 PSMA3P25788 255 aa18.05■□□□□ 0.48
HPS3-204ENST00000462030 CD40LGP29965 261 aa18.05■□□□□ 0.48
HPS3-204ENST00000462030 GZMMP51124 257 aa18.05■□□□□ 0.48
HPS3-204ENST00000462030 KCNQ1P51787 676 aa18.05■□□□□ 0.48
HPS3-204ENST00000462030 CLCN4P51793 760 aa18.05■□□□□ 0.48
HPS3-204ENST00000462030 PHC1P78364 1004 aa18.05■□□□□ 0.48
HPS3-204ENST00000462030 SHQ1Q6PI26 577 aaKnown RBP18.05■□□□□ 0.48
HPS3-204ENST00000462030 PLPP6Q8IY26 295 aa18.05■□□□□ 0.48
HPS3-204ENST00000462030 ATAD1Q8NBU5 361 aa18.05■□□□□ 0.48
HPS3-204ENST00000462030 FAM120BQ96EK7 910 aaKnown RBP18.05■□□□□ 0.48
HPS3-204ENST00000462030 PYURFQ96I23 114 aa18.05■□□□□ 0.48
HPS3-204ENST00000462030 C8orf48Q96LL4 319 aa18.05■□□□□ 0.48
HPS3-204ENST00000462030 SH3GL1Q99961 368 aa18.05■□□□□ 0.48
HPS3-204ENST00000462030 MYOCQ99972 504 aa18.05■□□□□ 0.48
HPS3-204ENST00000462030 ASPSCR1Q9BZE9 553 aa18.05■□□□□ 0.48
HPS3-204ENST00000462030 SLIRPQ9GZT3 109 aaKnown RBP18.05■□□□□ 0.48
HPS3-204ENST00000462030 C1orf109Q9NX04 203 aa18.05■□□□□ 0.48
HPS3-204ENST00000462030 RNF181Q9P0P0 153 aa18.05■□□□□ 0.48
HPS3-204ENST00000462030 UBA2Q9UBT2 640 aaPredicted RBP18.05■□□□□ 0.48
HPS3-204ENST00000462030 ABCG2Q9UNQ0 655 aa18.05■□□□□ 0.48
HPS3-204ENST00000462030 STX7O15400 261 aaKnown RBP18.05■□□□□ 0.48
HPS3-204ENST00000462030 SEC24AO95486 1093 aa18.05■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms