RNA–Protein interactions for RNA: ENST00000460767.5

SCAMP4-206, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 4

Gene SCAMP4, Length 569 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-206ENST00000460767 VCLP18206 1134 aa13.28□□□□□ -0.28
SCAMP4-206ENST00000460767 RPL10P27635 214 aaKnown RBP13.28□□□□□ -0.28
SCAMP4-206ENST00000460767 AKT1P31749 480 aa13.28□□□□□ -0.28
SCAMP4-206ENST00000460767 DRG2P55039 364 aaKnown RBP13.28□□□□□ -0.28
SCAMP4-206ENST00000460767 FOXM1Q08050 763 aa13.28□□□□□ -0.28
SCAMP4-206ENST00000460767 RPE65Q16518 533 aa13.28□□□□□ -0.28
SCAMP4-206ENST00000460767 ZRANB3Q5FWF4 1079 aa13.28□□□□□ -0.28
SCAMP4-206ENST00000460767 C1QL3Q5VWW1 255 aa13.28□□□□□ -0.28
SCAMP4-206ENST00000460767 LYPLAL1Q5VWZ2 237 aa13.28□□□□□ -0.28
SCAMP4-206ENST00000460767 TMEM26Q6ZUK4 368 aa13.28□□□□□ -0.28
SCAMP4-206ENST00000460767 DET1Q7L5Y6 550 aa13.28□□□□□ -0.28
SCAMP4-206ENST00000460767 SYVN1Q86TM6 617 aa13.28□□□□□ -0.28
SCAMP4-206ENST00000460767 RBM12BQ8IXT5 1001 aaKnown RBP13.28□□□□□ -0.28
SCAMP4-206ENST00000460767 Q8NA96 180 aa13.28□□□□□ -0.28
SCAMP4-206ENST00000460767 SPATA4Q8NEY3 305 aa13.28□□□□□ -0.28
SCAMP4-206ENST00000460767 GPR150Q8NGU9 434 aa13.28□□□□□ -0.28
SCAMP4-206ENST00000460767 TCTN2Q96GX1 697 aa13.28□□□□□ -0.28
SCAMP4-206ENST00000460767 RUNDC3BQ96NL0 473 aa13.28□□□□□ -0.28
SCAMP4-206ENST00000460767 TRIM56Q9BRZ2 755 aaKnown RBP13.28□□□□□ -0.28
SCAMP4-206ENST00000460767 P2RY12Q9H244 342 aa13.28□□□□□ -0.28
SCAMP4-206ENST00000460767 LHX9Q9NQ69 397 aa13.28□□□□□ -0.28
SCAMP4-206ENST00000460767 ERRFI1Q9UJM3 462 aaPredicted RBP13.28□□□□□ -0.28
SCAMP4-206ENST00000460767 PADI1Q9ULC6 663 aa13.28□□□□□ -0.28
SCAMP4-206ENST00000460767 ZNF451Q9Y4E5 1061 aa13.28□□□□□ -0.28
SCAMP4-206ENST00000460767 SLC5A10A0PJK1 596 aa13.27□□□□□ -0.29
SCAMP4-206ENST00000460767 MAGEB16A2A368 324 aa13.27□□□□□ -0.29
SCAMP4-206ENST00000460767 PIPSLA2A3N6 862 aa13.27□□□□□ -0.29
SCAMP4-206ENST00000460767 SDR42E2A6NKP2 422 aa13.27□□□□□ -0.29
SCAMP4-206ENST00000460767 OR1I1O60431 355 aa13.27□□□□□ -0.29
SCAMP4-206ENST00000460767 SNX2O60749 519 aa13.27□□□□□ -0.29
SCAMP4-206ENST00000460767 DPM1O60762 260 aa13.27□□□□□ -0.29
SCAMP4-206ENST00000460767 KATNA1O75449 491 aa13.27□□□□□ -0.29
SCAMP4-206ENST00000460767 CCNYL3P0C7X3 344 aa13.27□□□□□ -0.29
SCAMP4-206ENST00000460767 ADARP55265 1226 aaKnown RBP13.27□□□□□ -0.29
SCAMP4-206ENST00000460767 GFERP55789 205 aa13.27□□□□□ -0.29
SCAMP4-206ENST00000460767 SARNPP82979 210 aaKnown RBP13.27□□□□□ -0.29
SCAMP4-206ENST00000460767 RPA4Q13156 261 aa13.27□□□□□ -0.29
SCAMP4-206ENST00000460767 MRPL49Q13405 166 aaKnown RBP13.27□□□□□ -0.29
SCAMP4-206ENST00000460767 DHX34Q14147 1143 aaKnown RBP13.27□□□□□ -0.29
SCAMP4-206ENST00000460767 SYT10Q6XYQ8 523 aa13.27□□□□□ -0.29
SCAMP4-206ENST00000460767 SPDYE1Q8NFV5 336 aaPredicted RBP13.27□□□□□ -0.29
SCAMP4-206ENST00000460767 CT55Q8WUE5 264 aa13.27□□□□□ -0.29
SCAMP4-206ENST00000460767 ZFPM2Q8WW38 1151 aa13.27□□□□□ -0.29
SCAMP4-206ENST00000460767 DCUN1D1Q96GG9 259 aa13.27□□□□□ -0.29
SCAMP4-206ENST00000460767 RMDN2Q96LZ7 410 aa13.27□□□□□ -0.29
SCAMP4-206ENST00000460767 OR6C1Q96RD1 312 aa13.27□□□□□ -0.29
SCAMP4-206ENST00000460767 INSM2Q96T92 566 aaPredicted RBP13.27□□□□□ -0.29
SCAMP4-206ENST00000460767 WDR83Q9BRX9 315 aaKnown RBP13.27□□□□□ -0.29
SCAMP4-206ENST00000460767 CCM2Q9BSQ5 444 aa13.27□□□□□ -0.29
SCAMP4-206ENST00000460767 OSGEPL1Q9H4B0 414 aa13.27□□□□□ -0.29
SCAMP4-206ENST00000460767 ACTL8Q9H568 366 aa13.27□□□□□ -0.29
SCAMP4-206ENST00000460767 COG4Q9H9E3 785 aa13.27□□□□□ -0.29
SCAMP4-206ENST00000460767 SEMA5BQ9P283 1151 aa13.27□□□□□ -0.29
SCAMP4-206ENST00000460767 KLHL3Q9UH77 587 aa13.27□□□□□ -0.29
SCAMP4-206ENST00000460767 CDYLQ9Y232 598 aa13.27□□□□□ -0.29
SCAMP4-206ENST00000460767 TRBV23OR9-2A0A075B6M9 112 aa13.26□□□□□ -0.29
SCAMP4-206ENST00000460767 QSOX1O00391 747 aa13.26□□□□□ -0.29
SCAMP4-206ENST00000460767 CD3EAPO15446 510 aaKnown RBP13.26□□□□□ -0.29
SCAMP4-206ENST00000460767 TTI1O43156 1089 aa13.26□□□□□ -0.29
SCAMP4-206ENST00000460767 SPAG6O75602 509 aa13.26□□□□□ -0.29
SCAMP4-206ENST00000460767 USP1O94782 785 aa13.26□□□□□ -0.29
SCAMP4-206ENST00000460767 SEC31AO94979 1220 aaKnown RBP13.26□□□□□ -0.29
SCAMP4-206ENST00000460767 MTHFD1P11586 935 aaKnown RBP13.26□□□□□ -0.29
SCAMP4-206ENST00000460767 RPS3P23396 243 aaKnown RBP eCLIP13.26□□□□□ -0.292e-7■□□□□ 10.7
SCAMP4-206ENST00000460767 COL8A1P27658 744 aa13.26□□□□□ -0.29
SCAMP4-206ENST00000460767 ACADLP28330 430 aa13.26□□□□□ -0.29
SCAMP4-206ENST00000460767 LEPRP48357 1165 aaKnown RBP13.26□□□□□ -0.29
SCAMP4-206ENST00000460767 CD151P48509 253 aa13.26□□□□□ -0.29
SCAMP4-206ENST00000460767 PPM1FP49593 454 aaPredicted RBP13.26□□□□□ -0.29
SCAMP4-206ENST00000460767 DR1Q01658 176 aa13.26□□□□□ -0.29
SCAMP4-206ENST00000460767 MORF4L2Q15014 288 aa13.26□□□□□ -0.29
SCAMP4-206ENST00000460767 PPP1R7Q15435 360 aa13.26□□□□□ -0.29
SCAMP4-206ENST00000460767 EIF2S3LQ2VIR3 472 aaKnown RBP13.26□□□□□ -0.29
SCAMP4-206ENST00000460767 ANKRD20A4Q4UJ75 823 aa13.26□□□□□ -0.29
SCAMP4-206ENST00000460767 MSS51Q4VC12 460 aa13.26□□□□□ -0.29
SCAMP4-206ENST00000460767 HIBCHQ6NVY1 386 aaPredicted RBP13.26□□□□□ -0.29
SCAMP4-206ENST00000460767 JMJD6Q6NYC1 403 aaPredicted RBP13.26□□□□□ -0.29
SCAMP4-206ENST00000460767 PPP1R3BQ86XI6 285 aa13.26□□□□□ -0.29
SCAMP4-206ENST00000460767 RASGRP3Q8IV61 690 aa13.26□□□□□ -0.29
SCAMP4-206ENST00000460767 KLHL6Q8WZ60 621 aa13.26□□□□□ -0.29
SCAMP4-206ENST00000460767 PNPLA2Q96AD5 504 aa13.26□□□□□ -0.29
SCAMP4-206ENST00000460767 BIRC8Q96P09 236 aa13.26□□□□□ -0.29
SCAMP4-206ENST00000460767 TBC1D10AQ9BXI6 508 aa13.26□□□□□ -0.29
SCAMP4-206ENST00000460767 RAB33BQ9H082 229 aa13.26□□□□□ -0.29
SCAMP4-206ENST00000460767 CATSPERZQ9NTU4 200 aa13.26□□□□□ -0.29
SCAMP4-206ENST00000460767 EPHA6Q9UF33 1036 aa13.26□□□□□ -0.29
SCAMP4-206ENST00000460767 SLC5A6Q9Y289 635 aa13.26□□□□□ -0.29
SCAMP4-206ENST00000460767 PDZK1P1A8MUH7 402 aa13.25□□□□□ -0.29
SCAMP4-206ENST00000460767 E7ESA3 106 aa13.25□□□□□ -0.29
SCAMP4-206ENST00000460767 SMAPO00193 183 aa13.25□□□□□ -0.29
SCAMP4-206ENST00000460767 GPC4O75487 556 aa13.25□□□□□ -0.29
SCAMP4-206ENST00000460767 KRT38O76015 456 aa13.25□□□□□ -0.29
SCAMP4-206ENST00000460767 PTPN4P29074 926 aa13.25□□□□□ -0.29
SCAMP4-206ENST00000460767 PDHA2P29803 388 aa13.25□□□□□ -0.29
SCAMP4-206ENST00000460767 TTPAP49638 278 aa13.25□□□□□ -0.29
SCAMP4-206ENST00000460767 SH3BP2P78314 561 aa13.25□□□□□ -0.29
SCAMP4-206ENST00000460767 PRAMEP78395 509 aa13.25□□□□□ -0.29
SCAMP4-206ENST00000460767 GPR18Q14330 331 aa13.25□□□□□ -0.29
SCAMP4-206ENST00000460767 GBX1Q14549 363 aa13.25□□□□□ -0.29
SCAMP4-206ENST00000460767 SEPT7Q16181 437 aaKnown RBP13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms