RNA–Protein interactions for RNA: ENST00000460485.1

ERCC3-205, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 3

Gene ERCC3, Length 815 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-205ENST00000460485 ARNTLO00327 626 aa13.8□□□□□ -0.2
ERCC3-205ENST00000460485 OR7A17O14581 309 aa13.8□□□□□ -0.2
ERCC3-205ENST00000460485 ACOT8O14734 319 aa13.8□□□□□ -0.2
ERCC3-205ENST00000460485 NPC1O15118 1278 aa13.8□□□□□ -0.2
ERCC3-205ENST00000460485 TAPBPO15533 448 aa13.8□□□□□ -0.2
ERCC3-205ENST00000460485 GPR39O43194 453 aa13.8□□□□□ -0.2
ERCC3-205ENST00000460485 SYNCRIPO60506 623 aaKnown RBP13.8□□□□□ -0.2
ERCC3-205ENST00000460485 ATG13O75143 517 aa13.8□□□□□ -0.2
ERCC3-205ENST00000460485 TULP3O75386 442 aa13.8□□□□□ -0.2
ERCC3-205ENST00000460485 CLDN9O95484 217 aa13.8□□□□□ -0.2
ERCC3-205ENST00000460485 CAPN1P07384 714 aa13.8□□□□□ -0.2
ERCC3-205ENST00000460485 TIMP2P16035 220 aa13.8□□□□□ -0.2
ERCC3-205ENST00000460485 XRCC1P18887 633 aaPredicted RBP13.8□□□□□ -0.2
ERCC3-205ENST00000460485 ARL1P40616 181 aaPredicted RBP13.8□□□□□ -0.2
ERCC3-205ENST00000460485 RPIAP49247 311 aa13.8□□□□□ -0.2
ERCC3-205ENST00000460485 PRLHRP49683 370 aa13.8□□□□□ -0.2
ERCC3-205ENST00000460485 B4GALNT1Q00973 533 aa13.8□□□□□ -0.2
ERCC3-205ENST00000460485 RALGDSQ12967 914 aa13.8□□□□□ -0.2
ERCC3-205ENST00000460485 GRB7Q14451 532 aa13.8□□□□□ -0.2
ERCC3-205ENST00000460485 PTPRRQ15256 657 aa13.8□□□□□ -0.2
ERCC3-205ENST00000460485 HNRNPA1L2Q32P51 320 aaKnown RBP13.8□□□□□ -0.2
ERCC3-205ENST00000460485 AASDHQ4L235 1098 aaPredicted RBP13.8□□□□□ -0.2
ERCC3-205ENST00000460485 ARSIQ5FYB1 569 aa13.8□□□□□ -0.2
ERCC3-205ENST00000460485 TMEM215Q68D42 235 aa13.8□□□□□ -0.2
ERCC3-205ENST00000460485 LETMD1Q6P1Q0 360 aa13.8□□□□□ -0.2
ERCC3-205ENST00000460485 SYCE2Q6PIF2 218 aa13.8□□□□□ -0.2
ERCC3-205ENST00000460485 IL27RAQ6UWB1 636 aa13.8□□□□□ -0.2
ERCC3-205ENST00000460485 UBE2R2Q712K3 238 aaPredicted RBP13.8□□□□□ -0.2
ERCC3-205ENST00000460485 TRIM46Q7Z4K8 759 aa13.8□□□□□ -0.2
ERCC3-205ENST00000460485 TECPR1Q7Z6L1 1165 aa13.8□□□□□ -0.2
ERCC3-205ENST00000460485 RASGRP3Q8IV61 690 aa13.8□□□□□ -0.2
ERCC3-205ENST00000460485 AQP12AQ8IXF9 295 aa13.8□□□□□ -0.2
ERCC3-205ENST00000460485 FBXO15Q8NCQ5 510 aaPredicted RBP13.8□□□□□ -0.2
ERCC3-205ENST00000460485 BTN2A2Q8WVV5 523 aa13.8□□□□□ -0.2
ERCC3-205ENST00000460485 PYDC1Q8WXC3 89 aa13.8□□□□□ -0.2
ERCC3-205ENST00000460485 ASB11Q8WXH4 323 aa13.8□□□□□ -0.2
ERCC3-205ENST00000460485 GLYATL1Q969I3 302 aa13.8□□□□□ -0.2
ERCC3-205ENST00000460485 ASB16Q96NS5 453 aa13.8□□□□□ -0.2
ERCC3-205ENST00000460485 TMEM79Q9BSE2 394 aa13.8□□□□□ -0.2
ERCC3-205ENST00000460485 ARL15Q9NXU5 204 aa13.8□□□□□ -0.2
ERCC3-205ENST00000460485 SNX6Q9UNH7 406 aa13.8□□□□□ -0.2
ERCC3-205ENST00000460485 MAPRE3Q9UPY8 281 aa13.8□□□□□ -0.2
ERCC3-205ENST00000460485 BTRCQ9Y297 605 aa13.8□□□□□ -0.2
ERCC3-205ENST00000460485 NCOR2Q9Y618 2525 aa13.79□□□□□ -0.2
ERCC3-205ENST00000460485 CCDC154A6NI56 674 aa13.79□□□□□ -0.2
ERCC3-205ENST00000460485 C1QTNF3-AMACRE9PGA6 284 aa13.79□□□□□ -0.2
ERCC3-205ENST00000460485 H3BNX3 289 aa13.79□□□□□ -0.2
ERCC3-205ENST00000460485 PPP6CO00743 305 aa13.79□□□□□ -0.2
ERCC3-205ENST00000460485 WNT9AO14904 365 aa13.79□□□□□ -0.2
ERCC3-205ENST00000460485 LSM1O15116 133 aaKnown RBP13.79□□□□□ -0.2
ERCC3-205ENST00000460485 ULK1O75385 1050 aa13.79□□□□□ -0.2
ERCC3-205ENST00000460485 SLCO2B1O94956 709 aa13.79□□□□□ -0.2
ERCC3-205ENST00000460485 FSHRP23945 695 aa13.79□□□□□ -0.2
ERCC3-205ENST00000460485 CCR7P32248 378 aa13.79□□□□□ -0.2
ERCC3-205ENST00000460485 SLC6A12P48065 614 aa13.79□□□□□ -0.2
ERCC3-205ENST00000460485 HSPA7P48741 367 aa13.79□□□□□ -0.2
ERCC3-205ENST00000460485 POLR2JP52435 117 aaKnown RBP13.79□□□□□ -0.2
ERCC3-205ENST00000460485 HNRNPFP52597 415 aaKnown RBP13.79□□□□□ -0.2
ERCC3-205ENST00000460485 CLNS1AP54105 237 aaKnown RBP13.79□□□□□ -0.2
ERCC3-205ENST00000460485 EEFSECP57772 596 aaKnown RBP13.79□□□□□ -0.2
ERCC3-205ENST00000460485 NTHL1P78549 312 aa13.79□□□□□ -0.2
ERCC3-205ENST00000460485 RHDQ02161 417 aa13.79□□□□□ -0.2
ERCC3-205ENST00000460485 CREB5Q02930 508 aa13.79□□□□□ -0.2
ERCC3-205ENST00000460485 PCDH1Q08174 1060 aa13.79□□□□□ -0.2
ERCC3-205ENST00000460485 BLMHQ13867 455 aa13.79□□□□□ -0.2
ERCC3-205ENST00000460485 BOP1Q14137 746 aaKnown RBP13.79□□□□□ -0.2
ERCC3-205ENST00000460485 NR6A1Q15406 480 aa13.79□□□□□ -0.2
ERCC3-205ENST00000460485 PHKG1Q16816 387 aa13.79□□□□□ -0.2
ERCC3-205ENST00000460485 BCL7AQ4VC05 210 aa13.79□□□□□ -0.2
ERCC3-205ENST00000460485 OGFRL1Q5TC84 451 aaPredicted RBP13.79□□□□□ -0.2
ERCC3-205ENST00000460485 CACHD1Q5VU97 1274 aa13.79□□□□□ -0.2
ERCC3-205ENST00000460485 IZUMO2Q6UXV1 221 aa13.79□□□□□ -0.2
ERCC3-205ENST00000460485 MSANTD1Q6ZTZ1 278 aa13.79□□□□□ -0.2
ERCC3-205ENST00000460485 ZFAND4Q86XD8 727 aa13.79□□□□□ -0.2
ERCC3-205ENST00000460485 NPAS3Q8IXF0 933 aa13.79□□□□□ -0.2
ERCC3-205ENST00000460485 BHLHE22Q8NFJ8 381 aaPredicted RBP13.79□□□□□ -0.2
ERCC3-205ENST00000460485 OR52B6Q8NGF0 335 aa13.79□□□□□ -0.2
ERCC3-205ENST00000460485 N4BP2L2Q92802 583 aaPredicted RBP13.79□□□□□ -0.2
ERCC3-205ENST00000460485 USP7Q93009 1102 aa13.79□□□□□ -0.2
ERCC3-205ENST00000460485 FBXL8Q96CD0 374 aa13.79□□□□□ -0.2
ERCC3-205ENST00000460485 ZSWIM3Q96MP5 696 aa13.79□□□□□ -0.2
ERCC3-205ENST00000460485 FOPNLQ96NB1 174 aa13.79□□□□□ -0.2
ERCC3-205ENST00000460485 FBRSL1Q9HCM7 1045 aaKnown RBP13.79□□□□□ -0.2
ERCC3-205ENST00000460485 ADAMTS6Q9UKP5 1117 aa13.79□□□□□ -0.2
ERCC3-205ENST00000460485 TIMM22Q9Y584 194 aa13.79□□□□□ -0.2
ERCC3-205ENST00000460485 PRSS51A0A1B0GVH4 220 aa13.78□□□□□ -0.2
ERCC3-205ENST00000460485 TCRBV3S1A0A5B6 114 aa13.78□□□□□ -0.2
ERCC3-205ENST00000460485 KLHL33A6NCF5 533 aa13.78□□□□□ -0.2
ERCC3-205ENST00000460485 E7ENX8 843 aa13.78□□□□□ -0.2
ERCC3-205ENST00000460485 RSL1D1O76021 490 aaKnown RBP13.78□□□□□ -0.2
ERCC3-205ENST00000460485 CATP04040 527 aaKnown RBP13.78□□□□□ -0.2
ERCC3-205ENST00000460485 RPSAP08865 295 aaKnown RBP13.78□□□□□ -0.2
ERCC3-205ENST00000460485 PRPS2P11908 318 aa13.78□□□□□ -0.2
ERCC3-205ENST00000460485 ITGB6P18564 788 aa13.78□□□□□ -0.2
ERCC3-205ENST00000460485 CAPN3P20807 821 aa13.78□□□□□ -0.2
ERCC3-205ENST00000460485 DPP6P42658 865 aa13.78□□□□□ -0.2
ERCC3-205ENST00000460485 DPTQ07507 201 aa13.78□□□□□ -0.2
ERCC3-205ENST00000460485 INPP5AQ14642 412 aa13.78□□□□□ -0.2
ERCC3-205ENST00000460485 TRIP10Q15642 601 aa13.78□□□□□ -0.2
ERCC3-205ENST00000460485 SYTL3Q4VX76 610 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms