RNA–Protein interactions for RNA: ENST00000460168.1

HERC4-207, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 2

Gene HERC4, Length 2,215 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-207ENST00000460168 PPP1R16AQ96I34 528 aa10.19□□□□□ -0.78
HERC4-207ENST00000460168 GPR78Q96P69 363 aa10.19□□□□□ -0.78
HERC4-207ENST00000460168 ACOX2Q99424 681 aa10.19□□□□□ -0.78
HERC4-207ENST00000460168 GPR21Q99679 349 aa10.19□□□□□ -0.78
HERC4-207ENST00000460168 PIP5K1AQ99755 562 aa10.19□□□□□ -0.78
HERC4-207ENST00000460168 USB1Q9BQ65 265 aaKnown RBP10.19□□□□□ -0.78
HERC4-207ENST00000460168 MARCH7Q9H992 704 aa10.19□□□□□ -0.78
HERC4-207ENST00000460168 PLGRKTQ9HBL7 147 aa10.19□□□□□ -0.78
HERC4-207ENST00000460168 POPDC3Q9HBV1 291 aa10.19□□□□□ -0.78
HERC4-207ENST00000460168 NPHS2Q9NP85 383 aa10.19□□□□□ -0.78
HERC4-207ENST00000460168 DYRK4Q9NR20 520 aa10.19□□□□□ -0.78
HERC4-207ENST00000460168 THAP10Q9P2Z0 257 aaPredicted RBP10.19□□□□□ -0.78
HERC4-207ENST00000460168 CD84Q9UIB8 345 aa10.19□□□□□ -0.78
HERC4-207ENST00000460168 MTF2Q9Y483 593 aaPredicted RBP10.19□□□□□ -0.78
HERC4-207ENST00000460168 SNX8Q9Y5X2 465 aa10.19□□□□□ -0.78
HERC4-207ENST00000460168 TICRRQ7Z2Z1 1910 aa10.19□□□□□ -0.78
HERC4-207ENST00000460168 A0A1W2PPC1 479 aa10.18□□□□□ -0.78
HERC4-207ENST00000460168 ANTXRLA6NF34 631 aa10.18□□□□□ -0.78
HERC4-207ENST00000460168 TRIM13O60858 407 aa10.18□□□□□ -0.78
HERC4-207ENST00000460168 PEX11AO75192 247 aa10.18□□□□□ -0.78
HERC4-207ENST00000460168 NIPSNAP2O75323 286 aa10.18□□□□□ -0.78
HERC4-207ENST00000460168 HMGN1P05114 100 aa10.18□□□□□ -0.78
HERC4-207ENST00000460168 RBP1P09455 135 aa10.18□□□□□ -0.78
HERC4-207ENST00000460168 ELFN1P0C7U0 828 aa10.18□□□□□ -0.78
HERC4-207ENST00000460168 GRK2P25098 689 aa10.18□□□□□ -0.78
HERC4-207ENST00000460168 ACRV1P26436 265 aa10.18□□□□□ -0.78
HERC4-207ENST00000460168 RCVRNP35243 200 aa10.18□□□□□ -0.78
HERC4-207ENST00000460168 VHLP40337 213 aa10.18□□□□□ -0.78
HERC4-207ENST00000460168 HSPA13P48723 471 aa10.18□□□□□ -0.78
HERC4-207ENST00000460168 SUOXP51687 545 aa10.18□□□□□ -0.78
HERC4-207ENST00000460168 PTPN5P54829 565 aa10.18□□□□□ -0.78
HERC4-207ENST00000460168 TIAL1Q01085 375 aaKnown RBP eCLIP10.18□□□□□ -0.78
HERC4-207ENST00000460168 CDC20Q12834 499 aa10.18□□□□□ -0.78
HERC4-207ENST00000460168 ACAP2Q15057 778 aa10.18□□□□□ -0.78
HERC4-207ENST00000460168 AAK1Q2M2I8 961 aa10.18□□□□□ -0.78
HERC4-207ENST00000460168 CTSL3PQ5NE16 218 aa10.18□□□□□ -0.78
HERC4-207ENST00000460168 LYPLAL1Q5VWZ2 237 aa10.18□□□□□ -0.78
HERC4-207ENST00000460168 FBXL19Q6PCT2 694 aa10.18□□□□□ -0.78
HERC4-207ENST00000460168 TMEM207Q6UWW9 146 aa10.18□□□□□ -0.78
HERC4-207ENST00000460168 ZYG11AQ6WRX3 759 aa10.18□□□□□ -0.78
HERC4-207ENST00000460168 RFLNAQ6ZTI6 216 aa10.18□□□□□ -0.78
HERC4-207ENST00000460168 DSG4Q86SJ6 1040 aa10.18□□□□□ -0.78
HERC4-207ENST00000460168 CDH26Q8IXH8 852 aa10.18□□□□□ -0.78
HERC4-207ENST00000460168 ST13P4Q8IZP2 240 aaPredicted RBP10.18□□□□□ -0.78
HERC4-207ENST00000460168 TMEM151AQ8N4L1 468 aa10.18□□□□□ -0.78
HERC4-207ENST00000460168 GALNT11Q8NCW6 608 aa10.18□□□□□ -0.78
HERC4-207ENST00000460168 TMIEQ8NEW7 156 aa10.18□□□□□ -0.78
HERC4-207ENST00000460168 KCNJ9Q92806 393 aa10.18□□□□□ -0.78
HERC4-207ENST00000460168 SGF29Q96ES7 293 aa10.18□□□□□ -0.78
HERC4-207ENST00000460168 C7orf26Q96N11 449 aa10.18□□□□□ -0.78
HERC4-207ENST00000460168 TRIM55Q9BYV6 548 aa10.18□□□□□ -0.78
HERC4-207ENST00000460168 SYTL2Q9HCH5 934 aa10.18□□□□□ -0.78
HERC4-207ENST00000460168 FBRSL1Q9HCM7 1045 aaKnown RBP10.18□□□□□ -0.78
HERC4-207ENST00000460168 SARS2Q9NP81 518 aaKnown RBP10.18□□□□□ -0.78
HERC4-207ENST00000460168 OXSMQ9NWU1 459 aa10.18□□□□□ -0.78
HERC4-207ENST00000460168 ZNF69Q9UC07 566 aa10.18□□□□□ -0.78
HERC4-207ENST00000460168 TRMT6Q9UJA5 497 aaKnown RBP10.18□□□□□ -0.78
HERC4-207ENST00000460168 ARL2BPQ9Y2Y0 163 aa10.18□□□□□ -0.78
HERC4-207ENST00000460168 PCDHB1Q9Y5F3 818 aa10.18□□□□□ -0.78
HERC4-207ENST00000460168 CACNG2Q9Y698 323 aa10.18□□□□□ -0.78
HERC4-207ENST00000460168 ANHXE9PGG2 379 aa10.18□□□□□ -0.78
HERC4-207ENST00000460168 POLR1CO15160 346 aaPredicted RBP10.18□□□□□ -0.78
HERC4-207ENST00000460168 ZBTB14O43829 449 aa10.18□□□□□ -0.78
HERC4-207ENST00000460168 ALX3O95076 343 aa10.18□□□□□ -0.78
HERC4-207ENST00000460168 KRT16P08779 473 aa10.18□□□□□ -0.78
HERC4-207ENST00000460168 PIM1P11309 404 aaPredicted RBP10.18□□□□□ -0.78
HERC4-207ENST00000460168 TFEBP19484 476 aa10.18□□□□□ -0.78
HERC4-207ENST00000460168 CDH3P22223 829 aa10.18□□□□□ -0.78
HERC4-207ENST00000460168 KCNA5P22460 613 aa10.18□□□□□ -0.78
HERC4-207ENST00000460168 ITGB7P26010 798 aa10.18□□□□□ -0.78
HERC4-207ENST00000460168 MMP12P39900 470 aa10.18□□□□□ -0.78
HERC4-207ENST00000460168 SLC1A6P48664 564 aa10.18□□□□□ -0.78
HERC4-207ENST00000460168 ETV1P50549 477 aa10.18□□□□□ -0.78
HERC4-207ENST00000460168 METAP1P53582 386 aa10.18□□□□□ -0.78
HERC4-207ENST00000460168 SRP54P61011 504 aaKnown RBP10.18□□□□□ -0.78
HERC4-207ENST00000460168 CSTF3Q12996 717 aaKnown RBP10.18□□□□□ -0.78
HERC4-207ENST00000460168 ATP13A5Q4VNC0 1218 aa10.18□□□□□ -0.78
HERC4-207ENST00000460168 TECRLQ5HYJ1 363 aa10.18□□□□□ -0.78
HERC4-207ENST00000460168 LIPMQ5VYY2 423 aa10.18□□□□□ -0.78
HERC4-207ENST00000460168 CES4AQ5XG92 561 aa10.18□□□□□ -0.78
HERC4-207ENST00000460168 PTRHD1Q6GMV3 140 aaKnown RBP10.18□□□□□ -0.78
HERC4-207ENST00000460168 CFAP161Q6P656 301 aa10.18□□□□□ -0.78
HERC4-207ENST00000460168 PAQR3Q6TCH7 311 aa10.18□□□□□ -0.78
HERC4-207ENST00000460168 ADAMTSL2Q86TH1 951 aa10.18□□□□□ -0.78
HERC4-207ENST00000460168 CRLF3Q8IUI8 442 aa10.18□□□□□ -0.78
HERC4-207ENST00000460168 NXPE1Q8N323 547 aa10.18□□□□□ -0.78
HERC4-207ENST00000460168 PPP4R1Q8TF05 950 aa10.18□□□□□ -0.78
HERC4-207ENST00000460168 P2RY13Q9BPV8 354 aa10.18□□□□□ -0.78
HERC4-207ENST00000460168 BOCQ9BWV1 1114 aa10.18□□□□□ -0.78
HERC4-207ENST00000460168 BTBD2Q9BX70 525 aa10.18□□□□□ -0.78
HERC4-207ENST00000460168 ALG9Q9H6U8 611 aa10.18□□□□□ -0.78
HERC4-207ENST00000460168 ZNF395Q9H8N7 513 aaPredicted RBP10.18□□□□□ -0.78
HERC4-207ENST00000460168 NMRK1Q9NWW6 199 aa10.18□□□□□ -0.78
HERC4-207ENST00000460168 ATP6V1HQ9UI12 483 aa10.18□□□□□ -0.78
HERC4-207ENST00000460168 DCTN4Q9UJW0 460 aa10.18□□□□□ -0.78
HERC4-207ENST00000460168 PPM1HQ9ULR3 514 aa10.18□□□□□ -0.78
HERC4-207ENST00000460168 MAPRE3Q9UPY8 281 aa10.18□□□□□ -0.78
HERC4-207ENST00000460168 COLQQ9Y215 455 aaPredicted RBP10.18□□□□□ -0.78
HERC4-207ENST00000460168 APOBEC2Q9Y235 224 aaKnown RBP10.18□□□□□ -0.78
HERC4-207ENST00000460168 MED16Q9Y2X0 877 aa10.18□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms