RNA–Protein interactions for RNA: ENST00000459584.1

SNORD42A-201, Transcript of small nucleolar RNA, C/D box 42A, humanhuman

BASIC

Gene SNORD42A, Length 64 nt, Biotype snoRNA, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD42A-201ENST00000459584 PCNX3Q9H6A9 2034 aa3.2□□□□□ -1.9
SNORD42A-201ENST00000459584 LOC102723996A0A087X1L8 192 aa3.2□□□□□ -1.9
SNORD42A-201ENST00000459584 IGKV3D-20A0A0C4DH25 116 aa3.2□□□□□ -1.9
SNORD42A-201ENST00000459584 A8MV72 311 aaPredicted RBP3.2□□□□□ -1.9
SNORD42A-201ENST00000459584 TCERG1O14776 1098 aaKnown RBP3.2□□□□□ -1.9
SNORD42A-201ENST00000459584 SH3BP5O60239 455 aa3.2□□□□□ -1.9
SNORD42A-201ENST00000459584 OR10H2O60403 315 aa3.2□□□□□ -1.9
SNORD42A-201ENST00000459584 ENTPD3O75355 529 aa3.2□□□□□ -1.9
SNORD42A-201ENST00000459584 ZFAND5O76080 213 aa3.2□□□□□ -1.9
SNORD42A-201ENST00000459584 PDX1P52945 283 aa3.2□□□□□ -1.9
SNORD42A-201ENST00000459584 NAP1L1P55209 391 aaKnown RBP3.2□□□□□ -1.9
SNORD42A-201ENST00000459584 CDH13P55290 713 aa3.2□□□□□ -1.9
SNORD42A-201ENST00000459584 GRAPQ13588 217 aa3.2□□□□□ -1.9
SNORD42A-201ENST00000459584 PCLAFQ15004 111 aa3.2□□□□□ -1.9
SNORD42A-201ENST00000459584 RILPL1Q5EBL4 403 aa3.2□□□□□ -1.9
SNORD42A-201ENST00000459584 KRT79Q5XKE5 535 aa3.2□□□□□ -1.9
SNORD42A-201ENST00000459584 TMEM211Q6ICI0 200 aa3.2□□□□□ -1.9
SNORD42A-201ENST00000459584 TAGAPQ8N103 731 aa3.2□□□□□ -1.9
SNORD42A-201ENST00000459584 AFAP1Q8N556 730 aa3.2□□□□□ -1.9
SNORD42A-201ENST00000459584 PPFIBP2Q8ND30 876 aa3.2□□□□□ -1.9
SNORD42A-201ENST00000459584 PAPD5Q8NDF8 572 aaKnown RBP3.2□□□□□ -1.9
SNORD42A-201ENST00000459584 MOSPD2Q8NHP6 518 aa3.2□□□□□ -1.9
SNORD42A-201ENST00000459584 SUSD6Q92537 303 aa3.2□□□□□ -1.9
SNORD42A-201ENST00000459584 MAGED4Q96JG8 741 aa3.2□□□□□ -1.9
SNORD42A-201ENST00000459584 FNBP1Q96RU3 617 aa3.2□□□□□ -1.9
SNORD42A-201ENST00000459584 BTBD10Q9BSF8 475 aa3.2□□□□□ -1.9
SNORD42A-201ENST00000459584 NUP85Q9BW27 656 aa3.2□□□□□ -1.9
SNORD42A-201ENST00000459584 B3GAT1Q9P2W7 334 aa3.2□□□□□ -1.9
SNORD42A-201ENST00000459584 CACNG4Q9UBN1 327 aa3.2□□□□□ -1.9
SNORD42A-201ENST00000459584 ZDHHC2Q9UIJ5 367 aa3.2□□□□□ -1.9
SNORD42A-201ENST00000459584 RNF215Q9Y6U7 377 aa3.2□□□□□ -1.9
SNORD42A-201ENST00000459584 ZNF541Q9H0D2 1346 aa3.19□□□□□ -1.9
SNORD42A-201ENST00000459584 ZNF644Q9H582 1327 aaPredicted RBP3.19□□□□□ -1.9
SNORD42A-201ENST00000459584 A0A1W2PN81 502 aa3.19□□□□□ -1.9
SNORD42A-201ENST00000459584 FEZF1A0PJY2 475 aa3.19□□□□□ -1.9
SNORD42A-201ENST00000459584 NDUFAF8A1L188 74 aa3.19□□□□□ -1.9
SNORD42A-201ENST00000459584 H7C423 109 aa3.19□□□□□ -1.9
SNORD42A-201ENST00000459584 TSPAN9O75954 239 aa3.19□□□□□ -1.9
SNORD42A-201ENST00000459584 MOCS3O95396 460 aa3.19□□□□□ -1.9
SNORD42A-201ENST00000459584 WDPCPO95876 746 aa3.19□□□□□ -1.9
SNORD42A-201ENST00000459584 GPIP06744 558 aa3.19□□□□□ -1.9
SNORD42A-201ENST00000459584 PORP16435 677 aaPredicted RBP3.19□□□□□ -1.9
SNORD42A-201ENST00000459584 DPEP1P16444 411 aa3.19□□□□□ -1.9
SNORD42A-201ENST00000459584 ALOX12P18054 663 aa3.19□□□□□ -1.9
SNORD42A-201ENST00000459584 SAT1P21673 171 aa3.19□□□□□ -1.9
SNORD42A-201ENST00000459584 CHRNA7P36544 502 aa3.19□□□□□ -1.9
SNORD42A-201ENST00000459584 MAGEA11P43364 429 aa3.19□□□□□ -1.9
SNORD42A-201ENST00000459584 PRKCZQ05513 592 aa3.19□□□□□ -1.9
SNORD42A-201ENST00000459584 SQLEQ14534 574 aa3.19□□□□□ -1.9
SNORD42A-201ENST00000459584 NR1D2Q14995 579 aa3.19□□□□□ -1.9
SNORD42A-201ENST00000459584 TAF13Q15543 124 aa3.19□□□□□ -1.9
SNORD42A-201ENST00000459584 MEA1Q16626 185 aa3.19□□□□□ -1.9
SNORD42A-201ENST00000459584 ITPRIPL2Q3MIP1 535 aa3.19□□□□□ -1.9
SNORD42A-201ENST00000459584 XKR3Q5GH77 459 aa3.19□□□□□ -1.9
SNORD42A-201ENST00000459584 RNASEH2BQ5TBB1 312 aaKnown RBP3.19□□□□□ -1.9
SNORD42A-201ENST00000459584 STXBP4Q6ZWJ1 553 aa3.19□□□□□ -1.9
SNORD42A-201ENST00000459584 TMEM173Q86WV6 379 aaPredicted RBP3.19□□□□□ -1.9
SNORD42A-201ENST00000459584 RPAP2Q8IXW5 612 aaPredicted RBP3.19□□□□□ -1.9
SNORD42A-201ENST00000459584 CDK20Q8IZL9 346 aa3.19□□□□□ -1.9
SNORD42A-201ENST00000459584 EID3Q8N140 333 aa3.19□□□□□ -1.9
SNORD42A-201ENST00000459584 MCUQ8NE86 351 aa3.19□□□□□ -1.9
SNORD42A-201ENST00000459584 DBF4BQ8NFT6 615 aa3.19□□□□□ -1.9
SNORD42A-201ENST00000459584 OR11H4Q8NGC9 324 aa3.19□□□□□ -1.9
SNORD42A-201ENST00000459584 LPGAT1Q92604 370 aa3.19□□□□□ -1.9
SNORD42A-201ENST00000459584 SLC22A18Q96BI1 424 aa3.19□□□□□ -1.9
SNORD42A-201ENST00000459584 ANKRD9Q96BM1 317 aaPredicted RBP3.19□□□□□ -1.9
SNORD42A-201ENST00000459584 NSUN4Q96CB9 384 aaKnown RBP3.19□□□□□ -1.9
SNORD42A-201ENST00000459584 C18orf12Q96KH6 178 aa3.19□□□□□ -1.9
SNORD42A-201ENST00000459584 ATOH8Q96SQ7 321 aa3.19□□□□□ -1.9
SNORD42A-201ENST00000459584 IWS1Q96ST2 819 aa3.19□□□□□ -1.9
SNORD42A-201ENST00000459584 VGLL1Q99990 258 aa3.19□□□□□ -1.9
SNORD42A-201ENST00000459584 SYT11Q9BT88 431 aa3.19□□□□□ -1.9
SNORD42A-201ENST00000459584 CDK19Q9BWU1 502 aa3.19□□□□□ -1.9
SNORD42A-201ENST00000459584 MMP27Q9H306 513 aa3.19□□□□□ -1.9
SNORD42A-201ENST00000459584 ATP13A3Q9H7F0 1226 aa3.19□□□□□ -1.9
SNORD42A-201ENST00000459584 ZNF701Q9NV72 531 aaPredicted RBP3.19□□□□□ -1.9
SNORD42A-201ENST00000459584 RNF186Q9NXI6 227 aa3.19□□□□□ -1.9
SNORD42A-201ENST00000459584 PSD3Q9NYI0 1048 aa3.19□□□□□ -1.9
SNORD42A-201ENST00000459584 DAPK2Q9UIK4 370 aa3.19□□□□□ -1.9
SNORD42A-201ENST00000459584 PRSS21Q9Y6M0 314 aa3.19□□□□□ -1.9
SNORD42A-201ENST00000459584 GPR75-ASB3A0A0A6YYF3 556 aa3.18□□□□□ -1.9
SNORD42A-201ENST00000459584 A0A0J9YWU9 116 aa3.18□□□□□ -1.9
SNORD42A-201ENST00000459584 ANKRD18BA2A2Z9 1011 aa3.18□□□□□ -1.9
SNORD42A-201ENST00000459584 ANKRD61A6NGH8 418 aa3.18□□□□□ -1.9
SNORD42A-201ENST00000459584 ZNF195O14628 629 aa3.18□□□□□ -1.9
SNORD42A-201ENST00000459584 MEIS2O14770 477 aa3.18□□□□□ -1.9
SNORD42A-201ENST00000459584 TSPAN1O60635 241 aa3.18□□□□□ -1.9
SNORD42A-201ENST00000459584 GFPT2O94808 682 aa3.18□□□□□ -1.9
SNORD42A-201ENST00000459584 DUS4LO95620 317 aaKnown RBP3.18□□□□□ -1.9
SNORD42A-201ENST00000459584 OR2T7P0C7T2 308 aa3.18□□□□□ -1.9
SNORD42A-201ENST00000459584 SMIM18P0DKX4 95 aa3.18□□□□□ -1.9
SNORD42A-201ENST00000459584 PTPN3P26045 913 aa3.18□□□□□ -1.9
SNORD42A-201ENST00000459584 SLC6A6P31641 620 aa3.18□□□□□ -1.9
SNORD42A-201ENST00000459584 ACTN2P35609 894 aa3.18□□□□□ -1.9
SNORD42A-201ENST00000459584 MATR3P43243 847 aaKnown RBP eCLIP3.18□□□□□ -1.9
SNORD42A-201ENST00000459584 STAT2P52630 851 aa3.18□□□□□ -1.9
SNORD42A-201ENST00000459584 CUL4AQ13619 759 aa3.18□□□□□ -1.9
SNORD42A-201ENST00000459584 TEAD2Q15562 447 aa3.18□□□□□ -1.9
SNORD42A-201ENST00000459584 LPAL2Q16609 132 aa3.18□□□□□ -1.9
SNORD42A-201ENST00000459584 UGP2Q16851 508 aa3.18□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms