RNA–Protein interactions for RNA: ENST00000458530.1

VPS50-207, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 4

Gene VPS50, Length 667 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-207ENST00000458530 AASDHQ4L235 1098 aaPredicted RBP8.75□□□□□ -1.01
VPS50-207ENST00000458530 LACTB2Q53H82 288 aaPredicted RBP8.75□□□□□ -1.01
VPS50-207ENST00000458530 UNC50Q53HI1 259 aa8.75□□□□□ -1.01
VPS50-207ENST00000458530 SH2D4BQ5SQS7 431 aa8.75□□□□□ -1.01
VPS50-207ENST00000458530 METTL21CQ5VZV1 264 aa8.75□□□□□ -1.01
VPS50-207ENST00000458530 CES4AQ5XG92 561 aa8.75□□□□□ -1.01
VPS50-207ENST00000458530 FOXR1Q6PIV2 292 aa8.75□□□□□ -1.01
VPS50-207ENST00000458530 TMEM220Q6QAJ8 160 aa8.75□□□□□ -1.01
VPS50-207ENST00000458530 SBSNQ6UWP8 590 aa8.75□□□□□ -1.01
VPS50-207ENST00000458530 Q6ZS52 159 aa8.75□□□□□ -1.01
VPS50-207ENST00000458530 UBE2R2Q712K3 238 aaPredicted RBP8.75□□□□□ -1.01
VPS50-207ENST00000458530 ADGRG6Q86SQ4 1221 aa8.75□□□□□ -1.01
VPS50-207ENST00000458530 CUZD1Q86UP6 607 aa8.75□□□□□ -1.01
VPS50-207ENST00000458530 LRRTM4Q86VH4 590 aa8.75□□□□□ -1.01
VPS50-207ENST00000458530 TRIM69Q86WT6 500 aa8.75□□□□□ -1.01
VPS50-207ENST00000458530 HEATR4Q86WZ0 1026 aa8.75□□□□□ -1.01
VPS50-207ENST00000458530 ZNF781Q8N8C0 355 aa8.75□□□□□ -1.01
VPS50-207ENST00000458530 OR2T34Q8NGX1 318 aa8.75□□□□□ -1.01
VPS50-207ENST00000458530 MAGEC3Q8TD91 643 aa8.75□□□□□ -1.01
VPS50-207ENST00000458530 ATL1Q8WXF7 558 aa8.75□□□□□ -1.01
VPS50-207ENST00000458530 CCT6BQ92526 530 aa8.75□□□□□ -1.01
VPS50-207ENST00000458530 COL26A1Q96A83 441 aa8.75□□□□□ -1.01
VPS50-207ENST00000458530 ERP27Q96DN0 273 aa8.75□□□□□ -1.01
VPS50-207ENST00000458530 COX14Q96I36 57 aa8.75□□□□□ -1.01
VPS50-207ENST00000458530 MAGEB10Q96LZ2 347 aaPredicted RBP8.75□□□□□ -1.01
VPS50-207ENST00000458530 RMDN2Q96LZ7 410 aa8.75□□□□□ -1.01
VPS50-207ENST00000458530 CCT7Q99832 543 aa8.75□□□□□ -1.01
VPS50-207ENST00000458530 CCDC28BQ9BUN5 200 aa8.75□□□□□ -1.01
VPS50-207ENST00000458530 C1QTNF2Q9BXJ5 285 aa8.75□□□□□ -1.01
VPS50-207ENST00000458530 SLC12A9Q9BXP2 914 aa8.75□□□□□ -1.01
VPS50-207ENST00000458530 NUSAP1Q9BXS6 441 aaKnown RBP8.75□□□□□ -1.01
VPS50-207ENST00000458530 C20orf27Q9GZN8 174 aa8.75□□□□□ -1.01
VPS50-207ENST00000458530 MKRN2Q9H000 416 aaKnown RBP8.75□□□□□ -1.01
VPS50-207ENST00000458530 BTBD1Q9H0C5 482 aa8.75□□□□□ -1.01
VPS50-207ENST00000458530 OR2AG1Q9H205 316 aa8.75□□□□□ -1.01
VPS50-207ENST00000458530 ARRDC1-AS1Q9H2J1 176 aa8.75□□□□□ -1.01
VPS50-207ENST00000458530 GSTO2Q9H4Y5 243 aa8.75□□□□□ -1.01
VPS50-207ENST00000458530 COG4Q9H9E3 785 aa8.75□□□□□ -1.01
VPS50-207ENST00000458530 PARVBQ9HBI1 364 aa8.75□□□□□ -1.01
VPS50-207ENST00000458530 SAR1AQ9NR31 198 aa8.75□□□□□ -1.01
VPS50-207ENST00000458530 PNPOQ9NVS9 261 aa8.75□□□□□ -1.01
VPS50-207ENST00000458530 HEY2Q9UBP5 337 aa8.75□□□□□ -1.01
VPS50-207ENST00000458530 CDYLQ9Y232 598 aa8.75□□□□□ -1.01
VPS50-207ENST00000458530 ANGPTL3Q9Y5C1 460 aa8.75□□□□□ -1.01
VPS50-207ENST00000458530 LAMA5O15230 3695 aa8.75□□□□□ -1.01
VPS50-207ENST00000458530 PLXND1Q9Y4D7 1925 aa8.75□□□□□ -1.01
VPS50-207ENST00000458530 MAST4O15021 2626 aa8.75□□□□□ -1.01
VPS50-207ENST00000458530 TBC1D3DA0A087WVF3 549 aa8.74□□□□□ -1.01
VPS50-207ENST00000458530 TBC1D3IA0A087WXS9 549 aa8.74□□□□□ -1.01
VPS50-207ENST00000458530 TBC1D3EA0A087X179 549 aa8.74□□□□□ -1.01
VPS50-207ENST00000458530 TBC1D3KA0A087X1G2 549 aa8.74□□□□□ -1.01
VPS50-207ENST00000458530 A0A1W2PQU0 124 aa8.74□□□□□ -1.01
VPS50-207ENST00000458530 TBC1D3FA6NER0 549 aaPredicted RBP8.74□□□□□ -1.01
VPS50-207ENST00000458530 NCF1BA6NI72 391 aaPredicted RBP8.74□□□□□ -1.01
VPS50-207ENST00000458530 NCF1CA8MVU1 366 aaPredicted RBP8.74□□□□□ -1.01
VPS50-207ENST00000458530 TBC1D3LB9A6J9 549 aa8.74□□□□□ -1.01
VPS50-207ENST00000458530 H3BM21 787 aa8.74□□□□□ -1.01
VPS50-207ENST00000458530 TAF4O00268 1085 aa8.74□□□□□ -1.01
VPS50-207ENST00000458530 CACNB4O00305 520 aaPredicted RBP8.74□□□□□ -1.01
VPS50-207ENST00000458530 TOR1BO14657 336 aa8.74□□□□□ -1.01
VPS50-207ENST00000458530 HGSO14964 777 aaPredicted RBP8.74□□□□□ -1.01
VPS50-207ENST00000458530 KMOO15229 486 aa8.74□□□□□ -1.01
VPS50-207ENST00000458530 KCNJ13O60928 360 aa8.74□□□□□ -1.01
VPS50-207ENST00000458530 VPS4BO75351 444 aa8.74□□□□□ -1.01
VPS50-207ENST00000458530 KATNA1O75449 491 aa8.74□□□□□ -1.01
VPS50-207ENST00000458530 OTCP00480 354 aa8.74□□□□□ -1.01
VPS50-207ENST00000458530 CAPNS1P04632 268 aa8.74□□□□□ -1.01
VPS50-207ENST00000458530 CHRNGP07510 517 aa8.74□□□□□ -1.01
VPS50-207ENST00000458530 SERPINA6P08185 405 aa8.74□□□□□ -1.01
VPS50-207ENST00000458530 TBC1D3HP0C7X1 549 aa8.74□□□□□ -1.01
VPS50-207ENST00000458530 MYCLP1P12525 358 aaPredicted RBP8.74□□□□□ -1.01
VPS50-207ENST00000458530 NCF1P14598 390 aaPredicted RBP8.74□□□□□ -1.01
VPS50-207ENST00000458530 KELP23276 732 aa8.74□□□□□ -1.01
VPS50-207ENST00000458530 PBLDP30039 288 aaPredicted RBP8.74□□□□□ -1.01
VPS50-207ENST00000458530 OXTRP30559 389 aa8.74□□□□□ -1.01
VPS50-207ENST00000458530 HNRNPH2P55795 449 aaKnown RBP8.74□□□□□ -1.01
VPS50-207ENST00000458530 IRF4Q15306 451 aa8.74□□□□□ -1.01
VPS50-207ENST00000458530 ZRSR2Q15696 482 aaKnown RBP8.74□□□□□ -1.01
VPS50-207ENST00000458530 PPP1R3AQ16821 1122 aa8.74□□□□□ -1.01
VPS50-207ENST00000458530 WSCD2Q2TBF2 565 aa8.74□□□□□ -1.01
VPS50-207ENST00000458530 TMEM259Q4ZIN3 620 aa8.74□□□□□ -1.01
VPS50-207ENST00000458530 FAM91A1Q658Y4 838 aa8.74□□□□□ -1.01
VPS50-207ENST00000458530 TBC1D3GQ6DHY5 549 aa8.74□□□□□ -1.01
VPS50-207ENST00000458530 TBC1D3CQ6IPX1 549 aa8.74□□□□□ -1.01
VPS50-207ENST00000458530 SYT13Q7L8C5 426 aa8.74□□□□□ -1.01
VPS50-207ENST00000458530 LRRC70Q7Z2Q7 622 aa8.74□□□□□ -1.01
VPS50-207ENST00000458530 SLC22A15Q8IZD6 547 aa8.74□□□□□ -1.01
VPS50-207ENST00000458530 TBC1D3Q8IZP1 549 aaPredicted RBP8.74□□□□□ -1.01
VPS50-207ENST00000458530 CLYBLQ8N0X4 340 aa8.74□□□□□ -1.01
VPS50-207ENST00000458530 ZNF483Q8TF39 744 aaPredicted RBP8.74□□□□□ -1.01
VPS50-207ENST00000458530 GAB3Q8WWW8 586 aa8.74□□□□□ -1.01
VPS50-207ENST00000458530 ASB11Q8WXH4 323 aa8.74□□□□□ -1.01
VPS50-207ENST00000458530 SKA1Q96BD8 255 aa8.74□□□□□ -1.01
VPS50-207ENST00000458530 ERLEC1Q96DZ1 483 aa8.74□□□□□ -1.01
VPS50-207ENST00000458530 CCDC97Q96F63 343 aaPredicted RBP8.74□□□□□ -1.01
VPS50-207ENST00000458530 MRGPRX1Q96LB2 322 aa8.74□□□□□ -1.01
VPS50-207ENST00000458530 LENG8Q96PV6 779 aaPredicted RBP8.74□□□□□ -1.01
VPS50-207ENST00000458530 ZNF382Q96SR6 550 aa8.74□□□□□ -1.01
VPS50-207ENST00000458530 TEX101Q9BY14 249 aa8.74□□□□□ -1.01
VPS50-207ENST00000458530 SLC17A9Q9BYT1 436 aa8.74□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms