RNA–Protein interactions for RNA: ENST00000455883.2

CSMD3-204, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 1 (best) BASIC

Gene CSMD3, Length 12,485 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-204ENST00000455883 SLCO5A1Q9H2Y9 848 aa5.13□□□□□ -1.59
CSMD3-204ENST00000455883 LRRN3Q9H3W5 708 aa5.13□□□□□ -1.59
CSMD3-204ENST00000455883 LYARQ9NX58 379 aaKnown RBP5.13□□□□□ -1.59
CSMD3-204ENST00000455883 FOCADQ5VW36 1801 aa5.13□□□□□ -1.59
CSMD3-204ENST00000455883 FABP12A6NFH5 140 aa5.13□□□□□ -1.59
CSMD3-204ENST00000455883 C1QTNF3-AMACRE9PGA6 284 aa5.13□□□□□ -1.59
CSMD3-204ENST00000455883 TLL1O43897 1013 aa5.13□□□□□ -1.59
CSMD3-204ENST00000455883 LY86O95711 162 aa5.13□□□□□ -1.59
CSMD3-204ENST00000455883 CD79BP40259 229 aa5.13□□□□□ -1.59
CSMD3-204ENST00000455883 MTHFRP42898 656 aa5.13□□□□□ -1.59
CSMD3-204ENST00000455883 LIMK2P53671 638 aa5.13□□□□□ -1.59
CSMD3-204ENST00000455883 GPX6P59796 221 aa5.13□□□□□ -1.59
CSMD3-204ENST00000455883 HERVK_113P63132 956 aa5.13□□□□□ -1.59
CSMD3-204ENST00000455883 USF2Q15853 346 aaPredicted RBP5.13□□□□□ -1.59
CSMD3-204ENST00000455883 CTC1Q2NKJ3 1217 aa5.13□□□□□ -1.59
CSMD3-204ENST00000455883 KIAA1614Q5VZ46 1190 aa5.13□□□□□ -1.59
CSMD3-204ENST00000455883 LLGL2Q6P1M3 1020 aa5.13□□□□□ -1.59
CSMD3-204ENST00000455883 FEM1CQ96JP0 617 aa5.13□□□□□ -1.59
CSMD3-204ENST00000455883 ERVK-6Q9BXR3 956 aa5.13□□□□□ -1.59
CSMD3-204ENST00000455883 DNAJC18Q9H819 358 aa5.13□□□□□ -1.59
CSMD3-204ENST00000455883 XPNPEP1Q9NQW7 623 aa5.13□□□□□ -1.59
CSMD3-204ENST00000455883 NLGN3Q9NZ94 848 aa5.13□□□□□ -1.59
CSMD3-204ENST00000455883 NINJ2Q9NZG7 142 aa5.13□□□□□ -1.59
CSMD3-204ENST00000455883 PIM2Q9P1W9 311 aa5.13□□□□□ -1.59
CSMD3-204ENST00000455883 TNFRSF10DQ9UBN6 386 aa5.13□□□□□ -1.59
CSMD3-204ENST00000455883 GJA3Q9Y6H8 435 aa5.13□□□□□ -1.59
CSMD3-204ENST00000455883 HERVK_113P62684 666 aa5.13□□□□□ -1.59
CSMD3-204ENST00000455883 SH3PXD2AQ5TCZ1 1133 aa5.13□□□□□ -1.59
CSMD3-204ENST00000455883 ZNF571Q7Z3V5 609 aaPredicted RBP5.13□□□□□ -1.59
CSMD3-204ENST00000455883 SMAP2Q8WU79 429 aaPredicted RBP5.13□□□□□ -1.59
CSMD3-204ENST00000455883 KLHL6Q8WZ60 621 aa5.13□□□□□ -1.59
CSMD3-204ENST00000455883 PHYHIPQ92561 330 aa5.13□□□□□ -1.59
CSMD3-204ENST00000455883 S100PBPQ96BU1 408 aa5.13□□□□□ -1.59
CSMD3-204ENST00000455883 HSPA12BQ96MM6 686 aa5.13□□□□□ -1.59
CSMD3-204ENST00000455883 MALRD1Q5VYJ5 2156 aa5.13□□□□□ -1.59
CSMD3-204ENST00000455883 C17orf102A2RUQ5 167 aa5.13□□□□□ -1.59
CSMD3-204ENST00000455883 SOBPA7XYQ1 873 aa5.13□□□□□ -1.59
CSMD3-204ENST00000455883 CLDN4O14493 209 aa5.13□□□□□ -1.59
CSMD3-204ENST00000455883 CCNB2O95067 398 aa5.13□□□□□ -1.59
CSMD3-204ENST00000455883 TRBC1P01850 177 aa5.13□□□□□ -1.59
CSMD3-204ENST00000455883 PSEN2P49810 448 aa5.13□□□□□ -1.59
CSMD3-204ENST00000455883 CSHL1Q14406 222 aa5.13□□□□□ -1.59
CSMD3-204ENST00000455883 LDLRAP1Q5SW96 308 aa5.13□□□□□ -1.59
CSMD3-204ENST00000455883 FAM198BQ6UWH4 519 aa5.13□□□□□ -1.59
CSMD3-204ENST00000455883 RNF128Q8TEB7 428 aa5.13□□□□□ -1.59
CSMD3-204ENST00000455883 FATE1Q969F0 183 aa5.13□□□□□ -1.59
CSMD3-204ENST00000455883 ACSBG1Q96GR2 724 aa5.13□□□□□ -1.59
CSMD3-204ENST00000455883 RIPOR3Q96MK2 946 aa5.13□□□□□ -1.59
CSMD3-204ENST00000455883 SNX18Q96RF0 628 aa5.13□□□□□ -1.59
CSMD3-204ENST00000455883 MYOCQ99972 504 aa5.13□□□□□ -1.59
CSMD3-204ENST00000455883 PORCNQ9H237 461 aa5.13□□□□□ -1.59
CSMD3-204ENST00000455883 MS4A12Q9NXJ0 267 aa5.13□□□□□ -1.59
CSMD3-204ENST00000455883 BCL9LQ86UU0 1499 aa5.13□□□□□ -1.59
CSMD3-204ENST00000455883 PLD2O14939 933 aa5.13□□□□□ -1.59
CSMD3-204ENST00000455883 AKAP3O75969 853 aa5.13□□□□□ -1.59
CSMD3-204ENST00000455883 XRCC1P18887 633 aaPredicted RBP5.13□□□□□ -1.59
CSMD3-204ENST00000455883 GTF2A2P52657 109 aa5.13□□□□□ -1.59
CSMD3-204ENST00000455883 RHDQ02161 417 aa5.13□□□□□ -1.59
CSMD3-204ENST00000455883 ABHD18Q0P651 414 aa5.13□□□□□ -1.59
CSMD3-204ENST00000455883 SGCGQ13326 291 aa5.13□□□□□ -1.59
CSMD3-204ENST00000455883 GRB14Q14449 540 aa5.13□□□□□ -1.59
CSMD3-204ENST00000455883 PFKFB4Q16877 469 aa5.13□□□□□ -1.59
CSMD3-204ENST00000455883 PROX2Q3B8N5 592 aa5.13□□□□□ -1.59
CSMD3-204ENST00000455883 ABCA11PQ4W5N1 156 aa5.13□□□□□ -1.59
CSMD3-204ENST00000455883 FAM69AQ5T7M9 428 aa5.13□□□□□ -1.59
CSMD3-204ENST00000455883 PLEKHG7Q6ZR37 379 aa5.13□□□□□ -1.59
CSMD3-204ENST00000455883 SH3RF1Q7Z6J0 888 aa5.13□□□□□ -1.59
CSMD3-204ENST00000455883 JAZF1Q86VZ6 243 aa5.13□□□□□ -1.59
CSMD3-204ENST00000455883 C12orf40Q86WS4 652 aa5.13□□□□□ -1.59
CSMD3-204ENST00000455883 PSD4Q8NDX1 1056 aa5.13□□□□□ -1.59
CSMD3-204ENST00000455883 C12orf43Q96C57 262 aaKnown RBP5.13□□□□□ -1.59
CSMD3-204ENST00000455883 TPD52L3Q96J77 140 aa5.13□□□□□ -1.59
CSMD3-204ENST00000455883 C8orf37Q96NL8 207 aa5.13□□□□□ -1.59
CSMD3-204ENST00000455883 SLC4A5Q9BY07 1137 aa5.13□□□□□ -1.59
CSMD3-204ENST00000455883 PPA2Q9H2U2 334 aa5.13□□□□□ -1.59
CSMD3-204ENST00000455883 IL1RL2Q9HB29 575 aa5.13□□□□□ -1.59
CSMD3-204ENST00000455883 ABI3Q9P2A4 366 aa5.13□□□□□ -1.59
CSMD3-204ENST00000455883 CNTN6Q9UQ52 1028 aa5.13□□□□□ -1.59
CSMD3-204ENST00000455883 TNFSF13BQ9Y275 285 aa5.13□□□□□ -1.59
CSMD3-204ENST00000455883 TRIM64CA6NLI5 447 aa5.13□□□□□ -1.59
CSMD3-204ENST00000455883 B4GALT4O60513 344 aa5.13□□□□□ -1.59
CSMD3-204ENST00000455883 UCHL1P09936 223 aa5.13□□□□□ -1.59
CSMD3-204ENST00000455883 NR2F1P10589 423 aa5.13□□□□□ -1.59
CSMD3-204ENST00000455883 RPP30P78346 268 aaKnown RBP5.13□□□□□ -1.59
CSMD3-204ENST00000455883 MPPE1Q53F39 396 aa5.13□□□□□ -1.59
CSMD3-204ENST00000455883 POC1BQ8TC44 478 aa5.13□□□□□ -1.59
CSMD3-204ENST00000455883 ATG4AQ8WYN0 398 aa5.13□□□□□ -1.59
CSMD3-204ENST00000455883 ARL11Q969Q4 196 aa5.13□□□□□ -1.59
CSMD3-204ENST00000455883 ZNF419Q96HQ0 510 aaPredicted RBP5.13□□□□□ -1.59
CSMD3-204ENST00000455883 C11orf49Q9H6J7 331 aa5.13□□□□□ -1.59
CSMD3-204ENST00000455883 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP5.13□□□□□ -1.59
CSMD3-204ENST00000455883 VWA7Q9Y334 891 aa5.13□□□□□ -1.59
CSMD3-204ENST00000455883 CCRL2O00421 344 aa5.13□□□□□ -1.59
CSMD3-204ENST00000455883 TOR1BO14657 336 aa5.13□□□□□ -1.59
CSMD3-204ENST00000455883 MSH4O15457 936 aa5.13□□□□□ -1.59
CSMD3-204ENST00000455883 TYMPP19971 482 aa5.13□□□□□ -1.59
CSMD3-204ENST00000455883 SHMT1P34896 483 aa5.13□□□□□ -1.59
CSMD3-204ENST00000455883 SLC16A2P36021 539 aa5.13□□□□□ -1.59
CSMD3-204ENST00000455883 PTPN9P43378 593 aa5.13□□□□□ -1.59
CSMD3-204ENST00000455883 NDST2P52849 883 aa5.13□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms