RNA–Protein interactions for RNA: ENST00000454583.6

RIF1-207, Transcript of replication timing regulatory factor 1, humanhuman

TSL 2

Gene RIF1, Length 3,552 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-207ENST00000454583 ENO2P09104 434 aaPredicted RBP4.83□□□□□ -1.64
RIF1-207ENST00000454583 PNLIPP16233 465 aa4.83□□□□□ -1.64
RIF1-207ENST00000454583 IGFBP4P22692 258 aa4.83□□□□□ -1.64
RIF1-207ENST00000454583 CD27P26842 260 aa4.83□□□□□ -1.64
RIF1-207ENST00000454583 CRABP2P29373 138 aa4.83□□□□□ -1.64
RIF1-207ENST00000454583 SERPINB3P29508 390 aa4.83□□□□□ -1.64
RIF1-207ENST00000454583 ADSLP30566 484 aaPredicted RBP4.83□□□□□ -1.64
RIF1-207ENST00000454583 PKLRP30613 574 aa4.83□□□□□ -1.64
RIF1-207ENST00000454583 SSR1P43307 286 aaKnown RBP4.83□□□□□ -1.64
RIF1-207ENST00000454583 CCR10P46092 362 aa4.83□□□□□ -1.64
RIF1-207ENST00000454583 EMP3P54852 163 aa4.83□□□□□ -1.64
RIF1-207ENST00000454583 INPP5AQ14642 412 aa4.83□□□□□ -1.64
RIF1-207ENST00000454583 SKIDA1Q1XH10 827 aa4.83□□□□□ -1.64
RIF1-207ENST00000454583 C18orf21Q32NC0 220 aaPredicted RBP4.83□□□□□ -1.64
RIF1-207ENST00000454583 PIGGQ5H8A4 983 aa4.83□□□□□ -1.64
RIF1-207ENST00000454583 TMEM31Q5JXX7 168 aa4.83□□□□□ -1.64
RIF1-207ENST00000454583 FAM151BQ6UXP7 276 aa4.83□□□□□ -1.64
RIF1-207ENST00000454583 HACD2Q6Y1H2 254 aa4.83□□□□□ -1.64
RIF1-207ENST00000454583 UBE3DQ7Z6J8 389 aa4.83□□□□□ -1.64
RIF1-207ENST00000454583 FUNDC1Q8IVP5 155 aa4.83□□□□□ -1.64
RIF1-207ENST00000454583 WDR75Q8IWA0 830 aaKnown RBP4.83□□□□□ -1.64
RIF1-207ENST00000454583 MFSD2AQ8NA29 543 aa4.83□□□□□ -1.64
RIF1-207ENST00000454583 ABHD11Q8NFV4 315 aa4.83□□□□□ -1.64
RIF1-207ENST00000454583 OR13H1Q8NG92 308 aa4.83□□□□□ -1.64
RIF1-207ENST00000454583 PIWIL2Q8TC59 973 aaKnown RBP4.83□□□□□ -1.64
RIF1-207ENST00000454583 CCDC28BQ9BUN5 200 aa4.83□□□□□ -1.64
RIF1-207ENST00000454583 GATA5Q9BWX5 397 aaPredicted RBP4.83□□□□□ -1.64
RIF1-207ENST00000454583 SPNS1Q9H2V7 528 aa4.83□□□□□ -1.64
RIF1-207ENST00000454583 RHBGQ9H310 441 aa4.83□□□□□ -1.64
RIF1-207ENST00000454583 SPATA6Q9NWH7 488 aaPredicted RBP4.83□□□□□ -1.64
RIF1-207ENST00000454583 CD84Q9UIB8 345 aa4.83□□□□□ -1.64
RIF1-207ENST00000454583 PCDHGB2Q9Y5G2 931 aa4.83□□□□□ -1.64
RIF1-207ENST00000454583 A0A1W2PQU0 124 aa4.82□□□□□ -1.64
RIF1-207ENST00000454583 KRT87PA6NCN2 255 aa4.82□□□□□ -1.64
RIF1-207ENST00000454583 A6NHS1 94 aa4.82□□□□□ -1.64
RIF1-207ENST00000454583 GOLGA8RI6L899 631 aa4.82□□□□□ -1.64
RIF1-207ENST00000454583 CDC7O00311 574 aa4.82□□□□□ -1.64
RIF1-207ENST00000454583 DCTN3O75935 186 aa4.82□□□□□ -1.64
RIF1-207ENST00000454583 KRT37O76014 449 aa4.82□□□□□ -1.64
RIF1-207ENST00000454583 TM7SF2O76062 418 aa4.82□□□□□ -1.64
RIF1-207ENST00000454583 CLPSP04118 112 aa4.82□□□□□ -1.64
RIF1-207ENST00000454583 PYGLP06737 847 aa4.82□□□□□ -1.64
RIF1-207ENST00000454583 IMPDH1P20839 514 aa4.82□□□□□ -1.64
RIF1-207ENST00000454583 CALB2P22676 271 aa4.82□□□□□ -1.64
RIF1-207ENST00000454583 CA4P22748 312 aa4.82□□□□□ -1.64
RIF1-207ENST00000454583 GRK2P25098 689 aa4.82□□□□□ -1.64
RIF1-207ENST00000454583 HOXD12P35452 270 aa4.82□□□□□ -1.64
RIF1-207ENST00000454583 SLC1A6P48664 564 aa4.82□□□□□ -1.64
RIF1-207ENST00000454583 MTTPP55157 894 aa4.82□□□□□ -1.64
RIF1-207ENST00000454583 FOXA1P55317 472 aa4.82□□□□□ -1.64
RIF1-207ENST00000454583 ACTR3P61158 418 aa4.82□□□□□ -1.64
RIF1-207ENST00000454583 SH3BP2P78314 561 aa4.82□□□□□ -1.64
RIF1-207ENST00000454583 TBL3Q12788 808 aaKnown RBP4.82□□□□□ -1.64
RIF1-207ENST00000454583 RCN2Q14257 317 aa4.82□□□□□ -1.64
RIF1-207ENST00000454583 E2F5Q15329 346 aa4.82□□□□□ -1.64
RIF1-207ENST00000454583 C6orf10Q5SRN2 563 aa4.82□□□□□ -1.64
RIF1-207ENST00000454583 LIPMQ5VYY2 423 aa4.82□□□□□ -1.64
RIF1-207ENST00000454583 C16orf46Q6P387 395 aa4.82□□□□□ -1.64
RIF1-207ENST00000454583 UNC5DQ6UXZ4 953 aa4.82□□□□□ -1.64
RIF1-207ENST00000454583 GLRX5Q86SX6 157 aa4.82□□□□□ -1.64
RIF1-207ENST00000454583 CHPFQ8IZ52 775 aa4.82□□□□□ -1.64
RIF1-207ENST00000454583 SFRP1Q8N474 314 aa4.82□□□□□ -1.64
RIF1-207ENST00000454583 CHCHD4Q8N4Q1 142 aa4.82□□□□□ -1.64
RIF1-207ENST00000454583 CSGALNACT1Q8TDX6 532 aa4.82□□□□□ -1.64
RIF1-207ENST00000454583 MRRFQ96E11 262 aaKnown RBP4.82□□□□□ -1.64
RIF1-207ENST00000454583 ZNF764Q96H86 408 aaPredicted RBP4.82□□□□□ -1.64
RIF1-207ENST00000454583 NDNQ99608 321 aa4.82□□□□□ -1.64
RIF1-207ENST00000454583 SPON2Q9BUD6 331 aa4.82□□□□□ -1.64
RIF1-207ENST00000454583 KCNH6Q9H252 994 aa4.82□□□□□ -1.64
RIF1-207ENST00000454583 FAM83DQ9H4H8 585 aa4.82□□□□□ -1.64
RIF1-207ENST00000454583 TM9SF3Q9HD45 589 aa4.82□□□□□ -1.64
RIF1-207ENST00000454583 C20orf96Q9NUD7 363 aaPredicted RBP4.82□□□□□ -1.64
RIF1-207ENST00000454583 NBPF19A0A087WUL8 3843 aa4.82□□□□□ -1.64
RIF1-207ENST00000454583 ZZEF1O43149 2961 aa4.82□□□□□ -1.64
RIF1-207ENST00000454583 CCDC88CQ9P219 2028 aa4.82□□□□□ -1.64
RIF1-207ENST00000454583 TYW5A2RUC4 315 aaKnown RBP4.82□□□□□ -1.64
RIF1-207ENST00000454583 SMIM23A6NLE4 172 aa4.82□□□□□ -1.64
RIF1-207ENST00000454583 DLGAP1O14490 977 aa4.82□□□□□ -1.64
RIF1-207ENST00000454583 FCHO1O14526 889 aa4.82□□□□□ -1.64
RIF1-207ENST00000454583 SCN2BO60939 215 aa4.82□□□□□ -1.64
RIF1-207ENST00000454583 ZNF217O75362 1048 aa4.82□□□□□ -1.64
RIF1-207ENST00000454583 KRT38O76015 456 aa4.82□□□□□ -1.64
RIF1-207ENST00000454583 MED26O95402 600 aa4.82□□□□□ -1.64
RIF1-207ENST00000454583 DCNP07585 359 aaKnown RBP4.82□□□□□ -1.64
RIF1-207ENST00000454583 HNRNPA2B1P22626 353 aaKnown RBP4.82□□□□□ -1.64
RIF1-207ENST00000454583 ABCG1P45844 678 aa4.82□□□□□ -1.64
RIF1-207ENST00000454583 GZMMP51124 257 aa4.82□□□□□ -1.64
RIF1-207ENST00000454583 IRX1P78414 480 aaPredicted RBP4.82□□□□□ -1.64
RIF1-207ENST00000454583 MROH9Q5TGP6 573 aa4.82□□□□□ -1.64
RIF1-207ENST00000454583 FCRL6Q6DN72 434 aa4.82□□□□□ -1.64
RIF1-207ENST00000454583 RAPH1Q70E73 1250 aa4.82□□□□□ -1.64
RIF1-207ENST00000454583 RNF44Q7L0R7 432 aa4.82□□□□□ -1.64
RIF1-207ENST00000454583 RBFAQ8N0V3 343 aa4.82□□□□□ -1.64
RIF1-207ENST00000454583 HDDC3Q8N4P3 179 aa4.82□□□□□ -1.64
RIF1-207ENST00000454583 CLDN19Q8N6F1 224 aa4.82□□□□□ -1.64
RIF1-207ENST00000454583 BEND7Q8N7W2 519 aaPredicted RBP4.82□□□□□ -1.64
RIF1-207ENST00000454583 PPM1NQ8N819 430 aa4.82□□□□□ -1.64
RIF1-207ENST00000454583 BMPERQ8N8U9 685 aa4.82□□□□□ -1.64
RIF1-207ENST00000454583 ARMC2Q8NEN0 867 aa4.82□□□□□ -1.64
RIF1-207ENST00000454583 CCL4L1Q8NHW4 92 aa4.82□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms