RNA–Protein interactions for RNA: ENST00000453858.1

SBDSP1-204, Transcript of SBDS, ribosome maturation factor pseudogene 1, humanhuman

BASIC

Gene SBDSP1, Length 737 nt, Biotype transcribed unprocessed pseudogene, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SBDSP1-204ENST00000453858 AMPD3Q01432 767 aa5.06□□□□□ -1.6
SBDSP1-204ENST00000453858 PMP22Q01453 160 aa5.06□□□□□ -1.6
SBDSP1-204ENST00000453858 TOB2Q14106 344 aaPredicted RBP5.06□□□□□ -1.6
SBDSP1-204ENST00000453858 TMEM119Q4V9L6 283 aa5.06□□□□□ -1.6
SBDSP1-204ENST00000453858 ATP13A4Q4VNC1 1196 aa5.06□□□□□ -1.6
SBDSP1-204ENST00000453858 CACHD1Q5VU97 1274 aa5.06□□□□□ -1.6
SBDSP1-204ENST00000453858 PNCKQ6P2M8 343 aa5.06□□□□□ -1.6
SBDSP1-204ENST00000453858 SCARA5Q6ZMJ2 495 aa5.06□□□□□ -1.6
SBDSP1-204ENST00000453858 LIX1LQ8IVB5 337 aa5.06□□□□□ -1.6
SBDSP1-204ENST00000453858 SYTL1Q8IYJ3 562 aa5.06□□□□□ -1.6
SBDSP1-204ENST00000453858 D2HGDHQ8N465 521 aa5.06□□□□□ -1.6
SBDSP1-204ENST00000453858 DTX3Q8N9I9 347 aa5.06□□□□□ -1.6
SBDSP1-204ENST00000453858 OR6K2Q8NGY2 324 aa5.06□□□□□ -1.6
SBDSP1-204ENST00000453858 ISG20Q96AZ6 181 aaKnown RBP5.06□□□□□ -1.6
SBDSP1-204ENST00000453858 ZNF274Q96GC6 653 aaPredicted RBP5.06□□□□□ -1.6
SBDSP1-204ENST00000453858 CALML4Q96GE6 196 aa5.06□□□□□ -1.6
SBDSP1-204ENST00000453858 KLHL32Q96NJ5 620 aa5.06□□□□□ -1.6
SBDSP1-204ENST00000453858 TEX101Q9BY14 249 aa5.06□□□□□ -1.6
SBDSP1-204ENST00000453858 LHPPQ9H008 270 aa5.06□□□□□ -1.6
SBDSP1-204ENST00000453858 KCND1Q9NSA2 647 aa5.06□□□□□ -1.6
SBDSP1-204ENST00000453858 GALNT8Q9NY28 637 aa5.06□□□□□ -1.6
SBDSP1-204ENST00000453858 TBC1D29Q9UFV1 150 aa5.06□□□□□ -1.6
SBDSP1-204ENST00000453858 FBXL4Q9UKA2 621 aa5.06□□□□□ -1.6
SBDSP1-204ENST00000453858 WBP11Q9Y2W2 641 aaKnown RBP5.06□□□□□ -1.6
SBDSP1-204ENST00000453858 ACTL7AQ9Y615 435 aa5.06□□□□□ -1.6
SBDSP1-204ENST00000453858 PHF3Q92576 2039 aaKnown RBP5.06□□□□□ -1.6
SBDSP1-204ENST00000453858 hCG_2014768A0A024R1R8 64 aa5.05□□□□□ -1.6
SBDSP1-204ENST00000453858 C17orf113A0A1B0GUU1 675 aa5.05□□□□□ -1.6
SBDSP1-204ENST00000453858 DVL2O14641 736 aa5.05□□□□□ -1.6
SBDSP1-204ENST00000453858 ASNA1O43681 348 aa5.05□□□□□ -1.6
SBDSP1-204ENST00000453858 DNAJB6O75190 326 aa5.05□□□□□ -1.6
SBDSP1-204ENST00000453858 RASSF9O75901 435 aa5.05□□□□□ -1.6
SBDSP1-204ENST00000453858 CDKL5O76039 1030 aa5.05□□□□□ -1.6
SBDSP1-204ENST00000453858 UBXN7O94888 489 aa5.05□□□□□ -1.6
SBDSP1-204ENST00000453858 VENTXO95231 258 aa5.05□□□□□ -1.6
SBDSP1-204ENST00000453858 TSPAN12O95859 305 aa5.05□□□□□ -1.6
SBDSP1-204ENST00000453858 IGLV3-25P01717 112 aa5.05□□□□□ -1.6
SBDSP1-204ENST00000453858 HRGP04196 525 aa5.05□□□□□ -1.6
SBDSP1-204ENST00000453858 KRT1P04264 644 aa5.05□□□□□ -1.6
SBDSP1-204ENST00000453858 DLATP10515 647 aaKnown RBP5.05□□□□□ -1.6
SBDSP1-204ENST00000453858 PAX1P15863 534 aa5.05□□□□□ -1.6
SBDSP1-204ENST00000453858 XBP1P17861 261 aa5.05□□□□□ -1.6
SBDSP1-204ENST00000453858 MC3RP41968 323 aa5.05□□□□□ -1.6
SBDSP1-204ENST00000453858 SERPINH1P50454 418 aaKnown RBP5.05□□□□□ -1.6
SBDSP1-204ENST00000453858 DAOAP59103 153 aa5.05□□□□□ -1.6
SBDSP1-204ENST00000453858 PPP1CAP62136 330 aa5.05□□□□□ -1.6
SBDSP1-204ENST00000453858 UBE2IP63279 158 aaKnown RBP5.05□□□□□ -1.6
SBDSP1-204ENST00000453858 TUBB4BP68371 445 aa5.05□□□□□ -1.6
SBDSP1-204ENST00000453858 ACY1Q03154 408 aa5.05□□□□□ -1.6
SBDSP1-204ENST00000453858 SLC20A2Q08357 652 aa5.05□□□□□ -1.6
SBDSP1-204ENST00000453858 ABRQ12979 859 aa5.05□□□□□ -1.6
SBDSP1-204ENST00000453858 TRPC3Q13507 836 aa5.05□□□□□ -1.6
SBDSP1-204ENST00000453858 TUBB2AQ13885 445 aa5.05□□□□□ -1.6
SBDSP1-204ENST00000453858 KRT32Q14532 448 aa5.05□□□□□ -1.6
SBDSP1-204ENST00000453858 PSMD6Q15008 389 aa5.05□□□□□ -1.6
SBDSP1-204ENST00000453858 FLYWCH1Q4VC44 716 aa5.05□□□□□ -1.6
SBDSP1-204ENST00000453858 ZNF667Q5HYK9 610 aa5.05□□□□□ -1.6
SBDSP1-204ENST00000453858 L1TD1Q5T7N2 865 aaKnown RBP5.05□□□□□ -1.6
SBDSP1-204ENST00000453858 KIAA0930Q6ICG6 404 aaPredicted RBP5.05□□□□□ -1.6
SBDSP1-204ENST00000453858 TIGD7Q6NT04 549 aaPredicted RBP5.05□□□□□ -1.6
SBDSP1-204ENST00000453858 CYB5D1Q6P9G0 228 aa5.05□□□□□ -1.6
SBDSP1-204ENST00000453858 USP45Q70EL2 814 aa5.05□□□□□ -1.6
SBDSP1-204ENST00000453858 STRA8Q7Z7C7 330 aa5.05□□□□□ -1.6
SBDSP1-204ENST00000453858 GPBP1Q86WP2 473 aa5.05□□□□□ -1.6
SBDSP1-204ENST00000453858 CHSY1Q86X52 802 aa5.05□□□□□ -1.6
SBDSP1-204ENST00000453858 ZNF354CQ86Y25 554 aa5.05□□□□□ -1.6
SBDSP1-204ENST00000453858 DIS3L2Q8IYB7 885 aaKnown RBP5.05□□□□□ -1.6
SBDSP1-204ENST00000453858 LGI4Q8N135 537 aa5.05□□□□□ -1.6
SBDSP1-204ENST00000453858 LIX1Q8N485 282 aa5.05□□□□□ -1.6
SBDSP1-204ENST00000453858 RPRMLQ8N4K4 120 aa5.05□□□□□ -1.6
SBDSP1-204ENST00000453858 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP5.05□□□□□ -1.6
SBDSP1-204ENST00000453858 ZNF610Q8N9Z0 462 aa5.05□□□□□ -1.6
SBDSP1-204ENST00000453858 ANKRD52Q8NB46 1076 aa5.05□□□□□ -1.6
SBDSP1-204ENST00000453858 HIPK4Q8NE63 616 aa5.05□□□□□ -1.6
SBDSP1-204ENST00000453858 OR2Y1Q8NGV0 311 aa5.05□□□□□ -1.6
SBDSP1-204ENST00000453858 DQX1Q8TE96 717 aaKnown RBP5.05□□□□□ -1.6
SBDSP1-204ENST00000453858 IGFBPL1Q8WX77 278 aa5.05□□□□□ -1.6
SBDSP1-204ENST00000453858 ASB15Q8WXK1 588 aa5.05□□□□□ -1.6
SBDSP1-204ENST00000453858 RND1Q92730 232 aa5.05□□□□□ -1.6
SBDSP1-204ENST00000453858 HMCESQ96FZ2 354 aa5.05□□□□□ -1.6
SBDSP1-204ENST00000453858 BTN2A3PQ96KV6 586 aa5.05□□□□□ -1.6
SBDSP1-204ENST00000453858 C16orf92Q96LL3 132 aa5.05□□□□□ -1.6
SBDSP1-204ENST00000453858 ACCSQ96QU6 501 aa5.05□□□□□ -1.6
SBDSP1-204ENST00000453858 PLIN2Q99541 437 aa5.05□□□□□ -1.6
SBDSP1-204ENST00000453858 FOXB1Q99853 325 aa5.05□□□□□ -1.6
SBDSP1-204ENST00000453858 GORASP1Q9BQQ3 440 aa5.05□□□□□ -1.6
SBDSP1-204ENST00000453858 TUBB2BQ9BVA1 445 aa5.05□□□□□ -1.6
SBDSP1-204ENST00000453858 LDHAL6BQ9BYZ2 381 aaPredicted RBP5.05□□□□□ -1.6
SBDSP1-204ENST00000453858 RAB33BQ9H082 229 aa5.05□□□□□ -1.6
SBDSP1-204ENST00000453858 ESRP2Q9H6T0 727 aaKnown RBP5.05□□□□□ -1.6
SBDSP1-204ENST00000453858 EMC7Q9NPA0 242 aa5.05□□□□□ -1.6
SBDSP1-204ENST00000453858 BLOC1S4Q9NUP1 217 aa5.05□□□□□ -1.6
SBDSP1-204ENST00000453858 TMEM160Q9NX00 188 aa5.05□□□□□ -1.6
SBDSP1-204ENST00000453858 CPNE7Q9UBL6 633 aa5.05□□□□□ -1.6
SBDSP1-204ENST00000453858 MOSPD1Q9UJG1 213 aa5.05□□□□□ -1.6
SBDSP1-204ENST00000453858 CFAP69A5D8W1 941 aa5.04□□□□□ -1.6
SBDSP1-204ENST00000453858 DBX1A6NMT0 343 aa5.04□□□□□ -1.6
SBDSP1-204ENST00000453858 F5H5T6 163 aa5.04□□□□□ -1.6
SBDSP1-204ENST00000453858 PRRG2O14669 202 aa5.04□□□□□ -1.6
SBDSP1-204ENST00000453858 CPLX1O14810 134 aa5.04□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms