RNA–Protein interactions for RNA: ENST00000451492.5

USP54-207, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 4

Gene USP54, Length 509 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-207ENST00000451492 ZNF501Q96CX3 271 aaPredicted RBP9.38□□□□□ -0.91
USP54-207ENST00000451492 CLIP3Q96DZ5 547 aa9.38□□□□□ -0.91
USP54-207ENST00000451492 PBKQ96KB5 322 aa9.38□□□□□ -0.91
USP54-207ENST00000451492 IL17FQ96PD4 163 aa9.38□□□□□ -0.91
USP54-207ENST00000451492 OSBPL9Q96SU4 736 aa9.38□□□□□ -0.91
USP54-207ENST00000451492 TUBB2BQ9BVA1 445 aa9.38□□□□□ -0.91
USP54-207ENST00000451492 FAM117AQ9C073 453 aa9.38□□□□□ -0.91
USP54-207ENST00000451492 TWSG1Q9GZX9 223 aa9.38□□□□□ -0.91
USP54-207ENST00000451492 TFB2MQ9H5Q4 396 aaKnown RBP9.38□□□□□ -0.91
USP54-207ENST00000451492 AKIRIN1Q9H9L7 192 aaPredicted RBP9.38□□□□□ -0.91
USP54-207ENST00000451492 C1GALT1Q9NS00 363 aa9.38□□□□□ -0.91
USP54-207ENST00000451492 KCND1Q9NSA2 647 aa9.38□□□□□ -0.91
USP54-207ENST00000451492 HOMER3Q9NSC5 361 aa9.38□□□□□ -0.91
USP54-207ENST00000451492 TREX1Q9NSU2 369 aa9.38□□□□□ -0.91
USP54-207ENST00000451492 IRAK4Q9NWZ3 460 aa9.38□□□□□ -0.91
USP54-207ENST00000451492 SPHK1Q9NYA1 384 aa9.38□□□□□ -0.91
USP54-207ENST00000451492 SEMA5BQ9P283 1151 aa9.38□□□□□ -0.91
USP54-207ENST00000451492 GNPTGQ9UJJ9 305 aa9.38□□□□□ -0.91
USP54-207ENST00000451492 RIMKLBQ9ULI2 386 aa9.38□□□□□ -0.91
USP54-207ENST00000451492 PCDHB3Q9Y5E6 796 aa9.38□□□□□ -0.91
USP54-207ENST00000451492 SPTBP11277 2137 aa9.38□□□□□ -0.91
USP54-207ENST00000451492 BAHCC1Q9P281 2608 aa9.37□□□□□ -0.91
USP54-207ENST00000451492 USP27XA6NNY8 438 aa9.37□□□□□ -0.91
USP54-207ENST00000451492 F8W8V4 182 aa9.37□□□□□ -0.91
USP54-207ENST00000451492 MATN2O00339 956 aa9.37□□□□□ -0.91
USP54-207ENST00000451492 PRMT5O14744 637 aaPredicted RBP9.37□□□□□ -0.91
USP54-207ENST00000451492 ZSCAN12O43309 604 aa9.37□□□□□ -0.91
USP54-207ENST00000451492 MAP3K7O43318 606 aa9.37□□□□□ -0.91
USP54-207ENST00000451492 PHF2O75151 1096 aa9.37□□□□□ -0.91
USP54-207ENST00000451492 NIPSNAP2O75323 286 aa9.37□□□□□ -0.91
USP54-207ENST00000451492 MT-ND3P03897 115 aa9.37□□□□□ -0.91
USP54-207ENST00000451492 APOA4P06727 396 aa9.37□□□□□ -0.91
USP54-207ENST00000451492 CHRM5P08912 532 aaPredicted RBP9.37□□□□□ -0.91
USP54-207ENST00000451492 ACADLP28330 430 aa9.37□□□□□ -0.91
USP54-207ENST00000451492 PEBP1P30086 187 aaKnown RBP9.37□□□□□ -0.91
USP54-207ENST00000451492 FMO4P31512 558 aa9.37□□□□□ -0.91
USP54-207ENST00000451492 SHMT2P34897 504 aa9.37□□□□□ -0.91
USP54-207ENST00000451492 CCR10P46092 362 aa9.37□□□□□ -0.91
USP54-207ENST00000451492 SARNPP82979 210 aaKnown RBP9.37□□□□□ -0.91
USP54-207ENST00000451492 GPS2Q13227 327 aa9.37□□□□□ -0.91
USP54-207ENST00000451492 KCNAB2Q13303 367 aa9.37□□□□□ -0.91
USP54-207ENST00000451492 FAM69BQ5VUD6 431 aa9.37□□□□□ -0.91
USP54-207ENST00000451492 CNSTQ6PJW8 725 aa9.37□□□□□ -0.91
USP54-207ENST00000451492 CDHR3Q6ZTQ4 885 aa9.37□□□□□ -0.91
USP54-207ENST00000451492 PTRH1Q86Y79 214 aaKnown RBP9.37□□□□□ -0.91
USP54-207ENST00000451492 SPNS2Q8IVW8 549 aa9.37□□□□□ -0.91
USP54-207ENST00000451492 SLC22A15Q8IZD6 547 aa9.37□□□□□ -0.91
USP54-207ENST00000451492 RASGEF1CQ8N431 466 aa9.37□□□□□ -0.91
USP54-207ENST00000451492 C19orf47Q8N9M1 422 aaKnown RBP9.37□□□□□ -0.91
USP54-207ENST00000451492 OR1L3Q8NH93 324 aa9.37□□□□□ -0.91
USP54-207ENST00000451492 GSDMBQ8TAX9 411 aa9.37□□□□□ -0.91
USP54-207ENST00000451492 CPT1BQ92523 772 aa9.37□□□□□ -0.91
USP54-207ENST00000451492 CAPZA3Q96KX2 299 aa9.37□□□□□ -0.91
USP54-207ENST00000451492 TRAPPC9Q96Q05 1148 aa9.37□□□□□ -0.91
USP54-207ENST00000451492 ACTL8Q9H568 366 aa9.37□□□□□ -0.91
USP54-207ENST00000451492 POLG2Q9UHN1 485 aa9.37□□□□□ -0.91
USP54-207ENST00000451492 PADI1Q9ULC6 663 aa9.37□□□□□ -0.91
USP54-207ENST00000451492 SOX13Q9UN79 622 aa9.37□□□□□ -0.91
USP54-207ENST00000451492 BTRCQ9Y297 605 aa9.37□□□□□ -0.91
USP54-207ENST00000451492 KLHL20Q9Y2M5 609 aa9.37□□□□□ -0.91
USP54-207ENST00000451492 CRYL1Q9Y2S2 319 aa9.37□□□□□ -0.91
USP54-207ENST00000451492 NFS1Q9Y697 457 aa9.37□□□□□ -0.91
USP54-207ENST00000451492 NUP210LQ5VU65 1888 aa9.36□□□□□ -0.91
USP54-207ENST00000451492 CFAP46Q8IYW2 2715 aa9.36□□□□□ -0.91
USP54-207ENST00000451492 A0A0J9YY10 115 aa9.36□□□□□ -0.91
USP54-207ENST00000451492 GOLGA6L10A0A0M3HER8 536 aa9.36□□□□□ -0.91
USP54-207ENST00000451492 B8ZZF3 427 aa9.36□□□□□ -0.91
USP54-207ENST00000451492 AP3B1O00203 1094 aa9.36□□□□□ -0.91
USP54-207ENST00000451492 KIF5CO60282 957 aa9.36□□□□□ -0.91
USP54-207ENST00000451492 CTSBP07858 339 aa9.36□□□□□ -0.91
USP54-207ENST00000451492 TPBGLP0DKB5 382 aa9.36□□□□□ -0.91
USP54-207ENST00000451492 PAMP19021 973 aa9.36□□□□□ -0.91
USP54-207ENST00000451492 NR1D1P20393 614 aa9.36□□□□□ -0.91
USP54-207ENST00000451492 ARNTP27540 789 aa9.36□□□□□ -0.91
USP54-207ENST00000451492 AOAHP28039 575 aa9.36□□□□□ -0.91
USP54-207ENST00000451492 PKLRP30613 574 aa9.36□□□□□ -0.91
USP54-207ENST00000451492 MC1RQ01726 317 aa9.36□□□□□ -0.91
USP54-207ENST00000451492 CHAF1BQ13112 559 aa9.36□□□□□ -0.91
USP54-207ENST00000451492 DHX34Q14147 1143 aaKnown RBP9.36□□□□□ -0.91
USP54-207ENST00000451492 SLC9A5Q14940 896 aa9.36□□□□□ -0.91
USP54-207ENST00000451492 PPP1R7Q15435 360 aa9.36□□□□□ -0.91
USP54-207ENST00000451492 PTCHD3Q3KNS1 767 aa9.36□□□□□ -0.91
USP54-207ENST00000451492 CTSL3PQ5NE16 218 aa9.36□□□□□ -0.91
USP54-207ENST00000451492 C1orf189Q5VU69 101 aa9.36□□□□□ -0.91
USP54-207ENST00000451492 LCN10Q6JVE6 187 aa9.36□□□□□ -0.91
USP54-207ENST00000451492 MRNIPQ6NTE8 343 aa9.36□□□□□ -0.91
USP54-207ENST00000451492 OTOAQ7RTW8 1153 aa9.36□□□□□ -0.91
USP54-207ENST00000451492 CAND1Q86VP6 1230 aaKnown RBP9.36□□□□□ -0.91
USP54-207ENST00000451492 SLC38A9Q8NBW4 561 aa9.36□□□□□ -0.91
USP54-207ENST00000451492 ASZ1Q8WWH4 475 aa9.36□□□□□ -0.91
USP54-207ENST00000451492 ANP32BQ92688 251 aaKnown RBP9.36□□□□□ -0.91
USP54-207ENST00000451492 PEX13Q92968 403 aa9.36□□□□□ -0.91
USP54-207ENST00000451492 CATSPER2Q96P56 530 aa9.36□□□□□ -0.91
USP54-207ENST00000451492 SERPINB12Q96P63 405 aa9.36□□□□□ -0.91
USP54-207ENST00000451492 PANX3Q96QZ0 392 aa9.36□□□□□ -0.91
USP54-207ENST00000451492 OR2A14Q96R47 310 aa9.36□□□□□ -0.91
USP54-207ENST00000451492 NAP1L3Q99457 506 aaPredicted RBP9.36□□□□□ -0.91
USP54-207ENST00000451492 KIFC1Q9BW19 673 aa9.36□□□□□ -0.91
USP54-207ENST00000451492 CARD6Q9BX69 1037 aa9.36□□□□□ -0.91
USP54-207ENST00000451492 P2RY12Q9H244 342 aa9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 69.1 ms