RNA–Protein interactions for RNA: ENST00000451053.2

VPS33A-202, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 3 BASIC

Gene VPS33A, Length 1,154 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-202ENST00000451053 MKS1Q9NXB0 559 aa12.69□□□□□ -0.38
VPS33A-202ENST00000451053 FAM53CQ9NYF3 392 aa12.69□□□□□ -0.38
VPS33A-202ENST00000451053 A0A087X1B8 175 aa12.68□□□□□ -0.38
VPS33A-202ENST00000451053 A0A1W2PPM1 405 aa12.68□□□□□ -0.38
VPS33A-202ENST00000451053 LILRA5A6NI73 299 aa12.68□□□□□ -0.38
VPS33A-202ENST00000451053 COPEO14579 308 aa12.68□□□□□ -0.38
VPS33A-202ENST00000451053 B4GAT1O43505 415 aa12.68□□□□□ -0.38
VPS33A-202ENST00000451053 RFPL3O75679 317 aa12.68□□□□□ -0.38
VPS33A-202ENST00000451053 MATN4O95460 622 aa12.68□□□□□ -0.38
VPS33A-202ENST00000451053 GP1BAP07359 652 aa12.68□□□□□ -0.38
VPS33A-202ENST00000451053 FTH1P19P0C7X4 201 aa12.68□□□□□ -0.38
VPS33A-202ENST00000451053 TPBGLP0DKB5 382 aa12.68□□□□□ -0.38
VPS33A-202ENST00000451053 PYGBP11216 843 aa12.68□□□□□ -0.38
VPS33A-202ENST00000451053 COL6A2P12110 1019 aa12.68□□□□□ -0.38
VPS33A-202ENST00000451053 PNLIPP16233 465 aa12.68□□□□□ -0.38
VPS33A-202ENST00000451053 NR1D1P20393 614 aa12.68□□□□□ -0.38
VPS33A-202ENST00000451053 KCNA4P22459 653 aa12.68□□□□□ -0.38
VPS33A-202ENST00000451053 OAS2P29728 719 aaKnown RBP12.68□□□□□ -0.38
VPS33A-202ENST00000451053 ALDH4A1P30038 563 aa12.68□□□□□ -0.38
VPS33A-202ENST00000451053 CCNFP41002 786 aa12.68□□□□□ -0.38
VPS33A-202ENST00000451053 CCT5P48643 541 aa12.68□□□□□ -0.38
VPS33A-202ENST00000451053 RGS4P49798 205 aa12.68□□□□□ -0.38
VPS33A-202ENST00000451053 CSRP3P50461 194 aa12.68□□□□□ -0.38
VPS33A-202ENST00000451053 KPNA2P52292 529 aaKnown RBP12.68□□□□□ -0.38
VPS33A-202ENST00000451053 IL2P60568 153 aa12.68□□□□□ -0.38
VPS33A-202ENST00000451053 PRKG2Q13237 762 aa12.68□□□□□ -0.38
VPS33A-202ENST00000451053 CCSMST1Q4G0I0 132 aa12.68□□□□□ -0.38
VPS33A-202ENST00000451053 SPRED1Q7Z699 444 aa12.68□□□□□ -0.38
VPS33A-202ENST00000451053 RBM12BQ8IXT5 1001 aaKnown RBP12.68□□□□□ -0.38
VPS33A-202ENST00000451053 TBC1D21Q8IYX1 336 aa12.68□□□□□ -0.38
VPS33A-202ENST00000451053 OR5K2Q8NHB8 316 aa12.68□□□□□ -0.38
VPS33A-202ENST00000451053 SH3KBP1Q96B97 665 aa12.68□□□□□ -0.38
VPS33A-202ENST00000451053 APOPT1Q96IL0 206 aa12.68□□□□□ -0.38
VPS33A-202ENST00000451053 SLC38A3Q99624 504 aa12.68□□□□□ -0.38
VPS33A-202ENST00000451053 TRIT1Q9H3H1 467 aaKnown RBP12.68□□□□□ -0.38
VPS33A-202ENST00000451053 KIR3DX1Q9H7L2 352 aa12.68□□□□□ -0.38
VPS33A-202ENST00000451053 CNOT10Q9H9A5 744 aaKnown RBP12.68□□□□□ -0.38
VPS33A-202ENST00000451053 UCK1Q9HA47 277 aa12.68□□□□□ -0.38
VPS33A-202ENST00000451053 SYTL2Q9HCH5 934 aa12.68□□□□□ -0.38
VPS33A-202ENST00000451053 GPAMQ9HCL2 828 aa12.68□□□□□ -0.38
VPS33A-202ENST00000451053 KCNK4Q9NYG8 393 aa12.68□□□□□ -0.38
VPS33A-202ENST00000451053 CAMSAP3Q9P1Y5 1249 aaPredicted RBP12.68□□□□□ -0.38
VPS33A-202ENST00000451053 CIDEBQ9UHD4 219 aa12.68□□□□□ -0.38
VPS33A-202ENST00000451053 IKZF3Q9UKT9 509 aa12.68□□□□□ -0.38
VPS33A-202ENST00000451053 COLEC10Q9Y6Z7 277 aa12.68□□□□□ -0.38
VPS33A-202ENST00000451053 DNAH14Q0VDD8 3507 aa12.68□□□□□ -0.38
VPS33A-202ENST00000451053 A0A096LPK6 155 aa12.67□□□□□ -0.38
VPS33A-202ENST00000451053 A0A1W2PQM1 296 aa12.67□□□□□ -0.38
VPS33A-202ENST00000451053 KRT87PA6NCN2 255 aa12.67□□□□□ -0.38
VPS33A-202ENST00000451053 ARHGEF33A8MVX0 844 aa12.67□□□□□ -0.38
VPS33A-202ENST00000451053 PRPF4O43172 522 aaKnown RBP eCLIP12.67□□□□□ -0.38
VPS33A-202ENST00000451053 GLRA3O75311 464 aa12.67□□□□□ -0.38
VPS33A-202ENST00000451053 PSIP1O75475 530 aaKnown RBP12.67□□□□□ -0.38
VPS33A-202ENST00000451053 C1orf105O95561 183 aa12.67□□□□□ -0.38
VPS33A-202ENST00000451053 RPLP0P05388 317 aaKnown RBP12.67□□□□□ -0.38
VPS33A-202ENST00000451053 GSTA1P08263 222 aa12.67□□□□□ -0.38
VPS33A-202ENST00000451053 SLC35E2BP0CK96 405 aa12.67□□□□□ -0.38
VPS33A-202ENST00000451053 NDUFS1P28331 727 aa12.67□□□□□ -0.38
VPS33A-202ENST00000451053 HPDP32754 393 aaPredicted RBP12.67□□□□□ -0.38
VPS33A-202ENST00000451053 SLC26A3P40879 764 aa12.67□□□□□ -0.38
VPS33A-202ENST00000451053 MAPK9P45984 424 aa12.67□□□□□ -0.38
VPS33A-202ENST00000451053 GPR3P46089 330 aa12.67□□□□□ -0.38
VPS33A-202ENST00000451053 SLC18A1P54219 525 aa12.67□□□□□ -0.38
VPS33A-202ENST00000451053 PPP2R2AP63151 447 aa12.67□□□□□ -0.38
VPS33A-202ENST00000451053 CCL7P80098 99 aa12.67□□□□□ -0.38
VPS33A-202ENST00000451053 SLC18A2Q05940 514 aa12.67□□□□□ -0.38
VPS33A-202ENST00000451053 GRB7Q14451 532 aa12.67□□□□□ -0.38
VPS33A-202ENST00000451053 EEF1AKMT2Q5JPI9 291 aaKnown RBP12.67□□□□□ -0.38
VPS33A-202ENST00000451053 NKAIN2Q5VXU1 208 aa12.67□□□□□ -0.38
VPS33A-202ENST00000451053 LRRC8EQ6NSJ5 796 aa12.67□□□□□ -0.38
VPS33A-202ENST00000451053 TBC1D1Q86TI0 1168 aaPredicted RBP12.67□□□□□ -0.38
VPS33A-202ENST00000451053 RASGRP3Q8IV61 690 aa12.67□□□□□ -0.38
VPS33A-202ENST00000451053 DCUN1D3Q8IWE4 304 aa12.67□□□□□ -0.38
VPS33A-202ENST00000451053 C4orf33Q8N1A6 199 aa12.67□□□□□ -0.38
VPS33A-202ENST00000451053 MYO1HQ8N1T3 1032 aa12.67□□□□□ -0.38
VPS33A-202ENST00000451053 SPATA6LQ8N4H0 392 aa12.67□□□□□ -0.38
VPS33A-202ENST00000451053 NKAPQ8N5F7 415 aaKnown RBP12.67□□□□□ -0.38
VPS33A-202ENST00000451053 OR52E1Q8NGJ3 308 aa12.67□□□□□ -0.38
VPS33A-202ENST00000451053 FAM76AQ8TAV0 307 aa12.67□□□□□ -0.38
VPS33A-202ENST00000451053 ASB11Q8WXH4 323 aa12.67□□□□□ -0.38
VPS33A-202ENST00000451053 FOPNLQ96NB1 174 aa12.67□□□□□ -0.38
VPS33A-202ENST00000451053 LDHAL6BQ9BYZ2 381 aaPredicted RBP12.67□□□□□ -0.38
VPS33A-202ENST00000451053 UNKQ9C0B0 810 aaKnown RBP12.67□□□□□ -0.38
VPS33A-202ENST00000451053 VPS11Q9H270 941 aa12.67□□□□□ -0.38
VPS33A-202ENST00000451053 SYNDIG1Q9H7V2 258 aa12.67□□□□□ -0.38
VPS33A-202ENST00000451053 PCMTD2Q9NV79 361 aa12.67□□□□□ -0.38
VPS33A-202ENST00000451053 OGFRQ9NZT2 677 aa12.67□□□□□ -0.38
VPS33A-202ENST00000451053 DCDC2Q9UHG0 476 aa12.67□□□□□ -0.38
VPS33A-202ENST00000451053 ADAMTS6Q9UKP5 1117 aa12.67□□□□□ -0.38
VPS33A-202ENST00000451053 PLAGL1Q9UM63 463 aa12.67□□□□□ -0.38
VPS33A-202ENST00000451053 TDRKHQ9Y2W6 561 aaKnown RBP12.67□□□□□ -0.38
VPS33A-202ENST00000451053 ACOT9Q9Y305 439 aa12.67□□□□□ -0.38
VPS33A-202ENST00000451053 IGHV1OR21-1A0A087WYE8 117 aa12.66□□□□□ -0.38
VPS33A-202ENST00000451053 NPEPPSL1A6NEC2 478 aa12.66□□□□□ -0.38
VPS33A-202ENST00000451053 GFYI3L273 518 aa12.66□□□□□ -0.38
VPS33A-202ENST00000451053 GOLGA8RI6L899 631 aa12.66□□□□□ -0.38
VPS33A-202ENST00000451053 TM9SF1O15321 606 aa12.66□□□□□ -0.38
VPS33A-202ENST00000451053 DKK1O94907 266 aa12.66□□□□□ -0.38
VPS33A-202ENST00000451053 ZWINTO95229 277 aa12.66□□□□□ -0.38
VPS33A-202ENST00000451053 RPN2P04844 631 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms