RNA–Protein interactions for RNA: ENST00000450303.6

PRPF40A-204, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 3

Gene PRPF40A, Length 496 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-204ENST00000450303 CDKN1CP49918 316 aaPredicted RBP16.63■□□□□ 0.25
PRPF40A-204ENST00000450303 MC2RQ01718 297 aa16.63■□□□□ 0.25
PRPF40A-204ENST00000450303 DMPKQ09013 629 aa16.63■□□□□ 0.25
PRPF40A-204ENST00000450303 RPE65Q16518 533 aa16.63■□□□□ 0.25
PRPF40A-204ENST00000450303 TUBB8Q3ZCM7 444 aa16.63■□□□□ 0.25
PRPF40A-204ENST00000450303 HSP90AA5PQ58FG0 334 aa16.63■□□□□ 0.25
PRPF40A-204ENST00000450303 CTAGE3PQ8IX95 158 aa16.63■□□□□ 0.25
PRPF40A-204ENST00000450303 HEXDCQ8WVB3 486 aa16.63■□□□□ 0.25
PRPF40A-204ENST00000450303 NKD1Q969G9 470 aa16.63■□□□□ 0.25
PRPF40A-204ENST00000450303 TCF12Q99081 682 aa16.63■□□□□ 0.25
PRPF40A-204ENST00000450303 DDA1Q9BW61 102 aa16.63■□□□□ 0.25
PRPF40A-204ENST00000450303 WWP1Q9H0M0 922 aa16.63■□□□□ 0.25
PRPF40A-204ENST00000450303 ACSS3Q9H6R3 686 aa16.63■□□□□ 0.25
PRPF40A-204ENST00000450303 ADAM21Q9UKJ8 722 aa16.63■□□□□ 0.25
PRPF40A-204ENST00000450303 DNMT3AQ9Y6K1 912 aaPredicted RBP16.63■□□□□ 0.25
PRPF40A-204ENST00000450303 IKBKGQ9Y6K9 419 aa16.63■□□□□ 0.25
PRPF40A-204ENST00000450303 MN1Q10571 1320 aaPredicted RBP16.63■□□□□ 0.25
PRPF40A-204ENST00000450303 MGAT4DA6NG13 374 aa16.62■□□□□ 0.25
PRPF40A-204ENST00000450303 OR51F1A6NGY5 319 aa16.62■□□□□ 0.25
PRPF40A-204ENST00000450303 IQCJ-SCHIP1C9J366 451 aaPredicted RBP16.62■□□□□ 0.25
PRPF40A-204ENST00000450303 TK2O00142 265 aa16.62■□□□□ 0.25
PRPF40A-204ENST00000450303 SYF2O95926 243 aaKnown RBP16.62■□□□□ 0.25
PRPF40A-204ENST00000450303 C9P02748 559 aa16.62■□□□□ 0.25
PRPF40A-204ENST00000450303 PRSS56P0CW18 603 aa16.62■□□□□ 0.25
PRPF40A-204ENST00000450303 ARNTP27540 789 aa16.62■□□□□ 0.25
PRPF40A-204ENST00000450303 CYP4F2P78329 520 aa16.62■□□□□ 0.25
PRPF40A-204ENST00000450303 TEDDM1Q5T9Z0 273 aa16.62■□□□□ 0.25
PRPF40A-204ENST00000450303 RNF187Q5TA31 235 aaPredicted RBP16.62■□□□□ 0.25
PRPF40A-204ENST00000450303 DUS1LQ6P1R4 473 aaKnown RBP16.62■□□□□ 0.25
PRPF40A-204ENST00000450303 TRMT10BQ6PF06 316 aaKnown RBP16.62■□□□□ 0.25
PRPF40A-204ENST00000450303 FAM92BQ6ZTR7 304 aa16.62■□□□□ 0.25
PRPF40A-204ENST00000450303 KIAA0408Q6ZU52 694 aa16.62■□□□□ 0.25
PRPF40A-204ENST00000450303 SLC26A11Q86WA9 606 aa16.62■□□□□ 0.25
PRPF40A-204ENST00000450303 CNPY4Q8N129 248 aa16.62■□□□□ 0.25
PRPF40A-204ENST00000450303 LSM14AQ8ND56 463 aaKnown RBP16.62■□□□□ 0.25
PRPF40A-204ENST00000450303 UHMK1Q8TAS1 419 aaKnown RBP16.62■□□□□ 0.25
PRPF40A-204ENST00000450303 DCUN1D1Q96GG9 259 aa16.62■□□□□ 0.25
PRPF40A-204ENST00000450303 INSM2Q96T92 566 aaPredicted RBP16.62■□□□□ 0.25
PRPF40A-204ENST00000450303 SH3GL2Q99962 352 aa16.62■□□□□ 0.25
PRPF40A-204ENST00000450303 ASPSCR1Q9BZE9 553 aa16.62■□□□□ 0.25
PRPF40A-204ENST00000450303 PPCSQ9HAB8 311 aa16.62■□□□□ 0.25
PRPF40A-204ENST00000450303 PLAC1Q9HBJ0 212 aa16.62■□□□□ 0.25
PRPF40A-204ENST00000450303 IMP3Q9NV31 184 aaKnown RBP16.62■□□□□ 0.25
PRPF40A-204ENST00000450303 FAM159BA6NKW6 160 aa16.61■□□□□ 0.25
PRPF40A-204ENST00000450303 F8W8V4 182 aa16.61■□□□□ 0.25
PRPF40A-204ENST00000450303 GOLGA8TH3BQL2 631 aa16.61■□□□□ 0.25
PRPF40A-204ENST00000450303 SGTAO43765 313 aa16.61■□□□□ 0.25
PRPF40A-204ENST00000450303 NDUFS3O75489 264 aa16.61■□□□□ 0.25
PRPF40A-204ENST00000450303 RASSF9O75901 435 aa16.61■□□□□ 0.25
PRPF40A-204ENST00000450303 RALBP11234 206 aa16.61■□□□□ 0.25
PRPF40A-204ENST00000450303 ATP1A2P50993 1020 aa16.61■□□□□ 0.25
PRPF40A-204ENST00000450303 RAB15P59190 212 aa16.61■□□□□ 0.25
PRPF40A-204ENST00000450303 PPP1CAP62136 330 aa16.61■□□□□ 0.25
PRPF40A-204ENST00000450303 FOXM1Q08050 763 aa16.61■□□□□ 0.25
PRPF40A-204ENST00000450303 IFFO1Q0D2I5 559 aa16.61■□□□□ 0.25
PRPF40A-204ENST00000450303 C19orf57Q0VDD7 668 aa16.61■□□□□ 0.25
PRPF40A-204ENST00000450303 ITIH4Q14624 930 aa16.61■□□□□ 0.25
PRPF40A-204ENST00000450303 KBTBD12Q3ZCT8 623 aa16.61■□□□□ 0.25
PRPF40A-204ENST00000450303 METRNLQ641Q3 311 aa16.61■□□□□ 0.25
PRPF40A-204ENST00000450303 ZNF470Q6ECI4 717 aa16.61■□□□□ 0.25
PRPF40A-204ENST00000450303 IRGCQ6NXR0 463 aa16.61■□□□□ 0.25
PRPF40A-204ENST00000450303 CROCCP2Q86T23 111 aa16.61■□□□□ 0.25
PRPF40A-204ENST00000450303 LRRC6Q86X45 466 aa16.61■□□□□ 0.25
PRPF40A-204ENST00000450303 CNTN4Q8IWV2 1026 aa16.61■□□□□ 0.25
PRPF40A-204ENST00000450303 CFAP206Q8IYR0 622 aa16.61■□□□□ 0.25
PRPF40A-204ENST00000450303 CACNA2D3Q8IZS8 1091 aa16.61■□□□□ 0.25
PRPF40A-204ENST00000450303 NXPE1Q8N323 547 aa16.61■□□□□ 0.25
PRPF40A-204ENST00000450303 LILRA3Q8N6C8 439 aaPredicted RBP16.61■□□□□ 0.25
PRPF40A-204ENST00000450303 IL22RA1Q8N6P7 574 aa16.61■□□□□ 0.25
PRPF40A-204ENST00000450303 SPDYE1Q8NFV5 336 aaPredicted RBP16.61■□□□□ 0.25
PRPF40A-204ENST00000450303 OR2L2Q8NH16 312 aa16.61■□□□□ 0.25
PRPF40A-204ENST00000450303 ZNF514Q96K75 400 aaPredicted RBP16.61■□□□□ 0.25
PRPF40A-204ENST00000450303 ZIM3Q96PE6 472 aa16.61■□□□□ 0.25
PRPF40A-204ENST00000450303 COPS8Q99627 209 aa16.61■□□□□ 0.25
PRPF40A-204ENST00000450303 SEMA4CQ9C0C4 833 aa16.61■□□□□ 0.25
PRPF40A-204ENST00000450303 FBXO8Q9NRD0 319 aa16.61■□□□□ 0.25
PRPF40A-204ENST00000450303 INTS10Q9NVR2 710 aaKnown RBP16.61■□□□□ 0.25
PRPF40A-204ENST00000450303 IL1RAPL1Q9NZN1 696 aa16.61■□□□□ 0.25
PRPF40A-204ENST00000450303 FBXO5Q9UKT4 447 aa16.61■□□□□ 0.25
PRPF40A-204ENST00000450303 PCDHGA4Q9Y5G9 962 aa16.61■□□□□ 0.25
PRPF40A-204ENST00000450303 TRBV5-4A0A0C4DH59 114 aa16.6■□□□□ 0.25
PRPF40A-204ENST00000450303 EXOC1LA0A1B0GW35 172 aa16.6■□□□□ 0.25
PRPF40A-204ENST00000450303 AGAP14A8MT82 685 aa16.6■□□□□ 0.25
PRPF40A-204ENST00000450303 CFAP99D6REC4 459 aa16.6■□□□□ 0.25
PRPF40A-204ENST00000450303 POLR1CO15160 346 aaPredicted RBP16.6■□□□□ 0.25
PRPF40A-204ENST00000450303 RAD1O60671 282 aa16.6■□□□□ 0.25
PRPF40A-204ENST00000450303 ACRV1P26436 265 aa16.6■□□□□ 0.25
PRPF40A-204ENST00000450303 CAPZBP47756 277 aa16.6■□□□□ 0.25
PRPF40A-204ENST00000450303 EIF3BP55884 814 aaKnown RBP16.6■□□□□ 0.25
PRPF40A-204ENST00000450303 SH3BP2P78314 561 aa16.6■□□□□ 0.25
PRPF40A-204ENST00000450303 UAP1Q16222 522 aaPredicted RBP16.6■□□□□ 0.25
PRPF40A-204ENST00000450303 BCL7AQ4VC05 210 aa16.6■□□□□ 0.25
PRPF40A-204ENST00000450303 CACHD1Q5VU97 1274 aa16.6■□□□□ 0.25
PRPF40A-204ENST00000450303 XKR5Q6UX68 686 aa16.6■□□□□ 0.25
PRPF40A-204ENST00000450303 CEACAM20Q6UY09 585 aa16.6■□□□□ 0.25
PRPF40A-204ENST00000450303 SERPINA9Q86WD7 417 aa16.6■□□□□ 0.25
PRPF40A-204ENST00000450303 CILP2Q8IUL8 1156 aa16.6■□□□□ 0.25
PRPF40A-204ENST00000450303 RBM12BQ8IXT5 1001 aaKnown RBP16.6■□□□□ 0.25
PRPF40A-204ENST00000450303 UNC5BQ8IZJ1 945 aa16.6■□□□□ 0.25
PRPF40A-204ENST00000450303 PPM1NQ8N819 430 aa16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms