RNA–Protein interactions for RNA: ENST00000449879.5

RAB11FIP3-204, Transcript of RAB11 family interacting protein 3, humanhuman

TSL 3

Gene RAB11FIP3, Length 580 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP3-204ENST00000449879 GSTM1P09488 218 aa16.04■□□□□ 0.16
RAB11FIP3-204ENST00000449879 ATXN8OSP0DMR3 200 aa16.04■□□□□ 0.16
RAB11FIP3-204ENST00000449879 MSNP26038 577 aaKnown RBP16.04■□□□□ 0.16
RAB11FIP3-204ENST00000449879 NSG1P42857 185 aa16.04■□□□□ 0.16
RAB11FIP3-204ENST00000449879 GSTM4Q03013 218 aa16.04■□□□□ 0.16
RAB11FIP3-204ENST00000449879 CCDC38Q502W7 563 aa16.04■□□□□ 0.16
RAB11FIP3-204ENST00000449879 SPESP1Q6UW49 350 aa16.04■□□□□ 0.16
RAB11FIP3-204ENST00000449879 FAM198BQ6UWH4 519 aa16.04■□□□□ 0.16
RAB11FIP3-204ENST00000449879 UNC5AQ6ZN44 842 aa16.04■□□□□ 0.16
RAB11FIP3-204ENST00000449879 TRIM73Q86UV7 250 aa16.04■□□□□ 0.16
RAB11FIP3-204ENST00000449879 GPR135Q8IZ08 494 aa16.04■□□□□ 0.16
RAB11FIP3-204ENST00000449879 SLC35B2Q8TB61 432 aa16.04■□□□□ 0.16
RAB11FIP3-204ENST00000449879 CPT1CQ8TCG5 803 aa16.04■□□□□ 0.16
RAB11FIP3-204ENST00000449879 ATG4AQ8WYN0 398 aa16.04■□□□□ 0.16
RAB11FIP3-204ENST00000449879 FAM60AQ9NP50 221 aa16.04■□□□□ 0.16
RAB11FIP3-204ENST00000449879 VPS4AQ9UN37 437 aa16.04■□□□□ 0.16
RAB11FIP3-204ENST00000449879 TDRKHQ9Y2W6 561 aaKnown RBP16.04■□□□□ 0.16
RAB11FIP3-204ENST00000449879 JRKLQ9Y4A0 524 aa16.04■□□□□ 0.16
RAB11FIP3-204ENST00000449879 SPTBN1Q01082 2364 aaKnown RBP16.04■□□□□ 0.16
RAB11FIP3-204ENST00000449879 USP9YO00507 2555 aaPredicted RBP16.03■□□□□ 0.16
RAB11FIP3-204ENST00000449879 USP9XQ93008 2570 aaPredicted RBP16.03■□□□□ 0.16
RAB11FIP3-204ENST00000449879 ESPL1Q14674 2120 aa16.03■□□□□ 0.16
RAB11FIP3-204ENST00000449879 CCDC88CQ9P219 2028 aa16.03■□□□□ 0.16
RAB11FIP3-204ENST00000449879 CCDC162PA2VCL2 907 aa16.03■□□□□ 0.16
RAB11FIP3-204ENST00000449879 MROH6A6NGR9 719 aa16.03■□□□□ 0.16
RAB11FIP3-204ENST00000449879 FTH1P02794 183 aa16.03■□□□□ 0.16
RAB11FIP3-204ENST00000449879 HBQ1P09105 142 aa16.03■□□□□ 0.16
RAB11FIP3-204ENST00000449879 AGXTP21549 392 aa16.03■□□□□ 0.16
RAB11FIP3-204ENST00000449879 LINC00523Q86TU6 105 aa16.03■□□□□ 0.16
RAB11FIP3-204ENST00000449879 ZBTB2Q8N680 514 aa16.03■□□□□ 0.16
RAB11FIP3-204ENST00000449879 DNAAF3Q8N9W5 541 aa16.03■□□□□ 0.16
RAB11FIP3-204ENST00000449879 FDCSPQ8NFU4 85 aa16.03■□□□□ 0.16
RAB11FIP3-204ENST00000449879 OR52K1Q8NGK4 314 aa16.03■□□□□ 0.16
RAB11FIP3-204ENST00000449879 MAIP1Q8WWC4 291 aa16.03■□□□□ 0.16
RAB11FIP3-204ENST00000449879 TBRG4Q969Z0 631 aaKnown RBP eCLIP16.03■□□□□ 0.164e-8■■■■■ 30.9
RAB11FIP3-204ENST00000449879 TRMT1Q9NXH9 659 aaKnown RBP16.03■□□□□ 0.16
RAB11FIP3-204ENST00000449879 SPTAN1Q13813 2472 aaKnown RBP16.03■□□□□ 0.16
RAB11FIP3-204ENST00000449879 C9J4A7 227 aa16.02■□□□□ 0.16
RAB11FIP3-204ENST00000449879 QSOX1O00391 747 aa16.02■□□□□ 0.16
RAB11FIP3-204ENST00000449879 LIASO43766 372 aa16.02■□□□□ 0.16
RAB11FIP3-204ENST00000449879 KIF5CO60282 957 aa16.02■□□□□ 0.16
RAB11FIP3-204ENST00000449879 OR2B3O76000 313 aa16.02■□□□□ 0.16
RAB11FIP3-204ENST00000449879 UGT2B7P16662 529 aa16.02■□□□□ 0.16
RAB11FIP3-204ENST00000449879 ACADLP28330 430 aa16.02■□□□□ 0.16
RAB11FIP3-204ENST00000449879 FOXN2P32314 431 aa16.02■□□□□ 0.16
RAB11FIP3-204ENST00000449879 SHMT2P34897 504 aa16.02■□□□□ 0.16
RAB11FIP3-204ENST00000449879 UQCRFS1P47985 274 aa16.02■□□□□ 0.16
RAB11FIP3-204ENST00000449879 ITIH4Q14624 930 aa16.02■□□□□ 0.16
RAB11FIP3-204ENST00000449879 NCF4Q15080 339 aa16.02■□□□□ 0.16
RAB11FIP3-204ENST00000449879 DEFB110Q30KQ9 67 aa16.02■□□□□ 0.16
RAB11FIP3-204ENST00000449879 MLIPQ5VWP3 458 aa16.02■□□□□ 0.16
RAB11FIP3-204ENST00000449879 PAPD7Q5XG87 772 aaKnown RBP16.02■□□□□ 0.16
RAB11FIP3-204ENST00000449879 TBC1D21Q8IYX1 336 aa16.02■□□□□ 0.16
RAB11FIP3-204ENST00000449879 C19orf47Q8N9M1 422 aaKnown RBP16.02■□□□□ 0.16
RAB11FIP3-204ENST00000449879 TMEM102Q8N9M5 508 aaPredicted RBP16.02■□□□□ 0.16
RAB11FIP3-204ENST00000449879 TCTN2Q96GX1 697 aa16.02■□□□□ 0.16
RAB11FIP3-204ENST00000449879 OR2A14Q96R47 310 aa16.02■□□□□ 0.16
RAB11FIP3-204ENST00000449879 DPH2Q9BQC3 489 aaPredicted RBP16.02■□□□□ 0.16
RAB11FIP3-204ENST00000449879 MFRPQ9BY79 579 aa16.02■□□□□ 0.16
RAB11FIP3-204ENST00000449879 SPRTNQ9H040 489 aaPredicted RBP16.02■□□□□ 0.16
RAB11FIP3-204ENST00000449879 SPHK1Q9NYA1 384 aa16.02■□□□□ 0.16
RAB11FIP3-204ENST00000449879 POLG2Q9UHN1 485 aa16.02■□□□□ 0.16
RAB11FIP3-204ENST00000449879 PLAGL1Q9UM63 463 aa16.02■□□□□ 0.16
RAB11FIP3-204ENST00000449879 G3BP2Q9UN86 482 aaKnown RBP16.02■□□□□ 0.16
RAB11FIP3-204ENST00000449879 ZNF451Q9Y4E5 1061 aa16.02■□□□□ 0.16
RAB11FIP3-204ENST00000449879 ICE1Q9Y2F5 2266 aa16.01■□□□□ 0.15
RAB11FIP3-204ENST00000449879 BHMG1C9JSJ3 638 aaPredicted RBP16.01■□□□□ 0.15
RAB11FIP3-204ENST00000449879 HCRTR1O43613 425 aa16.01■□□□□ 0.15
RAB11FIP3-204ENST00000449879 CEP104O60308 925 aa16.01■□□□□ 0.15
RAB11FIP3-204ENST00000449879 OR1I1O60431 355 aa16.01■□□□□ 0.15
RAB11FIP3-204ENST00000449879 CEACAM4O75871 244 aa16.01■□□□□ 0.15
RAB11FIP3-204ENST00000449879 GAS8O95995 478 aa16.01■□□□□ 0.15
RAB11FIP3-204ENST00000449879 FGGP02679 453 aa16.01■□□□□ 0.15
RAB11FIP3-204ENST00000449879 CHRM5P08912 532 aaPredicted RBP16.01■□□□□ 0.15
RAB11FIP3-204ENST00000449879 OR56A5P0C7T3 313 aa16.01■□□□□ 0.15
RAB11FIP3-204ENST00000449879 TPBGLP0DKB5 382 aa16.01■□□□□ 0.15
RAB11FIP3-204ENST00000449879 CBSLP0DN79 551 aa16.01■□□□□ 0.15
RAB11FIP3-204ENST00000449879 GP1BBP13224 206 aa16.01■□□□□ 0.15
RAB11FIP3-204ENST00000449879 GNLYP22749 145 aa16.01■□□□□ 0.15
RAB11FIP3-204ENST00000449879 PSMA3P25788 255 aa16.01■□□□□ 0.15
RAB11FIP3-204ENST00000449879 OTX2P32243 289 aa16.01■□□□□ 0.15
RAB11FIP3-204ENST00000449879 CXCR5P32302 372 aa16.01■□□□□ 0.15
RAB11FIP3-204ENST00000449879 CBSP35520 551 aa16.01■□□□□ 0.15
RAB11FIP3-204ENST00000449879 CSE1LP55060 971 aaKnown RBP16.01■□□□□ 0.15
RAB11FIP3-204ENST00000449879 CDH17Q12864 832 aa16.01■□□□□ 0.15
RAB11FIP3-204ENST00000449879 ATP1A4Q13733 1029 aa16.01■□□□□ 0.15
RAB11FIP3-204ENST00000449879 OASLQ15646 514 aaKnown RBP16.01■□□□□ 0.15
RAB11FIP3-204ENST00000449879 ZIC1Q15915 447 aa16.01■□□□□ 0.15
RAB11FIP3-204ENST00000449879 SYTL3Q4VX76 610 aa16.01■□□□□ 0.15
RAB11FIP3-204ENST00000449879 C1orf189Q5VU69 101 aa16.01■□□□□ 0.15
RAB11FIP3-204ENST00000449879 MED25Q71SY5 747 aa16.01■□□□□ 0.15
RAB11FIP3-204ENST00000449879 SLC35F6Q8N357 371 aa16.01■□□□□ 0.15
RAB11FIP3-204ENST00000449879 C1orf54Q8WWF1 131 aa16.01■□□□□ 0.15
RAB11FIP3-204ENST00000449879 HDAC10Q969S8 669 aa16.01■□□□□ 0.15
RAB11FIP3-204ENST00000449879 NUDT9Q9BW91 350 aa16.01■□□□□ 0.15
RAB11FIP3-204ENST00000449879 LRRC4CQ9HCJ2 640 aa16.01■□□□□ 0.15
RAB11FIP3-204ENST00000449879 LUZP4Q9P127 313 aa16.01■□□□□ 0.15
RAB11FIP3-204ENST00000449879 PADI2Q9Y2J8 665 aa16.01■□□□□ 0.15
RAB11FIP3-204ENST00000449879 ZKSCAN5Q9Y2L8 839 aa16.01■□□□□ 0.15
RAB11FIP3-204ENST00000449879 SLC5A10A0PJK1 596 aa16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms