RNA–Protein interactions for RNA: ENST00000449510.6

UBE3B-204, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 5

Gene UBE3B, Length 3,771 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-204ENST00000449510 UGT2A1Q9Y4X1 527 aa12.17□□□□□ -0.46
UBE3B-204ENST00000449510 GSAPA4D1B5 854 aa12.17□□□□□ -0.46
UBE3B-204ENST00000449510 TNFRSF11BO00300 401 aa12.17□□□□□ -0.46
UBE3B-204ENST00000449510 TSPAN4O14817 238 aa12.17□□□□□ -0.46
UBE3B-204ENST00000449510 WBP4O75554 376 aaKnown RBP12.17□□□□□ -0.46
UBE3B-204ENST00000449510 CAPN15O75808 1086 aa12.17□□□□□ -0.46
UBE3B-204ENST00000449510 FABP3P05413 133 aa12.17□□□□□ -0.46
UBE3B-204ENST00000449510 SBK3P0C264 359 aa12.17□□□□□ -0.46
UBE3B-204ENST00000449510 CD1DP15813 335 aa12.17□□□□□ -0.46
UBE3B-204ENST00000449510 DCKP27707 260 aa12.17□□□□□ -0.46
UBE3B-204ENST00000449510 KIR3DL1P43629 444 aa12.17□□□□□ -0.46
UBE3B-204ENST00000449510 PRKAG1P54619 331 aa12.17□□□□□ -0.46
UBE3B-204ENST00000449510 ZXDBP98169 803 aa12.17□□□□□ -0.46
UBE3B-204ENST00000449510 MFSD10Q14728 455 aa12.17□□□□□ -0.46
UBE3B-204ENST00000449510 NCF4Q15080 339 aa12.17□□□□□ -0.46
UBE3B-204ENST00000449510 TTLL9Q3SXZ7 439 aa12.17□□□□□ -0.46
UBE3B-204ENST00000449510 C1QTNF12Q5T7M4 302 aa12.17□□□□□ -0.46
UBE3B-204ENST00000449510 CASP12Q6UXS9 341 aa12.17□□□□□ -0.46
UBE3B-204ENST00000449510 GPR78Q96P69 363 aa12.17□□□□□ -0.46
UBE3B-204ENST00000449510 ADAM2Q99965 735 aa12.17□□□□□ -0.46
UBE3B-204ENST00000449510 TCF25Q9BQ70 676 aa12.17□□□□□ -0.46
UBE3B-204ENST00000449510 KLHL1Q9NR64 748 aa12.17□□□□□ -0.46
UBE3B-204ENST00000449510 STMN3Q9NZ72 180 aa12.17□□□□□ -0.46
UBE3B-204ENST00000449510 MYO7AQ13402 2215 aa12.16□□□□□ -0.46
UBE3B-204ENST00000449510 ITGB1P05556 798 aa12.16□□□□□ -0.46
UBE3B-204ENST00000449510 FHP07954 510 aa12.16□□□□□ -0.46
UBE3B-204ENST00000449510 STSP08842 583 aa12.16□□□□□ -0.46
UBE3B-204ENST00000449510 GPR15P49685 360 aa12.16□□□□□ -0.46
UBE3B-204ENST00000449510 DNAJB13P59910 316 aa12.16□□□□□ -0.46
UBE3B-204ENST00000449510 RPS24P62847 133 aaKnown RBP12.16□□□□□ -0.46
UBE3B-204ENST00000449510 YBX1P67809 324 aaKnown RBP12.16□□□□□ -0.46
UBE3B-204ENST00000449510 ELP6Q0PNE2 266 aa12.16□□□□□ -0.46
UBE3B-204ENST00000449510 SYTL3Q4VX76 610 aa12.16□□□□□ -0.46
UBE3B-204ENST00000449510 FAM171A1Q5VUB5 890 aa12.16□□□□□ -0.46
UBE3B-204ENST00000449510 MBOAT1Q6ZNC8 495 aa12.16□□□□□ -0.46
UBE3B-204ENST00000449510 TRIM69Q86WT6 500 aa12.16□□□□□ -0.46
UBE3B-204ENST00000449510 PIH1D2Q8WWB5 315 aa12.16□□□□□ -0.46
UBE3B-204ENST00000449510 SLC9A7Q96T83 725 aa12.16□□□□□ -0.46
UBE3B-204ENST00000449510 PHOX2BQ99453 314 aa12.16□□□□□ -0.46
UBE3B-204ENST00000449510 ACAT2Q9BWD1 397 aa12.16□□□□□ -0.46
UBE3B-204ENST00000449510 NMUR1Q9HB89 426 aa12.16□□□□□ -0.46
UBE3B-204ENST00000449510 CAPN10Q9HC96 672 aa12.16□□□□□ -0.46
UBE3B-204ENST00000449510 AASDHPPTQ9NRN7 309 aa12.16□□□□□ -0.46
UBE3B-204ENST00000449510 FARSBQ9NSD9 589 aaKnown RBP12.16□□□□□ -0.46
UBE3B-204ENST00000449510 RNF181Q9P0P0 153 aa12.16□□□□□ -0.46
UBE3B-204ENST00000449510 SNX6Q9UNH7 406 aa12.16□□□□□ -0.46
UBE3B-204ENST00000449510 CARD8Q9Y2G2 431 aa12.16□□□□□ -0.46
UBE3B-204ENST00000449510 CLCA3PQ9Y6N3 262 aa12.16□□□□□ -0.46
UBE3B-204ENST00000449510 A0A1B0GTL3 188 aa12.16□□□□□ -0.46
UBE3B-204ENST00000449510 SLC35F4A4IF30 521 aa12.16□□□□□ -0.46
UBE3B-204ENST00000449510 H0YJX3 145 aa12.16□□□□□ -0.46
UBE3B-204ENST00000449510 BTN3A3O00478 584 aa12.16□□□□□ -0.46
UBE3B-204ENST00000449510 FPGTO14772 594 aa12.16□□□□□ -0.46
UBE3B-204ENST00000449510 OR10H3O60404 316 aa12.16□□□□□ -0.46
UBE3B-204ENST00000449510 PSKH1P11801 424 aa12.16□□□□□ -0.46
UBE3B-204ENST00000449510 GADD45AP24522 165 aa12.16□□□□□ -0.46
UBE3B-204ENST00000449510 IFNA8P32881 189 aa12.16□□□□□ -0.46
UBE3B-204ENST00000449510 RFX3P48380 749 aa12.16□□□□□ -0.46
UBE3B-204ENST00000449510 TTPAP49638 278 aa12.16□□□□□ -0.46
UBE3B-204ENST00000449510 CCL23P55773 120 aa12.16□□□□□ -0.46
UBE3B-204ENST00000449510 TSTQ16762 297 aaKnown RBP12.16□□□□□ -0.46
UBE3B-204ENST00000449510 PPP2R2DQ66LE6 453 aa12.16□□□□□ -0.46
UBE3B-204ENST00000449510 ERAP2Q6P179 960 aa12.16□□□□□ -0.46
UBE3B-204ENST00000449510 RTL3Q8N8U3 475 aaKnown RBP12.16□□□□□ -0.46
UBE3B-204ENST00000449510 MFSD2AQ8NA29 543 aa12.16□□□□□ -0.46
UBE3B-204ENST00000449510 CHDHQ8NE62 594 aaPredicted RBP12.16□□□□□ -0.46
UBE3B-204ENST00000449510 FAM83FQ8NEG4 500 aaPredicted RBP12.16□□□□□ -0.46
UBE3B-204ENST00000449510 CDK5RAP1Q96SZ6 601 aaKnown RBP12.16□□□□□ -0.46
UBE3B-204ENST00000449510 C1QTNF1Q9BXJ1 281 aa12.16□□□□□ -0.46
UBE3B-204ENST00000449510 C1orf109Q9NX04 203 aa12.16□□□□□ -0.46
UBE3B-204ENST00000449510 MAP4K5Q9Y4K4 846 aa12.16□□□□□ -0.46
UBE3B-204ENST00000449510 TNPO3Q9Y5L0 923 aaKnown RBP12.16□□□□□ -0.46
UBE3B-204ENST00000449510 GUCY1B2O75343 617 aa12.16□□□□□ -0.46
UBE3B-204ENST00000449510 RPLP0P05388 317 aaKnown RBP12.16□□□□□ -0.46
UBE3B-204ENST00000449510 HSD17B1P14061 328 aa12.16□□□□□ -0.46
UBE3B-204ENST00000449510 EPORP19235 508 aa12.16□□□□□ -0.46
UBE3B-204ENST00000449510 TYMPP19971 482 aa12.16□□□□□ -0.46
UBE3B-204ENST00000449510 SLC11A2P49281 568 aa12.16□□□□□ -0.46
UBE3B-204ENST00000449510 MAD2L1Q13257 205 aaPredicted RBP12.16□□□□□ -0.46
UBE3B-204ENST00000449510 NFE2L1Q14494 772 aa12.16□□□□□ -0.46
UBE3B-204ENST00000449510 ABRAXAS2Q15018 415 aa12.16□□□□□ -0.46
UBE3B-204ENST00000449510 INAVAQ3KP66 663 aa12.16□□□□□ -0.46
UBE3B-204ENST00000449510 USP39Q53GS9 565 aaKnown RBP12.16□□□□□ -0.46
UBE3B-204ENST00000449510 RUNDC3AQ59EK9 446 aa12.16□□□□□ -0.46
UBE3B-204ENST00000449510 TLK2Q86UE8 772 aa12.16□□□□□ -0.46
UBE3B-204ENST00000449510 TRIM45Q9H8W5 580 aaPredicted RBP12.16□□□□□ -0.46
UBE3B-204ENST00000449510 WDR6Q9NNW5 1121 aaKnown RBP12.16□□□□□ -0.46
UBE3B-204ENST00000449510 HSPB11Q9Y547 144 aa12.16□□□□□ -0.46
UBE3B-204ENST00000449510 HS3ST4Q9Y661 456 aa12.16□□□□□ -0.46
UBE3B-204ENST00000449510 DDX60LQ5H9U9 1706 aaKnown RBP12.16□□□□□ -0.46
UBE3B-204ENST00000449510 SOX14O95416 240 aa12.15□□□□□ -0.46
UBE3B-204ENST00000449510 FGF1P05230 155 aa12.15□□□□□ -0.46
UBE3B-204ENST00000449510 PFKLP17858 780 aa12.15□□□□□ -0.46
UBE3B-204ENST00000449510 GSTM2P28161 218 aa12.15□□□□□ -0.46
UBE3B-204ENST00000449510 ABATP80404 500 aa12.15□□□□□ -0.46
UBE3B-204ENST00000449510 TAF10Q12962 218 aa12.15□□□□□ -0.46
UBE3B-204ENST00000449510 ABRQ12979 859 aa12.15□□□□□ -0.46
UBE3B-204ENST00000449510 OR2T5Q6IEZ7 315 aa12.15□□□□□ -0.46
UBE3B-204ENST00000449510 ZNF517Q6ZMY9 492 aaPredicted RBP12.15□□□□□ -0.46
UBE3B-204ENST00000449510 C16orf62Q7Z3J2 963 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms