RNA–Protein interactions for RNA: ENST00000446876.1

HDAC4-204, Transcript of histone deacetylase 4, humanhuman

TSL 4

Gene HDAC4, Length 554 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-204ENST00000446876 E5RI56 91 aa14.38□□□□□ -0.11
HDAC4-204ENST00000446876 H3BMM5 538 aa14.38□□□□□ -0.11
HDAC4-204ENST00000446876 SMAPO00193 183 aa14.38□□□□□ -0.11
HDAC4-204ENST00000446876 POLR1CO15160 346 aaPredicted RBP14.38□□□□□ -0.11
HDAC4-204ENST00000446876 TTC4O95801 387 aa14.38□□□□□ -0.11
HDAC4-204ENST00000446876 EBLN1P0CF75 366 aa14.38□□□□□ -0.11
HDAC4-204ENST00000446876 LIPCP11150 499 aa14.38□□□□□ -0.11
HDAC4-204ENST00000446876 PVRP15151 417 aa14.38□□□□□ -0.11
HDAC4-204ENST00000446876 FOLR1P15328 257 aa14.38□□□□□ -0.11
HDAC4-204ENST00000446876 CDH3P22223 829 aa14.38□□□□□ -0.11
HDAC4-204ENST00000446876 CARSP49589 748 aaKnown RBP14.38□□□□□ -0.11
HDAC4-204ENST00000446876 CUL1Q13616 776 aa14.38□□□□□ -0.11
HDAC4-204ENST00000446876 GRB7Q14451 532 aa14.38□□□□□ -0.11
HDAC4-204ENST00000446876 CCSMST1Q4G0I0 132 aa14.38□□□□□ -0.11
HDAC4-204ENST00000446876 ACSBG2Q5FVE4 666 aa14.38□□□□□ -0.11
HDAC4-204ENST00000446876 PLEKHS1Q5SXH7 462 aa14.38□□□□□ -0.11
HDAC4-204ENST00000446876 MAATS1Q7Z4T9 603 aa14.38□□□□□ -0.11
HDAC4-204ENST00000446876 TRIM73Q86UV7 250 aa14.38□□□□□ -0.11
HDAC4-204ENST00000446876 ZBTB2Q8N680 514 aa14.38□□□□□ -0.11
HDAC4-204ENST00000446876 SIDT2Q8NBJ9 832 aaKnown RBP14.38□□□□□ -0.11
HDAC4-204ENST00000446876 FBXO36Q8NEA4 188 aa14.38□□□□□ -0.11
HDAC4-204ENST00000446876 GSDMBQ8TAX9 411 aa14.38□□□□□ -0.11
HDAC4-204ENST00000446876 CERS2Q96G23 380 aa14.38□□□□□ -0.11
HDAC4-204ENST00000446876 SLC41A2Q96JW4 573 aa14.38□□□□□ -0.11
HDAC4-204ENST00000446876 IL17FQ96PD4 163 aa14.38□□□□□ -0.11
HDAC4-204ENST00000446876 CD180Q99467 661 aa14.38□□□□□ -0.11
HDAC4-204ENST00000446876 NDNQ99608 321 aa14.38□□□□□ -0.11
HDAC4-204ENST00000446876 NAT9Q9BTE0 207 aa14.38□□□□□ -0.11
HDAC4-204ENST00000446876 DPH1Q9BZG8 443 aa14.38□□□□□ -0.11
HDAC4-204ENST00000446876 SPHK1Q9NYA1 384 aa14.38□□□□□ -0.11
HDAC4-204ENST00000446876 ACTR10Q9NZ32 417 aa14.38□□□□□ -0.11
HDAC4-204ENST00000446876 POLG2Q9UHN1 485 aa14.38□□□□□ -0.11
HDAC4-204ENST00000446876 VPS9D1Q9Y2B5 631 aa14.38□□□□□ -0.11
HDAC4-204ENST00000446876 TEX51A0A1B0GUA7 166 aa14.37□□□□□ -0.11
HDAC4-204ENST00000446876 SLC9B1P1A6NJY1 282 aa14.37□□□□□ -0.11
HDAC4-204ENST00000446876 KPNA5O15131 536 aa14.37□□□□□ -0.11
HDAC4-204ENST00000446876 CHRM5P08912 532 aaPredicted RBP14.37□□□□□ -0.11
HDAC4-204ENST00000446876 ZNF28P17035 718 aa14.37□□□□□ -0.11
HDAC4-204ENST00000446876 GABRB3P28472 473 aa14.37□□□□□ -0.11
HDAC4-204ENST00000446876 PRDX3P30048 256 aaKnown RBP14.37□□□□□ -0.11
HDAC4-204ENST00000446876 PEBP1P30086 187 aaKnown RBP14.37□□□□□ -0.11
HDAC4-204ENST00000446876 PKLRP30613 574 aa14.37□□□□□ -0.11
HDAC4-204ENST00000446876 SHMT2P34897 504 aa14.37□□□□□ -0.11
HDAC4-204ENST00000446876 ARL4DP49703 201 aa14.37□□□□□ -0.11
HDAC4-204ENST00000446876 CLCN7P51798 805 aa14.37□□□□□ -0.11
HDAC4-204ENST00000446876 CXADRP78310 365 aa14.37□□□□□ -0.11
HDAC4-204ENST00000446876 CKAP4Q07065 602 aaKnown RBP14.37□□□□□ -0.11
HDAC4-204ENST00000446876 GBX1Q14549 363 aa14.37□□□□□ -0.11
HDAC4-204ENST00000446876 TRADDQ15628 312 aa14.37□□□□□ -0.11
HDAC4-204ENST00000446876 BROXQ5VW32 411 aa14.37□□□□□ -0.11
HDAC4-204ENST00000446876 STEAP4Q687X5 459 aa14.37□□□□□ -0.11
HDAC4-204ENST00000446876 DUPD1Q68J44 220 aa14.37□□□□□ -0.11
HDAC4-204ENST00000446876 UNC5DQ6UXZ4 953 aa14.37□□□□□ -0.11
HDAC4-204ENST00000446876 CEACAM20Q6UY09 585 aa14.37□□□□□ -0.11
HDAC4-204ENST00000446876 CAPN12Q6ZSI9 719 aa14.37□□□□□ -0.11
HDAC4-204ENST00000446876 TAX1BP1Q86VP1 789 aa14.37□□□□□ -0.11
HDAC4-204ENST00000446876 DTX1Q86Y01 620 aa14.37□□□□□ -0.11
HDAC4-204ENST00000446876 DCUN1D3Q8IWE4 304 aa14.37□□□□□ -0.11
HDAC4-204ENST00000446876 LMNTD2Q8IXW0 634 aa14.37□□□□□ -0.11
HDAC4-204ENST00000446876 C2orf73Q8N5S3 287 aaPredicted RBP14.37□□□□□ -0.11
HDAC4-204ENST00000446876 C2CD4AQ8NCU7 369 aaPredicted RBP14.37□□□□□ -0.11
HDAC4-204ENST00000446876 MENTQ9BUN1 341 aa14.37□□□□□ -0.11
HDAC4-204ENST00000446876 ASPSCR1Q9BZE9 553 aa14.37□□□□□ -0.11
HDAC4-204ENST00000446876 B3GNT4Q9C0J1 378 aa14.37□□□□□ -0.11
HDAC4-204ENST00000446876 CCDC68Q9H2F9 335 aa14.37□□□□□ -0.11
HDAC4-204ENST00000446876 PPANQ9NQ55 473 aaKnown RBP14.37□□□□□ -0.11
HDAC4-204ENST00000446876 SOHLH2Q9NX45 425 aa14.37□□□□□ -0.11
HDAC4-204ENST00000446876 WHRNQ9P202 907 aa14.37□□□□□ -0.11
HDAC4-204ENST00000446876 PIPSLA2A3N6 862 aa14.36□□□□□ -0.11
HDAC4-204ENST00000446876 C2orf74A8MZ97 194 aa14.36□□□□□ -0.11
HDAC4-204ENST00000446876 E7ESA3 106 aa14.36□□□□□ -0.11
HDAC4-204ENST00000446876 STMND1H3BQB6 276 aa14.36□□□□□ -0.11
HDAC4-204ENST00000446876 TIAF1O95411 115 aa14.36□□□□□ -0.11
HDAC4-204ENST00000446876 ST6GAL1P15907 406 aa14.36□□□□□ -0.11
HDAC4-204ENST00000446876 UGT2B7P16662 529 aa14.36□□□□□ -0.11
HDAC4-204ENST00000446876 CD82P27701 267 aa14.36□□□□□ -0.11
HDAC4-204ENST00000446876 HSD11B2P80365 405 aa14.36□□□□□ -0.11
HDAC4-204ENST00000446876 SLC7A5Q01650 507 aa14.36□□□□□ -0.11
HDAC4-204ENST00000446876 CALCOCO2Q13137 446 aa14.36□□□□□ -0.11
HDAC4-204ENST00000446876 TUBB3Q13509 450 aa14.36□□□□□ -0.11
HDAC4-204ENST00000446876 GPR19Q15760 415 aa14.36□□□□□ -0.11
HDAC4-204ENST00000446876 KYNUQ16719 465 aa14.36□□□□□ -0.11
HDAC4-204ENST00000446876 RBM20Q5T481 1227 aaKnown RBP14.36□□□□□ -0.11
HDAC4-204ENST00000446876 CNTN4Q8IWV2 1026 aa14.36□□□□□ -0.11
HDAC4-204ENST00000446876 FAM20CQ8IXL6 584 aa14.36□□□□□ -0.11
HDAC4-204ENST00000446876 ZBED8Q8IZ13 594 aa14.36□□□□□ -0.11
HDAC4-204ENST00000446876 LINC01555Q8NAE3 123 aa14.36□□□□□ -0.11
HDAC4-204ENST00000446876 BBOF1Q8ND07 529 aa14.36□□□□□ -0.11
HDAC4-204ENST00000446876 FLVCR1-AS1Q8TAF5 88 aa14.36□□□□□ -0.11
HDAC4-204ENST00000446876 LRRC39Q96DD0 335 aa14.36□□□□□ -0.11
HDAC4-204ENST00000446876 TRIM44Q96DX7 344 aaPredicted RBP14.36□□□□□ -0.11
HDAC4-204ENST00000446876 TEFMQ96QE5 360 aaKnown RBP14.36□□□□□ -0.11
HDAC4-204ENST00000446876 GPR21Q99679 349 aa14.36□□□□□ -0.11
HDAC4-204ENST00000446876 AARSD1Q9BTE6 412 aaKnown RBP14.36□□□□□ -0.11
HDAC4-204ENST00000446876 PCDHB11Q9Y5F2 797 aa14.36□□□□□ -0.11
HDAC4-204ENST00000446876 CFAP47Q6ZTR5 3102 aa14.36□□□□□ -0.11
HDAC4-204ENST00000446876 SPTBP11277 2137 aa14.35□□□□□ -0.11
HDAC4-204ENST00000446876 ESYT3A0FGR9 886 aa14.35□□□□□ -0.11
HDAC4-204ENST00000446876 IQCJ-SCHIP1C9J366 451 aaPredicted RBP14.35□□□□□ -0.11
HDAC4-204ENST00000446876 MATN2O00339 956 aa14.35□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms