RNA–Protein interactions for RNA: ENST00000444532.2

CCDC188-202, Transcript of coiled-coil domain containing 188, humanhuman

TSL 3

Gene CCDC188, Length 628 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC188-202ENST00000444532 IL1RAPL1Q9NZN1 696 aa18.06■□□□□ 0.48
CCDC188-202ENST00000444532 RARRES3Q9UL19 164 aa18.06■□□□□ 0.48
CCDC188-202ENST00000444532 BTRCQ9Y297 605 aa18.06■□□□□ 0.48
CCDC188-202ENST00000444532 PIPSLA2A3N6 862 aa18.05■□□□□ 0.48
CCDC188-202ENST00000444532 SLC9B1P1A6NJY1 282 aa18.05■□□□□ 0.48
CCDC188-202ENST00000444532 SPAG6O75602 509 aa18.05■□□□□ 0.48
CCDC188-202ENST00000444532 TTC4O95801 387 aa18.05■□□□□ 0.48
CCDC188-202ENST00000444532 EBLN1P0CF75 366 aa18.05■□□□□ 0.48
CCDC188-202ENST00000444532 TPBGLP0DKB5 382 aa18.05■□□□□ 0.48
CCDC188-202ENST00000444532 PGAM1P18669 254 aa18.05■□□□□ 0.48
CCDC188-202ENST00000444532 CASQ1P31415 396 aa18.05■□□□□ 0.48
CCDC188-202ENST00000444532 ETF1P62495 437 aaKnown RBP18.05■□□□□ 0.48
CCDC188-202ENST00000444532 TUBB4BP68371 445 aa18.05■□□□□ 0.48
CCDC188-202ENST00000444532 ABHD18Q0P651 414 aa18.05■□□□□ 0.48
CCDC188-202ENST00000444532 TUBB2AQ13885 445 aa18.05■□□□□ 0.48
CCDC188-202ENST00000444532 KYNUQ16719 465 aa18.05■□□□□ 0.48
CCDC188-202ENST00000444532 ESX1Q8N693 406 aa18.05■□□□□ 0.48
CCDC188-202ENST00000444532 SERBP1Q8NC51 408 aaKnown RBP eCLIP18.05■□□□□ 0.48
CCDC188-202ENST00000444532 LSM14AQ8ND56 463 aaKnown RBP18.05■□□□□ 0.48
CCDC188-202ENST00000444532 OR8K5Q8NH50 307 aa18.05■□□□□ 0.48
CCDC188-202ENST00000444532 ELMO2Q96JJ3 720 aa18.05■□□□□ 0.48
CCDC188-202ENST00000444532 PPM1MQ96MI6 270 aa18.05■□□□□ 0.48
CCDC188-202ENST00000444532 EBNA1BP2Q99848 306 aaKnown RBP18.05■□□□□ 0.48
CCDC188-202ENST00000444532 TUBB2BQ9BVA1 445 aa18.05■□□□□ 0.48
CCDC188-202ENST00000444532 PITPNM3Q9BZ71 974 aa18.05■□□□□ 0.48
CCDC188-202ENST00000444532 SYTL2Q9HCH5 934 aa18.05■□□□□ 0.48
CCDC188-202ENST00000444532 C20orf96Q9NUD7 363 aaPredicted RBP18.05■□□□□ 0.48
CCDC188-202ENST00000444532 MRFAP1Q9Y605 127 aa18.05■□□□□ 0.48
CCDC188-202ENST00000444532 ERVH48-1M5A8F1 160 aa18.04■□□□□ 0.48
CCDC188-202ENST00000444532 TTI1O43156 1089 aa18.04■□□□□ 0.48
CCDC188-202ENST00000444532 MSL3P1P0C860 447 aa18.04■□□□□ 0.48
CCDC188-202ENST00000444532 PKMP14618 531 aaKnown RBP18.04■□□□□ 0.48
CCDC188-202ENST00000444532 CHRM3P20309 590 aa18.04■□□□□ 0.48
CCDC188-202ENST00000444532 ATP5DP30049 168 aa18.04■□□□□ 0.48
CCDC188-202ENST00000444532 DHX9Q08211 1270 aaKnown RBP18.04■□□□□ 0.48
CCDC188-202ENST00000444532 CTBP1Q13363 440 aa18.04■□□□□ 0.48
CCDC188-202ENST00000444532 TTC23LQ6PF05 361 aa18.04■□□□□ 0.48
CCDC188-202ENST00000444532 SPESP1Q6UW49 350 aa18.04■□□□□ 0.48
CCDC188-202ENST00000444532 C6orf15Q6UXA7 325 aaPredicted RBP18.04■□□□□ 0.48
CCDC188-202ENST00000444532 DCUN1D3Q8IWE4 304 aa18.04■□□□□ 0.48
CCDC188-202ENST00000444532 PDIK1LQ8N165 341 aa18.04■□□□□ 0.48
CCDC188-202ENST00000444532 CFAP61Q8NHU2 1237 aa18.04■□□□□ 0.48
CCDC188-202ENST00000444532 GABPB2Q8TAK5 448 aaPredicted RBP18.04■□□□□ 0.48
CCDC188-202ENST00000444532 KIAA1143Q96AT1 154 aaPredicted RBP18.04■□□□□ 0.48
CCDC188-202ENST00000444532 FAM167BQ9BTA0 163 aa18.04■□□□□ 0.48
CCDC188-202ENST00000444532 EFHD1Q9BUP0 239 aa18.04■□□□□ 0.48
CCDC188-202ENST00000444532 TWSG1Q9GZX9 223 aa18.04■□□□□ 0.48
CCDC188-202ENST00000444532 SOHLH2Q9NX45 425 aa18.04■□□□□ 0.48
CCDC188-202ENST00000444532 PCDHGA4Q9Y5G9 962 aa18.04■□□□□ 0.48
CCDC188-202ENST00000444532 MGAQ8IWI9 3026 aa18.04■□□□□ 0.48
CCDC188-202ENST00000444532 E5RI56 91 aa18.03■□□□□ 0.48
CCDC188-202ENST00000444532 ATXN7O15265 892 aaPredicted RBP18.03■□□□□ 0.48
CCDC188-202ENST00000444532 NIPSNAP2O75323 286 aa18.03■□□□□ 0.48
CCDC188-202ENST00000444532 KIAA0754O94854 1291 aa18.03■□□□□ 0.48
CCDC188-202ENST00000444532 MT-ND3P03897 115 aa18.03■□□□□ 0.48
CCDC188-202ENST00000444532 CHRM5P08912 532 aaPredicted RBP18.03■□□□□ 0.48
CCDC188-202ENST00000444532 LIFP15018 202 aa18.03■□□□□ 0.48
CCDC188-202ENST00000444532 ZNF28P17035 718 aa18.03■□□□□ 0.48
CCDC188-202ENST00000444532 RAB28P51157 221 aa18.03■□□□□ 0.48
CCDC188-202ENST00000444532 GBX1Q14549 363 aa18.03■□□□□ 0.48
CCDC188-202ENST00000444532 CRYMQ14894 314 aa18.03■□□□□ 0.48
CCDC188-202ENST00000444532 KIR2DS3Q14952 304 aa18.03■□□□□ 0.48
CCDC188-202ENST00000444532 MSS51Q4VC12 460 aa18.03■□□□□ 0.48
CCDC188-202ENST00000444532 SOWAHCQ53LP3 525 aaPredicted RBP18.03■□□□□ 0.48
CCDC188-202ENST00000444532 ZNF789Q5FWF6 425 aa18.03■□□□□ 0.48
CCDC188-202ENST00000444532 SPANXN3Q5MJ09 141 aa18.03■□□□□ 0.48
CCDC188-202ENST00000444532 HIBCHQ6NVY1 386 aaPredicted RBP18.03■□□□□ 0.48
CCDC188-202ENST00000444532 FBXO38Q6PIJ6 1188 aa18.03■□□□□ 0.48
CCDC188-202ENST00000444532 DENND6AQ8IWF6 608 aa18.03■□□□□ 0.48
CCDC188-202ENST00000444532 C17orf53Q8N3J3 647 aaPredicted RBP18.03■□□□□ 0.48
CCDC188-202ENST00000444532 ZNF501Q96CX3 271 aaPredicted RBP18.03■□□□□ 0.48
CCDC188-202ENST00000444532 WBP1Q96G27 269 aa18.03■□□□□ 0.48
CCDC188-202ENST00000444532 SNF8Q96H20 258 aa18.03■□□□□ 0.48
CCDC188-202ENST00000444532 FOPNLQ96NB1 174 aa18.03■□□□□ 0.48
CCDC188-202ENST00000444532 TRAPPC9Q96Q05 1148 aa18.03■□□□□ 0.48
CCDC188-202ENST00000444532 OR2A14Q96R47 310 aa18.03■□□□□ 0.48
CCDC188-202ENST00000444532 KRT12Q99456 494 aa18.03■□□□□ 0.48
CCDC188-202ENST00000444532 TRIM51Q9BSJ1 452 aa18.03■□□□□ 0.48
CCDC188-202ENST00000444532 CCDC68Q9H2F9 335 aa18.03■□□□□ 0.48
CCDC188-202ENST00000444532 FANCEQ9HB96 536 aa18.03■□□□□ 0.48
CCDC188-202ENST00000444532 KLHL42Q9P2K6 505 aa18.03■□□□□ 0.48
CCDC188-202ENST00000444532 FBXO5Q9UKT4 447 aa18.03■□□□□ 0.48
CCDC188-202ENST00000444532 COMMD10Q9Y6G5 202 aa18.03■□□□□ 0.48
CCDC188-202ENST00000444532 TK2O00142 265 aa18.02■□□□□ 0.48
CCDC188-202ENST00000444532 NDC80O14777 642 aa18.02■□□□□ 0.48
CCDC188-202ENST00000444532 CCNYL3P0C7X3 344 aa18.02■□□□□ 0.48
CCDC188-202ENST00000444532 ST6GAL1P15907 406 aa18.02■□□□□ 0.48
CCDC188-202ENST00000444532 UGT2B7P16662 529 aa18.02■□□□□ 0.48
CCDC188-202ENST00000444532 WT1P19544 449 aaPredicted RBP18.02■□□□□ 0.48
CCDC188-202ENST00000444532 PKLRP30613 574 aa18.02■□□□□ 0.48
CCDC188-202ENST00000444532 CCNFP41002 786 aa18.02■□□□□ 0.48
CCDC188-202ENST00000444532 STAT5AP42229 794 aa18.02■□□□□ 0.48
CCDC188-202ENST00000444532 SLC1A2P43004 574 aa18.02■□□□□ 0.48
CCDC188-202ENST00000444532 GPR19Q15760 415 aa18.02■□□□□ 0.48
CCDC188-202ENST00000444532 BBS9Q3SYG4 887 aa18.02■□□□□ 0.48
CCDC188-202ENST00000444532 HSP90AA5PQ58FG0 334 aa18.02■□□□□ 0.48
CCDC188-202ENST00000444532 PWWP2BQ6NUJ5 590 aa18.02■□□□□ 0.48
CCDC188-202ENST00000444532 KCNMB4Q86W47 210 aa18.02■□□□□ 0.48
CCDC188-202ENST00000444532 ZBTB2Q8N680 514 aa18.02■□□□□ 0.48
CCDC188-202ENST00000444532 GALNT6Q8NCL4 622 aa18.02■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms