RNA–Protein interactions for RNA: ENST00000444061.7

SMARCA4-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SMARCA4, Length 4,938 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-204ENST00000444061 VAC14Q08AM6 782 aa13.8□□□□□ -0.2
SMARCA4-204ENST00000444061 ADRM1Q16186 407 aa13.8□□□□□ -0.2
SMARCA4-204ENST00000444061 CLEC6AQ6EIG7 209 aa13.8□□□□□ -0.2
SMARCA4-204ENST00000444061 RBM18Q96H35 190 aaKnown RBP13.8□□□□□ -0.2
SMARCA4-204ENST00000444061 DHRS7Q9Y394 339 aa13.8□□□□□ -0.2
SMARCA4-204ENST00000444061 SNX5Q9Y5X3 404 aa13.8□□□□□ -0.2
SMARCA4-204ENST00000444061 ATAD5Q96QE3 1844 aa13.8□□□□□ -0.2
SMARCA4-204ENST00000444061 RFXANKO14593 260 aa13.8□□□□□ -0.2
SMARCA4-204ENST00000444061 PRKCHP24723 683 aa13.8□□□□□ -0.2
SMARCA4-204ENST00000444061 SEPHS1P49903 392 aa13.8□□□□□ -0.2
SMARCA4-204ENST00000444061 LRRC70Q7Z2Q7 622 aa13.8□□□□□ -0.2
SMARCA4-204ENST00000444061 PROX1Q92786 737 aa13.8□□□□□ -0.2
SMARCA4-204ENST00000444061 RTP4Q96DX8 246 aa13.8□□□□□ -0.2
SMARCA4-204ENST00000444061 ZNF358Q9NW07 568 aa13.8□□□□□ -0.2
SMARCA4-204ENST00000444061 SLC22A14Q9Y267 594 aa13.8□□□□□ -0.2
SMARCA4-204ENST00000444061 JMJD7P0C870 316 aa13.8□□□□□ -0.2
SMARCA4-204ENST00000444061 NR2F1P10589 423 aa13.8□□□□□ -0.2
SMARCA4-204ENST00000444061 NT5EP21589 574 aa13.8□□□□□ -0.2
SMARCA4-204ENST00000444061 SLC26A3P40879 764 aa13.8□□□□□ -0.2
SMARCA4-204ENST00000444061 COPZ1P61923 177 aa13.8□□□□□ -0.2
SMARCA4-204ENST00000444061 TRIP10Q15642 601 aa13.8□□□□□ -0.2
SMARCA4-204ENST00000444061 FAAH2Q6GMR7 532 aa13.8□□□□□ -0.2
SMARCA4-204ENST00000444061 PSAPL1Q6NUJ1 521 aa13.8□□□□□ -0.2
SMARCA4-204ENST00000444061 SPATA19Q7Z5L4 167 aa13.8□□□□□ -0.2
SMARCA4-204ENST00000444061 STRADBQ9C0K7 418 aa13.8□□□□□ -0.2
SMARCA4-204ENST00000444061 CCDC90BQ9GZT6 254 aa13.8□□□□□ -0.2
SMARCA4-204ENST00000444061 PREBQ9HCU5 417 aa13.8□□□□□ -0.2
SMARCA4-204ENST00000444061 DDX18Q9NVP1 670 aaKnown RBP13.8□□□□□ -0.2
SMARCA4-204ENST00000444061 SLC22A3O75751 556 aa13.8□□□□□ -0.2
SMARCA4-204ENST00000444061 POLR2CP19387 275 aaPredicted RBP13.8□□□□□ -0.2
SMARCA4-204ENST00000444061 HSPA13P48723 471 aa13.8□□□□□ -0.2
SMARCA4-204ENST00000444061 SAMD4BQ5PRF9 694 aaKnown RBP13.8□□□□□ -0.2
SMARCA4-204ENST00000444061 DPPA4Q7L190 304 aa13.8□□□□□ -0.2
SMARCA4-204ENST00000444061 CDK20Q8IZL9 346 aa13.8□□□□□ -0.2
SMARCA4-204ENST00000444061 ACTRT2Q8TDY3 377 aa13.8□□□□□ -0.2
SMARCA4-204ENST00000444061 MTERF1Q99551 399 aaKnown RBP13.8□□□□□ -0.2
SMARCA4-204ENST00000444061 DERL2Q9GZP9 239 aa13.8□□□□□ -0.2
SMARCA4-204ENST00000444061 CCDC134Q9H6E4 229 aa13.8□□□□□ -0.2
SMARCA4-204ENST00000444061 EXO5Q9H790 373 aa13.8□□□□□ -0.2
SMARCA4-204ENST00000444061 KLK3P07288 261 aaPredicted RBP13.79□□□□□ -0.2
SMARCA4-204ENST00000444061 PTPN4P29074 926 aa13.79□□□□□ -0.2
SMARCA4-204ENST00000444061 DPP6P42658 865 aa13.79□□□□□ -0.2
SMARCA4-204ENST00000444061 ADAM15Q13444 863 aa13.79□□□□□ -0.2
SMARCA4-204ENST00000444061 ZC3H12BQ5HYM0 836 aaKnown RBP13.79□□□□□ -0.2
SMARCA4-204ENST00000444061 BANPQ8N9N5 519 aa13.79□□□□□ -0.2
SMARCA4-204ENST00000444061 DCAKDQ8WVC6 231 aa13.79□□□□□ -0.2
SMARCA4-204ENST00000444061 NDC1Q9BTX1 674 aa13.79□□□□□ -0.2
SMARCA4-204ENST00000444061 KLHL25Q9H0H3 589 aa13.79□□□□□ -0.2
SMARCA4-204ENST00000444061 TMEM30AQ9NV96 361 aa13.79□□□□□ -0.2
SMARCA4-204ENST00000444061 THAP10Q9P2Z0 257 aaPredicted RBP13.79□□□□□ -0.2
SMARCA4-204ENST00000444061 COLQQ9Y215 455 aaPredicted RBP13.79□□□□□ -0.2
SMARCA4-204ENST00000444061 EDF1O60869 148 aaKnown RBP13.79□□□□□ -0.2
SMARCA4-204ENST00000444061 SDC3O75056 442 aa13.79□□□□□ -0.2
SMARCA4-204ENST00000444061 ZDHHC11BP0C7U3 371 aa13.79□□□□□ -0.2
SMARCA4-204ENST00000444061 IGDCC3Q8IVU1 814 aa13.79□□□□□ -0.2
SMARCA4-204ENST00000444061 UBALD2Q8IYN6 164 aa13.79□□□□□ -0.2
SMARCA4-204ENST00000444061 RIN3Q8TB24 985 aa13.79□□□□□ -0.2
SMARCA4-204ENST00000444061 EXOSC8Q96B26 276 aaKnown RBP13.79□□□□□ -0.2
SMARCA4-204ENST00000444061 ZDHHC12Q96GR4 267 aa13.79□□□□□ -0.2
SMARCA4-204ENST00000444061 ITCHQ96J02 903 aa13.79□□□□□ -0.2
SMARCA4-204ENST00000444061 WDR55Q9H6Y2 383 aaPredicted RBP13.79□□□□□ -0.2
SMARCA4-204ENST00000444061 TMEM150CB9EJG8 249 aa13.79□□□□□ -0.2
SMARCA4-204ENST00000444061 SNX3O60493 162 aa13.79□□□□□ -0.2
SMARCA4-204ENST00000444061 NPHS1O60500 1241 aa13.79□□□□□ -0.2
SMARCA4-204ENST00000444061 TIMP2P16035 220 aa13.79□□□□□ -0.2
SMARCA4-204ENST00000444061 GUCA1AP43080 201 aaPredicted RBP13.79□□□□□ -0.2
SMARCA4-204ENST00000444061 KIR3DL1P43629 444 aa13.79□□□□□ -0.2
SMARCA4-204ENST00000444061 ARCN1P48444 511 aaKnown RBP13.79□□□□□ -0.2
SMARCA4-204ENST00000444061 CENPAP49450 140 aa13.79□□□□□ -0.2
SMARCA4-204ENST00000444061 CCT8P50990 548 aa13.79□□□□□ -0.2
SMARCA4-204ENST00000444061 ARSDP51689 593 aa13.79□□□□□ -0.2
SMARCA4-204ENST00000444061 LRRC36Q1X8D7 754 aa13.79□□□□□ -0.2
SMARCA4-204ENST00000444061 PTCHD3Q3KNS1 767 aa13.79□□□□□ -0.2
SMARCA4-204ENST00000444061 GPAT3Q53EU6 434 aa13.79□□□□□ -0.2
SMARCA4-204ENST00000444061 IL21Q9HBE4 155 aa13.79□□□□□ -0.2
SMARCA4-204ENST00000444061 PRSS16Q9NQE7 514 aa13.79□□□□□ -0.2
SMARCA4-204ENST00000444061 SPO11Q9Y5K1 396 aa13.79□□□□□ -0.2
SMARCA4-204ENST00000444061 GSTM1P09488 218 aa13.79□□□□□ -0.2
SMARCA4-204ENST00000444061 OCM2P0CE71 109 aa13.79□□□□□ -0.2
SMARCA4-204ENST00000444061 OCMP0CE72 109 aaPredicted RBP13.79□□□□□ -0.2
SMARCA4-204ENST00000444061 CPN2P22792 545 aa13.79□□□□□ -0.2
SMARCA4-204ENST00000444061 SGSHP51688 502 aa13.79□□□□□ -0.2
SMARCA4-204ENST00000444061 HEPACAMQ14CZ8 416 aa13.79□□□□□ -0.2
SMARCA4-204ENST00000444061 IL23RQ5VWK5 629 aa13.79□□□□□ -0.2
SMARCA4-204ENST00000444061 LIPIQ6XZB0 460 aa13.79□□□□□ -0.2
SMARCA4-204ENST00000444061 Q6ZSR6 202 aa13.79□□□□□ -0.2
SMARCA4-204ENST00000444061 TMEM135Q86UB9 458 aa13.79□□□□□ -0.2
SMARCA4-204ENST00000444061 WDR48Q8TAF3 677 aa13.79□□□□□ -0.2
SMARCA4-204ENST00000444061 TPD52L3Q96J77 140 aa13.79□□□□□ -0.2
SMARCA4-204ENST00000444061 IL17CQ9P0M4 197 aa13.79□□□□□ -0.2
SMARCA4-204ENST00000444061 PPM1HQ9ULR3 514 aa13.79□□□□□ -0.2
SMARCA4-204ENST00000444061 CORO2BQ9UQ03 480 aa13.79□□□□□ -0.2
SMARCA4-204ENST00000444061 TCEA3O75764 348 aa13.78□□□□□ -0.2
SMARCA4-204ENST00000444061 LEPRP48357 1165 aaKnown RBP13.78□□□□□ -0.2
SMARCA4-204ENST00000444061 GSTM4Q03013 218 aa13.78□□□□□ -0.2
SMARCA4-204ENST00000444061 LILRA6Q6PI73 481 aa13.78□□□□□ -0.2
SMARCA4-204ENST00000444061 THOC6Q86W42 341 aaKnown RBP13.78□□□□□ -0.2
SMARCA4-204ENST00000444061 RNF148Q8N7C7 305 aa13.78□□□□□ -0.2
SMARCA4-204ENST00000444061 KHSRPQ92945 711 aaKnown RBP eCLIP13.78□□□□□ -0.2
SMARCA4-204ENST00000444061 THAP11Q96EK4 314 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms