RNA–Protein interactions for RNA: ENST00000443197.5

CALD1-210, Transcript of caldesmon 1, humanhuman

TSL 5

Gene CALD1, Length 4,173 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-210ENST00000443197 PRLP01236 227 aa10.36□□□□□ -0.75
CALD1-210ENST00000443197 IGLV3-27P01718 113 aa10.36□□□□□ -0.75
CALD1-210ENST00000443197 CTSEP14091 401 aa10.36□□□□□ -0.75
CALD1-210ENST00000443197 ARRB2P32121 409 aa10.36□□□□□ -0.75
CALD1-210ENST00000443197 CLCN4P51793 760 aa10.36□□□□□ -0.75
CALD1-210ENST00000443197 CLCNKAP51800 687 aa10.36□□□□□ -0.75
CALD1-210ENST00000443197 ERVPABLB-1P60509 514 aa10.36□□□□□ -0.75
CALD1-210ENST00000443197 IL5RAQ01344 420 aa10.36□□□□□ -0.75
CALD1-210ENST00000443197 BNIP2Q12982 314 aa10.36□□□□□ -0.75
CALD1-210ENST00000443197 TP53BP2Q13625 1128 aa10.36□□□□□ -0.75
CALD1-210ENST00000443197 AGTRAPQ6RW13 159 aa10.36□□□□□ -0.75
CALD1-210ENST00000443197 MTSS1LQ765P7 747 aa10.36□□□□□ -0.75
CALD1-210ENST00000443197 OOSP2Q86WS3 158 aa10.36□□□□□ -0.75
CALD1-210ENST00000443197 TCAIMQ8N3R3 496 aa10.36□□□□□ -0.75
CALD1-210ENST00000443197 DDX51Q8N8A6 666 aaKnown RBP eCLIP10.36□□□□□ -0.75
CALD1-210ENST00000443197 LMNTD1Q8N9Z9 388 aa10.36□□□□□ -0.75
CALD1-210ENST00000443197 PIH1D2Q8WWB5 315 aa10.36□□□□□ -0.75
CALD1-210ENST00000443197 FGF13Q92913 245 aa10.36□□□□□ -0.75
CALD1-210ENST00000443197 BBS4Q96RK4 519 aa10.36□□□□□ -0.75
CALD1-210ENST00000443197 C9orf16Q9BUW7 83 aa10.36□□□□□ -0.75
CALD1-210ENST00000443197 POPDC3Q9HBV1 291 aa10.36□□□□□ -0.75
CALD1-210ENST00000443197 CCDC177Q9NQR7 707 aaPredicted RBP10.36□□□□□ -0.75
CALD1-210ENST00000443197 GIMAP4Q9NUV9 329 aa10.36□□□□□ -0.75
CALD1-210ENST00000443197 NUMA1Q14980 2115 aa10.36□□□□□ -0.75
CALD1-210ENST00000443197 PTPRFP10586 1907 aa10.36□□□□□ -0.75
CALD1-210ENST00000443197 FAM92AA1XBS5 289 aa10.36□□□□□ -0.75
CALD1-210ENST00000443197 PDLIM1O00151 329 aa10.36□□□□□ -0.75
CALD1-210ENST00000443197 STX16O14662 325 aa10.36□□□□□ -0.75
CALD1-210ENST00000443197 MAP3K13O43283 966 aa10.36□□□□□ -0.75
CALD1-210ENST00000443197 LATO43561 262 aa10.36□□□□□ -0.75
CALD1-210ENST00000443197 KDM1AO60341 852 aa10.36□□□□□ -0.75
CALD1-210ENST00000443197 HNRNPA1P09651 372 aaKnown RBP eCLIP10.36□□□□□ -0.75
CALD1-210ENST00000443197 MYCLP1P12525 358 aaPredicted RBP10.36□□□□□ -0.75
CALD1-210ENST00000443197 PLA2G16P53816 162 aa10.36□□□□□ -0.75
CALD1-210ENST00000443197 C2orf80Q0P641 193 aa10.36□□□□□ -0.75
CALD1-210ENST00000443197 ANKRD26P1Q6NSI1 321 aa10.36□□□□□ -0.75
CALD1-210ENST00000443197 BNIPLQ7Z465 357 aa10.36□□□□□ -0.75
CALD1-210ENST00000443197 HSD11B1LQ7Z5J1 315 aa10.36□□□□□ -0.75
CALD1-210ENST00000443197 LSMEM2Q8N112 164 aa10.36□□□□□ -0.75
CALD1-210ENST00000443197 CBR4Q8N4T8 237 aa10.36□□□□□ -0.75
CALD1-210ENST00000443197 HERVK_113Q902F9 699 aa10.36□□□□□ -0.75
CALD1-210ENST00000443197 GLYATL1Q969I3 302 aa10.36□□□□□ -0.75
CALD1-210ENST00000443197 AURKBQ96GD4 344 aaPredicted RBP10.36□□□□□ -0.75
CALD1-210ENST00000443197 ITCHQ96J02 903 aa10.36□□□□□ -0.75
CALD1-210ENST00000443197 UBXN10Q96LJ8 280 aa10.36□□□□□ -0.75
CALD1-210ENST00000443197 C12orf66Q96MD2 445 aa10.36□□□□□ -0.75
CALD1-210ENST00000443197 ZSWIM3Q96MP5 696 aa10.36□□□□□ -0.75
CALD1-210ENST00000443197 ANKRD27Q96NW4 1050 aa10.36□□□□□ -0.75
CALD1-210ENST00000443197 PLEKHG4BQ96PX9 1271 aa10.36□□□□□ -0.75
CALD1-210ENST00000443197 TUBGCP5Q96RT8 1024 aa10.36□□□□□ -0.75
CALD1-210ENST00000443197 CCM2Q9BSQ5 444 aa10.36□□□□□ -0.75
CALD1-210ENST00000443197 RETREG1Q9H6L5 497 aa10.36□□□□□ -0.75
CALD1-210ENST00000443197 FARSBQ9NSD9 589 aaKnown RBP10.36□□□□□ -0.75
CALD1-210ENST00000443197 EDDM13A0A1B0GTR0 161 aa10.35□□□□□ -0.75
CALD1-210ENST00000443197 A0A1W2PP55 124 aa10.35□□□□□ -0.75
CALD1-210ENST00000443197 GSAPA4D1B5 854 aa10.35□□□□□ -0.75
CALD1-210ENST00000443197 CAPN14A8MX76 684 aa10.35□□□□□ -0.75
CALD1-210ENST00000443197 PEX11BO96011 259 aa10.35□□□□□ -0.75
CALD1-210ENST00000443197 ANXA6P08133 673 aa10.35□□□□□ -0.75
CALD1-210ENST00000443197 CCR2P41597 374 aa10.35□□□□□ -0.75
CALD1-210ENST00000443197 NEDD8Q15843 81 aa10.35□□□□□ -0.75
CALD1-210ENST00000443197 SWT1Q5T5J6 900 aaKnown RBP10.35□□□□□ -0.75
CALD1-210ENST00000443197 CES4AQ5XG92 561 aa10.35□□□□□ -0.75
CALD1-210ENST00000443197 FRG2Q64ET8 278 aa10.35□□□□□ -0.75
CALD1-210ENST00000443197 TMEM214Q6NUQ4 689 aaKnown RBP10.35□□□□□ -0.75
CALD1-210ENST00000443197 P3H2Q8IVL5 708 aa10.35□□□□□ -0.75
CALD1-210ENST00000443197 RMND5BQ96G75 393 aaPredicted RBP10.35□□□□□ -0.75
CALD1-210ENST00000443197 FRG2BQ96QU4 278 aa10.35□□□□□ -0.75
CALD1-210ENST00000443197 RIBC2Q9H4K1 309 aa10.35□□□□□ -0.75
CALD1-210ENST00000443197 LINC01553A4QN01 128 aa10.35□□□□□ -0.75
CALD1-210ENST00000443197 PAX7P23759 505 aa10.35□□□□□ -0.75
CALD1-210ENST00000443197 HTR1BP28222 390 aa10.35□□□□□ -0.75
CALD1-210ENST00000443197 ARL4DP49703 201 aa10.35□□□□□ -0.75
CALD1-210ENST00000443197 MTTPP55157 894 aa10.35□□□□□ -0.75
CALD1-210ENST00000443197 HKDC1Q2TB90 917 aa10.35□□□□□ -0.75
CALD1-210ENST00000443197 CTSL3PQ5NE16 218 aa10.35□□□□□ -0.75
CALD1-210ENST00000443197 LETMD1Q6P1Q0 360 aa10.35□□□□□ -0.75
CALD1-210ENST00000443197 MED27Q6P2C8 311 aa10.35□□□□□ -0.75
CALD1-210ENST00000443197 RGL4Q8IZJ4 473 aa10.35□□□□□ -0.75
CALD1-210ENST00000443197 EID3Q8N140 333 aa10.35□□□□□ -0.75
CALD1-210ENST00000443197 ANKLE1Q8NAG6 615 aa10.35□□□□□ -0.75
CALD1-210ENST00000443197 UTP15Q8TED0 518 aaKnown RBP10.35□□□□□ -0.75
CALD1-210ENST00000443197 RAD51AP1Q96B01 352 aa10.35□□□□□ -0.75
CALD1-210ENST00000443197 OTUB2Q96DC9 234 aa10.35□□□□□ -0.75
CALD1-210ENST00000443197 RAPGEFL1Q9UHV5 662 aa10.35□□□□□ -0.75
CALD1-210ENST00000443197 PCTPQ9UKL6 214 aa10.35□□□□□ -0.75
CALD1-210ENST00000443197 FPGTO14772 594 aa10.35□□□□□ -0.75
CALD1-210ENST00000443197 KAT7O95251 611 aa10.35□□□□□ -0.75
CALD1-210ENST00000443197 RASGRP1O95267 797 aa10.35□□□□□ -0.75
CALD1-210ENST00000443197 UQCRBP14927 111 aa10.35□□□□□ -0.75
CALD1-210ENST00000443197 CDH2P19022 906 aaPredicted RBP10.35□□□□□ -0.75
CALD1-210ENST00000443197 OR4F3Q6IEY1 312 aa10.35□□□□□ -0.75
CALD1-210ENST00000443197 THOC6Q86W42 341 aaKnown RBP10.35□□□□□ -0.75
CALD1-210ENST00000443197 KRTCAP2Q8N6L1 136 aa10.35□□□□□ -0.75
CALD1-210ENST00000443197 GPR150Q8NGU9 434 aa10.35□□□□□ -0.75
CALD1-210ENST00000443197 NELL1Q92832 810 aa10.35□□□□□ -0.75
CALD1-210ENST00000443197 ROPN1LQ96C74 230 aa10.35□□□□□ -0.75
CALD1-210ENST00000443197 ATOH8Q96SQ7 321 aa10.35□□□□□ -0.75
CALD1-210ENST00000443197 PKP2Q99959 881 aa10.35□□□□□ -0.75
CALD1-210ENST00000443197 CCDC3Q9BQI4 270 aa10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms