RNA–Protein interactions for RNA: ENST00000442975.6

CDKN3-204, Transcript of cyclin dependent kinase inhibitor 3, humanhuman

TSL 1 (best) BASIC

Gene CDKN3, Length 727 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN3-204ENST00000442975 MAD1L1Q9Y6D9 718 aa20.41■□□□□ 0.86
CDKN3-204ENST00000442975 SDR42E2A6NKP2 422 aa20.4■□□□□ 0.86
CDKN3-204ENST00000442975 KDM1AO60341 852 aa20.4■□□□□ 0.86
CDKN3-204ENST00000442975 SCRG1O75711 98 aa20.4■□□□□ 0.86
CDKN3-204ENST00000442975 NTRK1P04629 796 aa20.4■□□□□ 0.86
CDKN3-204ENST00000442975 RPN2P04844 631 aa20.4■□□□□ 0.86
CDKN3-204ENST00000442975 RPS3P23396 243 aaKnown RBP eCLIP20.4■□□□□ 0.86
CDKN3-204ENST00000442975 AOAHP28039 575 aa20.4■□□□□ 0.86
CDKN3-204ENST00000442975 FMO4P31512 558 aa20.4■□□□□ 0.86
CDKN3-204ENST00000442975 ABRQ12979 859 aa20.4■□□□□ 0.86
CDKN3-204ENST00000442975 TYSND1Q2T9J0 566 aa20.4■□□□□ 0.86
CDKN3-204ENST00000442975 CTSL3PQ5NE16 218 aa20.4■□□□□ 0.86
CDKN3-204ENST00000442975 ZNF470Q6ECI4 717 aa20.4■□□□□ 0.86
CDKN3-204ENST00000442975 SPESP1Q6UW49 350 aa20.4■□□□□ 0.86
CDKN3-204ENST00000442975 PPIL6Q8IXY8 311 aa20.4■□□□□ 0.86
CDKN3-204ENST00000442975 LPGAT1Q92604 370 aa20.4■□□□□ 0.86
CDKN3-204ENST00000442975 SLC45A3Q96JT2 553 aa20.4■□□□□ 0.86
CDKN3-204ENST00000442975 PITPNM3Q9BZ71 974 aa20.4■□□□□ 0.86
CDKN3-204ENST00000442975 SEMA4CQ9C0C4 833 aa20.4■□□□□ 0.86
CDKN3-204ENST00000442975 CDYLQ9Y232 598 aa20.4■□□□□ 0.86
CDKN3-204ENST00000442975 MRPS18BQ9Y676 258 aaKnown RBP20.4■□□□□ 0.86
CDKN3-204ENST00000442975 NKX2-8O15522 239 aa20.39■□□□□ 0.85
CDKN3-204ENST00000442975 CPNE3O75131 537 aaKnown RBP20.39■□□□□ 0.85
CDKN3-204ENST00000442975 GPC4O75487 556 aa20.39■□□□□ 0.85
CDKN3-204ENST00000442975 CHRM5P08912 532 aaPredicted RBP20.39■□□□□ 0.85
CDKN3-204ENST00000442975 FAM87AP0C7U9 286 aa20.39■□□□□ 0.85
CDKN3-204ENST00000442975 CCNYL3P0C7X3 344 aa20.39■□□□□ 0.85
CDKN3-204ENST00000442975 UGT2B7P16662 529 aa20.39■□□□□ 0.85
CDKN3-204ENST00000442975 OGNP20774 298 aaKnown RBP20.39■□□□□ 0.85
CDKN3-204ENST00000442975 THOC5Q13769 683 aaKnown RBP20.39■□□□□ 0.85
CDKN3-204ENST00000442975 TBR1Q16650 682 aa20.39■□□□□ 0.85
CDKN3-204ENST00000442975 ANKRD20A4Q4UJ75 823 aa20.39■□□□□ 0.85
CDKN3-204ENST00000442975 NEPROQ6NW34 567 aa20.39■□□□□ 0.85
CDKN3-204ENST00000442975 BPHLQ86WA6 291 aaPredicted RBP20.39■□□□□ 0.85
CDKN3-204ENST00000442975 DCUN1D3Q8IWE4 304 aa20.39■□□□□ 0.85
CDKN3-204ENST00000442975 NAT8LQ8N9F0 302 aa20.39■□□□□ 0.85
CDKN3-204ENST00000442975 ZNF501Q96CX3 271 aaPredicted RBP20.39■□□□□ 0.85
CDKN3-204ENST00000442975 NAPGQ99747 312 aaPredicted RBP20.39■□□□□ 0.85
CDKN3-204ENST00000442975 SPHK1Q9NYA1 384 aa20.39■□□□□ 0.85
CDKN3-204ENST00000442975 OR6C2Q9NZP2 312 aa20.39■□□□□ 0.85
CDKN3-204ENST00000442975 RUVBL2Q9Y230 463 aaKnown RBP20.39■□□□□ 0.85
CDKN3-204ENST00000442975 CRYL1Q9Y2S2 319 aa20.39■□□□□ 0.85
CDKN3-204ENST00000442975 FAM237BA0A1B0GVD1 139 aa20.38■□□□□ 0.85
CDKN3-204ENST00000442975 TMEM150CB9EJG8 249 aa20.38■□□□□ 0.85
CDKN3-204ENST00000442975 NIPSNAP2O75323 286 aa20.38■□□□□ 0.85
CDKN3-204ENST00000442975 KATNA1O75449 491 aa20.38■□□□□ 0.85
CDKN3-204ENST00000442975 MT-ND3P03897 115 aa20.38■□□□□ 0.85
CDKN3-204ENST00000442975 F7P08709 466 aaPredicted RBP20.38■□□□□ 0.85
CDKN3-204ENST00000442975 PKLRP30613 574 aa20.38■□□□□ 0.85
CDKN3-204ENST00000442975 C19orf57Q0VDD7 668 aa20.38■□□□□ 0.85
CDKN3-204ENST00000442975 CDC20Q12834 499 aa20.38■□□□□ 0.85
CDKN3-204ENST00000442975 ARMC3Q5W041 872 aa20.38■□□□□ 0.85
CDKN3-204ENST00000442975 C16orf46Q6P387 395 aa20.38■□□□□ 0.85
CDKN3-204ENST00000442975 UNC5DQ6UXZ4 953 aa20.38■□□□□ 0.85
CDKN3-204ENST00000442975 TAX1BP1Q86VP1 789 aa20.38■□□□□ 0.85
CDKN3-204ENST00000442975 OR8K5Q8NH50 307 aa20.38■□□□□ 0.85
CDKN3-204ENST00000442975 TRAPPC9Q96Q05 1148 aa20.38■□□□□ 0.85
CDKN3-204ENST00000442975 KCND1Q9NSA2 647 aa20.38■□□□□ 0.85
CDKN3-204ENST00000442975 PADI1Q9ULC6 663 aa20.38■□□□□ 0.85
CDKN3-204ENST00000442975 CTAGE9A4FU28 777 aa20.37■□□□□ 0.85
CDKN3-204ENST00000442975 ISM1B1AKI9 464 aa20.37■□□□□ 0.85
CDKN3-204ENST00000442975 H3BMM5 538 aa20.37■□□□□ 0.85
CDKN3-204ENST00000442975 SLCO2B1O94956 709 aa20.37■□□□□ 0.85
CDKN3-204ENST00000442975 ESR1P03372 595 aa20.37■□□□□ 0.85
CDKN3-204ENST00000442975 TPBGLP0DKB5 382 aa20.37■□□□□ 0.85
CDKN3-204ENST00000442975 F8A1P23610 371 aa20.37■□□□□ 0.85
CDKN3-204ENST00000442975 BDKRB1P46663 353 aa20.37■□□□□ 0.85
CDKN3-204ENST00000442975 RAB28P51157 221 aa20.37■□□□□ 0.85
CDKN3-204ENST00000442975 PTK6Q13882 451 aa20.37■□□□□ 0.85
CDKN3-204ENST00000442975 LINC00303Q3SY05 128 aa20.37■□□□□ 0.85
CDKN3-204ENST00000442975 RNASEH2BQ5TBB1 312 aaKnown RBP20.37■□□□□ 0.85
CDKN3-204ENST00000442975 ATP1A1-AS1Q5TC04 95 aa20.37■□□□□ 0.85
CDKN3-204ENST00000442975 BORAQ6PGQ7 559 aa20.37■□□□□ 0.85
CDKN3-204ENST00000442975 CNSTQ6PJW8 725 aa20.37■□□□□ 0.85
CDKN3-204ENST00000442975 CILP2Q8IUL8 1156 aa20.37■□□□□ 0.85
CDKN3-204ENST00000442975 KLHL7Q8IXQ5 586 aa20.37■□□□□ 0.85
CDKN3-204ENST00000442975 ZNF843Q8N446 348 aa20.37■□□□□ 0.85
CDKN3-204ENST00000442975 C19orf47Q8N9M1 422 aaKnown RBP20.37■□□□□ 0.85
CDKN3-204ENST00000442975 CT55Q8WUE5 264 aa20.37■□□□□ 0.85
CDKN3-204ENST00000442975 N4BP2L2Q92802 583 aaPredicted RBP20.37■□□□□ 0.85
CDKN3-204ENST00000442975 MED8Q96G25 268 aa20.37■□□□□ 0.85
CDKN3-204ENST00000442975 BIRC8Q96P09 236 aa20.37■□□□□ 0.85
CDKN3-204ENST00000442975 IL17FQ96PD4 163 aa20.37■□□□□ 0.85
CDKN3-204ENST00000442975 FCRL4Q96PJ5 515 aa20.37■□□□□ 0.85
CDKN3-204ENST00000442975 TCF12Q99081 682 aa20.37■□□□□ 0.85
CDKN3-204ENST00000442975 LHX9Q9NQ69 397 aa20.37■□□□□ 0.85
CDKN3-204ENST00000442975 C20orf96Q9NUD7 363 aaPredicted RBP20.37■□□□□ 0.85
CDKN3-204ENST00000442975 VPS9D1Q9Y2B5 631 aa20.37■□□□□ 0.85
CDKN3-204ENST00000442975 MAGEB16A2A368 324 aa20.36■□□□□ 0.85
CDKN3-204ENST00000442975 E5RI56 91 aa20.36■□□□□ 0.85
CDKN3-204ENST00000442975 KPNA5O15131 536 aa20.36■□□□□ 0.85
CDKN3-204ENST00000442975 TCN2P20062 427 aa20.36■□□□□ 0.85
CDKN3-204ENST00000442975 CHRM3P20309 590 aa20.36■□□□□ 0.85
CDKN3-204ENST00000442975 CYP2A7P20853 494 aa20.36■□□□□ 0.85
CDKN3-204ENST00000442975 MAGEA3P43357 314 aa20.36■□□□□ 0.85
CDKN3-204ENST00000442975 MC1RQ01726 317 aa20.36■□□□□ 0.85
CDKN3-204ENST00000442975 DNASE1L3Q13609 305 aa20.36■□□□□ 0.85
CDKN3-204ENST00000442975 DEFB110Q30KQ9 67 aa20.36■□□□□ 0.85
CDKN3-204ENST00000442975 PRAMEF17Q5VTA0 474 aa20.36■□□□□ 0.85
CDKN3-204ENST00000442975 IZUMO3Q5VZ72 239 aa20.36■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms