RNA–Protein interactions for RNA: ENST00000442054.5

CDC42BPA-208, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best)

Gene CDC42BPA, Length 3,786 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-208ENST00000442054 NMBRP28336 390 aa7.24□□□□□ -1.25
CDC42BPA-208ENST00000442054 SPAM1P38567 509 aa7.24□□□□□ -1.25
CDC42BPA-208ENST00000442054 ZFP36L2P47974 494 aaKnown RBP7.24□□□□□ -1.25
CDC42BPA-208ENST00000442054 EMP3P54852 163 aa7.24□□□□□ -1.25
CDC42BPA-208ENST00000442054 INHBCP55103 352 aa7.24□□□□□ -1.25
CDC42BPA-208ENST00000442054 CDH17Q12864 832 aa7.24□□□□□ -1.25
CDC42BPA-208ENST00000442054 MPP3Q13368 585 aa7.24□□□□□ -1.25
CDC42BPA-208ENST00000442054 NR0B2Q15466 257 aa7.24□□□□□ -1.25
CDC42BPA-208ENST00000442054 BROXQ5VW32 411 aa7.24□□□□□ -1.25
CDC42BPA-208ENST00000442054 MRNIPQ6NTE8 343 aa7.24□□□□□ -1.25
CDC42BPA-208ENST00000442054 LYSMD3Q7Z3D4 306 aa7.24□□□□□ -1.25
CDC42BPA-208ENST00000442054 DSELQ8IZU8 1212 aa7.24□□□□□ -1.25
CDC42BPA-208ENST00000442054 RBFAQ8N0V3 343 aa7.24□□□□□ -1.25
CDC42BPA-208ENST00000442054 OR52K2Q8NGK3 314 aa7.24□□□□□ -1.25
CDC42BPA-208ENST00000442054 NAT14Q8WUY8 206 aa7.24□□□□□ -1.25
CDC42BPA-208ENST00000442054 JPH3Q8WXH2 748 aaPredicted RBP7.24□□□□□ -1.25
CDC42BPA-208ENST00000442054 CMTM5Q96DZ9 223 aa7.24□□□□□ -1.25
CDC42BPA-208ENST00000442054 TEKT5Q96M29 485 aa7.24□□□□□ -1.25
CDC42BPA-208ENST00000442054 OR2M4Q96R27 311 aa7.24□□□□□ -1.25
CDC42BPA-208ENST00000442054 TBL1YQ9BQ87 522 aa7.24□□□□□ -1.25
CDC42BPA-208ENST00000442054 TRIM54Q9BYV2 358 aa7.24□□□□□ -1.25
CDC42BPA-208ENST00000442054 FAM96AQ9H5X1 160 aa7.24□□□□□ -1.25
CDC42BPA-208ENST00000442054 CHRAC1Q9NRG0 131 aa7.24□□□□□ -1.25
CDC42BPA-208ENST00000442054 SPATS2LQ9NUQ6 558 aaKnown RBP7.24□□□□□ -1.25
CDC42BPA-208ENST00000442054 C6orf203Q9P0P8 240 aaPredicted RBP7.24□□□□□ -1.25
CDC42BPA-208ENST00000442054 RAP2CQ9Y3L5 183 aa7.24□□□□□ -1.25
CDC42BPA-208ENST00000442054 SPTBN4Q9H254 2564 aa7.24□□□□□ -1.25
CDC42BPA-208ENST00000442054 POM121BA6NF01 834 aa7.23□□□□□ -1.25
CDC42BPA-208ENST00000442054 DLX3O60479 287 aa7.23□□□□□ -1.25
CDC42BPA-208ENST00000442054 H2AFYO75367 372 aaKnown RBP7.23□□□□□ -1.25
CDC42BPA-208ENST00000442054 PGLSO95336 258 aa7.23□□□□□ -1.25
CDC42BPA-208ENST00000442054 OR56A5P0C7T3 313 aa7.23□□□□□ -1.25
CDC42BPA-208ENST00000442054 ZCCHC18P0CG32 403 aa7.23□□□□□ -1.25
CDC42BPA-208ENST00000442054 ZNF7P17097 686 aaPredicted RBP7.23□□□□□ -1.25
CDC42BPA-208ENST00000442054 PEX19P40855 299 aa7.23□□□□□ -1.25
CDC42BPA-208ENST00000442054 DNAJB13P59910 316 aa7.23□□□□□ -1.25
CDC42BPA-208ENST00000442054 SRP54P61011 504 aaKnown RBP7.23□□□□□ -1.25
CDC42BPA-208ENST00000442054 UGT3A2Q3SY77 523 aa7.23□□□□□ -1.25
CDC42BPA-208ENST00000442054 HMBOX1Q6NT76 420 aa7.23□□□□□ -1.25
CDC42BPA-208ENST00000442054 SLC41A1Q8IVJ1 513 aa7.23□□□□□ -1.25
CDC42BPA-208ENST00000442054 PQLC1Q8N2U9 271 aa7.23□□□□□ -1.25
CDC42BPA-208ENST00000442054 OR4K2Q8NGD2 314 aa7.23□□□□□ -1.25
CDC42BPA-208ENST00000442054 HDAC8Q9BY41 377 aa7.23□□□□□ -1.25
CDC42BPA-208ENST00000442054 APC2O95996 2303 aa7.23□□□□□ -1.25
CDC42BPA-208ENST00000442054 C7orf72A4D263 438 aa7.23□□□□□ -1.25
CDC42BPA-208ENST00000442054 ERI2A8K979 691 aaKnown RBP7.23□□□□□ -1.25
CDC42BPA-208ENST00000442054 H0YJX3 145 aa7.23□□□□□ -1.25
CDC42BPA-208ENST00000442054 TK2O00142 265 aa7.23□□□□□ -1.25
CDC42BPA-208ENST00000442054 SDHDO14521 159 aa7.23□□□□□ -1.25
CDC42BPA-208ENST00000442054 YPEL5P62699 121 aa7.23□□□□□ -1.25
CDC42BPA-208ENST00000442054 YBX1P67809 324 aaKnown RBP7.23□□□□□ -1.25
CDC42BPA-208ENST00000442054 NRG1Q02297 640 aaPredicted RBP7.23□□□□□ -1.25
CDC42BPA-208ENST00000442054 FOLH1Q04609 750 aa7.23□□□□□ -1.25
CDC42BPA-208ENST00000442054 HSPA14Q0VDF9 509 aa7.23□□□□□ -1.25
CDC42BPA-208ENST00000442054 PDK3Q15120 406 aa7.23□□□□□ -1.25
CDC42BPA-208ENST00000442054 TMEM220Q6QAJ8 160 aa7.23□□□□□ -1.25
CDC42BPA-208ENST00000442054 SATL1Q86VE3 508 aa7.23□□□□□ -1.25
CDC42BPA-208ENST00000442054 ZSCAN1Q8NBB4 408 aa7.23□□□□□ -1.25
CDC42BPA-208ENST00000442054 SERBP1Q8NC51 408 aaKnown RBP eCLIP7.23□□□□□ -1.25
CDC42BPA-208ENST00000442054 STMN2Q93045 179 aa7.23□□□□□ -1.25
CDC42BPA-208ENST00000442054 CCDC3Q9BQI4 270 aa7.23□□□□□ -1.25
CDC42BPA-208ENST00000442054 ST14Q9Y5Y6 855 aa7.23□□□□□ -1.25
CDC42BPA-208ENST00000442054 A0A096LPK6 155 aa7.23□□□□□ -1.25
CDC42BPA-208ENST00000442054 RGSL1A5PLK6 1076 aa7.23□□□□□ -1.25
CDC42BPA-208ENST00000442054 FAM149AA5PLN7 773 aa7.23□□□□□ -1.25
CDC42BPA-208ENST00000442054 HIST1H2AGP0C0S8 130 aaPredicted RBP7.23□□□□□ -1.25
CDC42BPA-208ENST00000442054 TYRP1P17643 537 aa7.23□□□□□ -1.25
CDC42BPA-208ENST00000442054 TFEBP19484 476 aa7.23□□□□□ -1.25
CDC42BPA-208ENST00000442054 SPINK2P20155 84 aa7.23□□□□□ -1.25
CDC42BPA-208ENST00000442054 HIST1H2ADP20671 130 aa7.23□□□□□ -1.25
CDC42BPA-208ENST00000442054 TRAF2Q12933 501 aa7.23□□□□□ -1.25
CDC42BPA-208ENST00000442054 IRF4Q15306 451 aa7.23□□□□□ -1.25
CDC42BPA-208ENST00000442054 C3orf38Q5JPI3 329 aa7.23□□□□□ -1.25
CDC42BPA-208ENST00000442054 TCHHL1Q5QJ38 904 aaPredicted RBP7.23□□□□□ -1.25
CDC42BPA-208ENST00000442054 TMTC4Q5T4D3 741 aa7.23□□□□□ -1.25
CDC42BPA-208ENST00000442054 LIPMQ5VYY2 423 aa7.23□□□□□ -1.25
CDC42BPA-208ENST00000442054 ZDHHC20Q5W0Z9 365 aa7.23□□□□□ -1.25
CDC42BPA-208ENST00000442054 STRA8Q7Z7C7 330 aa7.23□□□□□ -1.25
CDC42BPA-208ENST00000442054 GALNT7Q86SF2 657 aa7.23□□□□□ -1.25
CDC42BPA-208ENST00000442054 AMZ2Q86W34 360 aa7.23□□□□□ -1.25
CDC42BPA-208ENST00000442054 CARM1Q86X55 608 aa7.23□□□□□ -1.25
CDC42BPA-208ENST00000442054 GPR135Q8IZ08 494 aa7.23□□□□□ -1.25
CDC42BPA-208ENST00000442054 RP9Q8TA86 221 aaKnown RBP7.23□□□□□ -1.25
CDC42BPA-208ENST00000442054 ELMO1Q92556 727 aa7.23□□□□□ -1.25
CDC42BPA-208ENST00000442054 KIAA1143Q96AT1 154 aaPredicted RBP7.23□□□□□ -1.25
CDC42BPA-208ENST00000442054 ZNF669Q96BR6 464 aaPredicted RBP7.23□□□□□ -1.25
CDC42BPA-208ENST00000442054 HIST1H2AHQ96KK5 128 aa7.23□□□□□ -1.25
CDC42BPA-208ENST00000442054 ZNF597Q96LX8 424 aa7.23□□□□□ -1.25
CDC42BPA-208ENST00000442054 FERD3LQ96RJ6 166 aa7.23□□□□□ -1.25
CDC42BPA-208ENST00000442054 HIST1H2AJQ99878 128 aa7.23□□□□□ -1.25
CDC42BPA-208ENST00000442054 GPATCH1Q9BRR8 931 aaKnown RBP7.23□□□□□ -1.25
CDC42BPA-208ENST00000442054 H2AFJQ9BTM1 129 aa7.23□□□□□ -1.25
CDC42BPA-208ENST00000442054 VCXQ9H320 206 aa7.23□□□□□ -1.25
CDC42BPA-208ENST00000442054 CCDC86Q9H6F5 360 aaKnown RBP7.23□□□□□ -1.25
CDC42BPA-208ENST00000442054 WDR55Q9H6Y2 383 aaPredicted RBP7.23□□□□□ -1.25
CDC42BPA-208ENST00000442054 NMRAL1Q9HBL8 299 aa7.23□□□□□ -1.25
CDC42BPA-208ENST00000442054 PILRBQ9UKJ0 227 aa7.23□□□□□ -1.25
CDC42BPA-208ENST00000442054 RAB26Q9ULW5 256 aa7.23□□□□□ -1.25
CDC42BPA-208ENST00000442054 ASF1AQ9Y294 204 aa7.23□□□□□ -1.25
CDC42BPA-208ENST00000442054 HS3ST3A1Q9Y663 406 aa7.23□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms