RNA–Protein interactions for RNA: ENST00000441074.3

LTBR-203, Transcript of lymphotoxin beta receptor, humanhuman

TSL 1 (best)

Gene LTBR, Length 2,327 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-203ENST00000441074 HHLA1C9JL84 531 aa11.67□□□□□ -0.54
LTBR-203ENST00000441074 GSTA4O15217 222 aa11.67□□□□□ -0.54
LTBR-203ENST00000441074 MAFKO60675 156 aa11.67□□□□□ -0.54
LTBR-203ENST00000441074 PAPSS2O95340 614 aaPredicted RBP11.67□□□□□ -0.54
LTBR-203ENST00000441074 GOT2P00505 430 aaKnown RBP11.67□□□□□ -0.54
LTBR-203ENST00000441074 SELPP16109 830 aa11.67□□□□□ -0.54
LTBR-203ENST00000441074 CD36P16671 472 aa11.67□□□□□ -0.54
LTBR-203ENST00000441074 FDXRP22570 491 aa11.67□□□□□ -0.54
LTBR-203ENST00000441074 PRKACGP22612 351 aa11.67□□□□□ -0.54
LTBR-203ENST00000441074 PRKCDQ05655 676 aa11.67□□□□□ -0.54
LTBR-203ENST00000441074 OR4D1Q15615 310 aa11.67□□□□□ -0.54
LTBR-203ENST00000441074 CES5AQ6NT32 575 aa11.67□□□□□ -0.54
LTBR-203ENST00000441074 GLB1LQ6UWU2 654 aa11.67□□□□□ -0.54
LTBR-203ENST00000441074 TMEM179BQ7Z7N9 219 aa11.67□□□□□ -0.54
LTBR-203ENST00000441074 ABI1Q8IZP0 508 aa11.67□□□□□ -0.54
LTBR-203ENST00000441074 RYBPQ8N488 228 aaPredicted RBP11.67□□□□□ -0.54
LTBR-203ENST00000441074 SIMC1Q8NDZ2 872 aa11.67□□□□□ -0.54
LTBR-203ENST00000441074 GPR152Q8TDT2 470 aa11.67□□□□□ -0.54
LTBR-203ENST00000441074 FIG4Q92562 907 aa11.67□□□□□ -0.54
LTBR-203ENST00000441074 MYLPFQ96A32 169 aa11.67□□□□□ -0.54
LTBR-203ENST00000441074 CLIP3Q96DZ5 547 aa11.67□□□□□ -0.54
LTBR-203ENST00000441074 ZNF419Q96HQ0 510 aaPredicted RBP11.67□□□□□ -0.54
LTBR-203ENST00000441074 ARPC5LQ9BPX5 153 aa11.67□□□□□ -0.54
LTBR-203ENST00000441074 ATXN3LQ9H3M9 355 aa11.67□□□□□ -0.54
LTBR-203ENST00000441074 TM9SF3Q9HD45 589 aa11.67□□□□□ -0.54
LTBR-203ENST00000441074 CCNB1IP1Q9NPC3 277 aa11.67□□□□□ -0.54
LTBR-203ENST00000441074 CRNNQ9UBG3 495 aaPredicted RBP11.67□□□□□ -0.54
LTBR-203ENST00000441074 LIMD1Q9UGP4 676 aa11.67□□□□□ -0.54
LTBR-203ENST00000441074 ADGRE2Q9UHX3 823 aa11.67□□□□□ -0.54
LTBR-203ENST00000441074 PCDHB14Q9Y5E9 798 aa11.67□□□□□ -0.54
LTBR-203ENST00000441074 ENPP3O14638 875 aa11.66□□□□□ -0.54
LTBR-203ENST00000441074 RGS10O43665 173 aa11.66□□□□□ -0.54
LTBR-203ENST00000441074 MFN2O95140 757 aa11.66□□□□□ -0.54
LTBR-203ENST00000441074 FTH1P02794 183 aa11.66□□□□□ -0.54
LTBR-203ENST00000441074 TGFBR1P36897 503 aa11.66□□□□□ -0.54
LTBR-203ENST00000441074 DEFA1P59665 94 aa11.66□□□□□ -0.54
LTBR-203ENST00000441074 DEFA3P59666 94 aa11.66□□□□□ -0.54
LTBR-203ENST00000441074 GNG2P59768 71 aa11.66□□□□□ -0.54
LTBR-203ENST00000441074 PWP1Q13610 501 aa11.66□□□□□ -0.54
LTBR-203ENST00000441074 CDK10Q15131 360 aa11.66□□□□□ -0.54
LTBR-203ENST00000441074 CCDC58Q4VC31 144 aa11.66□□□□□ -0.54
LTBR-203ENST00000441074 ATAD3CQ5T2N8 411 aa11.66□□□□□ -0.54
LTBR-203ENST00000441074 KDELC2Q7Z4H8 507 aa11.66□□□□□ -0.54
LTBR-203ENST00000441074 UBE2Q1Q7Z7E8 422 aa11.66□□□□□ -0.54
LTBR-203ENST00000441074 TMEM173Q86WV6 379 aaPredicted RBP11.66□□□□□ -0.54
LTBR-203ENST00000441074 HIPK1Q86Z02 1210 aa11.66□□□□□ -0.54
LTBR-203ENST00000441074 SLC22A15Q8IZD6 547 aa11.66□□□□□ -0.54
LTBR-203ENST00000441074 PNPLA1Q8N8W4 532 aa11.66□□□□□ -0.54
LTBR-203ENST00000441074 OR8J3Q8NGG0 315 aa11.66□□□□□ -0.54
LTBR-203ENST00000441074 OR52E4Q8NGH9 312 aa11.66□□□□□ -0.54
LTBR-203ENST00000441074 SH3RF2Q8TEC5 729 aa11.66□□□□□ -0.54
LTBR-203ENST00000441074 ATOH8Q96SQ7 321 aa11.66□□□□□ -0.54
LTBR-203ENST00000441074 NXF2Q9GZY0 626 aaKnown RBP11.66□□□□□ -0.54
LTBR-203ENST00000441074 MFSD1Q9H3U5 465 aa11.66□□□□□ -0.54
LTBR-203ENST00000441074 TFB2MQ9H5Q4 396 aaKnown RBP11.66□□□□□ -0.54
LTBR-203ENST00000441074 ARNT2Q9HBZ2 717 aa11.66□□□□□ -0.54
LTBR-203ENST00000441074 CSNK1G1Q9HCP0 422 aa11.66□□□□□ -0.54
LTBR-203ENST00000441074 FNIP2Q9P278 1114 aa11.66□□□□□ -0.54
LTBR-203ENST00000441074 EVLQ9UI08 416 aaPredicted RBP11.66□□□□□ -0.54
LTBR-203ENST00000441074 FBXO10Q9UK96 956 aa11.66□□□□□ -0.54
LTBR-203ENST00000441074 SZT2Q5T011 3432 aa11.66□□□□□ -0.54
LTBR-203ENST00000441074 OR2A25A4D2G3 310 aa11.66□□□□□ -0.54
LTBR-203ENST00000441074 GOLGA8CPA6NN73 597 aa11.66□□□□□ -0.54
LTBR-203ENST00000441074 PDZK1P1A8MUH7 402 aa11.66□□□□□ -0.54
LTBR-203ENST00000441074 IFRD1O00458 451 aaPredicted RBP11.66□□□□□ -0.54
LTBR-203ENST00000441074 SNX4O95219 450 aa11.66□□□□□ -0.54
LTBR-203ENST00000441074 FADS2O95864 444 aaKnown RBP11.66□□□□□ -0.54
LTBR-203ENST00000441074 IGLV3-25P01717 112 aa11.66□□□□□ -0.54
LTBR-203ENST00000441074 APOA1P02647 267 aa11.66□□□□□ -0.54
LTBR-203ENST00000441074 HLA-DQB2P05538 268 aa11.66□□□□□ -0.54
LTBR-203ENST00000441074 UROSP10746 265 aa11.66□□□□□ -0.54
LTBR-203ENST00000441074 HOXB8P17481 243 aaPredicted RBP11.66□□□□□ -0.54
LTBR-203ENST00000441074 GTF2E2P29084 291 aaKnown RBP11.66□□□□□ -0.54
LTBR-203ENST00000441074 PCSK1P29120 753 aa11.66□□□□□ -0.54
LTBR-203ENST00000441074 RPL9P32969 192 aaKnown RBP11.66□□□□□ -0.54
LTBR-203ENST00000441074 CLK1P49759 484 aaKnown RBP11.66□□□□□ -0.54
LTBR-203ENST00000441074 ATP6AP1LQ52LC2 224 aa11.66□□□□□ -0.54
LTBR-203ENST00000441074 NOMO2Q5JPE7 1267 aa11.66□□□□□ -0.54
LTBR-203ENST00000441074 TPRG1LQ5T0D9 272 aa11.66□□□□□ -0.54
LTBR-203ENST00000441074 ANKS6Q68DC2 871 aa11.66□□□□□ -0.54
LTBR-203ENST00000441074 SIGIRRQ6IA17 410 aa11.66□□□□□ -0.54
LTBR-203ENST00000441074 OVOS1Q6IE37 1185 aa11.66□□□□□ -0.54
LTBR-203ENST00000441074 PEX5LQ8IYB4 626 aa11.66□□□□□ -0.54
LTBR-203ENST00000441074 PARP16Q8N5Y8 322 aa11.66□□□□□ -0.54
LTBR-203ENST00000441074 OR2T12Q8NG77 320 aa11.66□□□□□ -0.54
LTBR-203ENST00000441074 SLC38A4Q969I6 547 aa11.66□□□□□ -0.54
LTBR-203ENST00000441074 RHBDF1Q96CC6 855 aa11.66□□□□□ -0.54
LTBR-203ENST00000441074 PABPC5Q96DU9 382 aaKnown RBP11.66□□□□□ -0.54
LTBR-203ENST00000441074 RBM22Q9NW64 420 aaKnown RBP eCLIP11.66□□□□□ -0.54
LTBR-203ENST00000441074 NUDT5Q9UKK9 219 aa11.66□□□□□ -0.54
LTBR-203ENST00000441074 ZW10O43264 779 aa11.65□□□□□ -0.54
LTBR-203ENST00000441074 ODC1P11926 461 aa11.65□□□□□ -0.54
LTBR-203ENST00000441074 MAGP20916 626 aa11.65□□□□□ -0.54
LTBR-203ENST00000441074 GGT5P36269 586 aa11.65□□□□□ -0.54
LTBR-203ENST00000441074 KEAP1Q14145 624 aa11.65□□□□□ -0.54
LTBR-203ENST00000441074 LRRC26Q2I0M4 334 aa11.65□□□□□ -0.54
LTBR-203ENST00000441074 TRIM60Q495X7 471 aa11.65□□□□□ -0.54
LTBR-203ENST00000441074 MANEALQ5VSG8 457 aa11.65□□□□□ -0.54
LTBR-203ENST00000441074 LAIR1Q6GTX8 287 aa11.65□□□□□ -0.54
LTBR-203ENST00000441074 LDB1Q86U70 411 aaPredicted RBP11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 63.4 ms