RNA–Protein interactions for RNA: ENST00000440127.1

HMGB3P11-201, Transcript of high mobility group box 3 pseudogene 11, humanhuman

BASIC

Gene HMGB3P11, Length 604 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P11-201ENST00000440127 CDK7P50613 346 aa3.46□□□□□ -1.86
HMGB3P11-201ENST00000440127 EIF3EP60228 445 aaKnown RBP3.46□□□□□ -1.86
HMGB3P11-201ENST00000440127 DYNLT1P63172 113 aa3.46□□□□□ -1.86
HMGB3P11-201ENST00000440127 OTUD4Q01804 1114 aaKnown RBP3.46□□□□□ -1.86
HMGB3P11-201ENST00000440127 IFT88Q13099 833 aa3.46□□□□□ -1.86
HMGB3P11-201ENST00000440127 TFDP2Q14188 446 aa3.46□□□□□ -1.86
HMGB3P11-201ENST00000440127 GRB14Q14449 540 aa3.46□□□□□ -1.86
HMGB3P11-201ENST00000440127 KRT81Q14533 505 aa3.46□□□□□ -1.86
HMGB3P11-201ENST00000440127 ITIH4Q14624 930 aa3.46□□□□□ -1.86
HMGB3P11-201ENST00000440127 MORF4L2Q15014 288 aa3.46□□□□□ -1.86
HMGB3P11-201ENST00000440127 PDK2Q15119 407 aa3.46□□□□□ -1.86
HMGB3P11-201ENST00000440127 OASLQ15646 514 aaKnown RBP3.46□□□□□ -1.86
HMGB3P11-201ENST00000440127 ZBTB6Q15916 424 aa3.46□□□□□ -1.86
HMGB3P11-201ENST00000440127 CNGA3Q16281 694 aa3.46□□□□□ -1.86
HMGB3P11-201ENST00000440127 GPR162Q16538 588 aa3.46□□□□□ -1.86
HMGB3P11-201ENST00000440127 TAZQ16635 292 aa3.46□□□□□ -1.86
HMGB3P11-201ENST00000440127 TSTQ16762 297 aaKnown RBP3.46□□□□□ -1.86
HMGB3P11-201ENST00000440127 GOLGA7BQ2TAP0 167 aa3.46□□□□□ -1.86
HMGB3P11-201ENST00000440127 GALNTL6Q49A17 601 aa3.46□□□□□ -1.86
HMGB3P11-201ENST00000440127 BOLA3Q53S33 107 aa3.46□□□□□ -1.86
HMGB3P11-201ENST00000440127 KCNT1Q5JUK3 1230 aa3.46□□□□□ -1.86
HMGB3P11-201ENST00000440127 UBAP2Q5T6F2 1119 aaKnown RBP3.46□□□□□ -1.86
HMGB3P11-201ENST00000440127 RNASEH2BQ5TBB1 312 aaKnown RBP3.46□□□□□ -1.86
HMGB3P11-201ENST00000440127 FAM205BPQ63HN1 556 aa3.46□□□□□ -1.86
HMGB3P11-201ENST00000440127 ATG16L1Q676U5 607 aa3.46□□□□□ -1.86
HMGB3P11-201ENST00000440127 ARHGAP17Q68EM7 881 aa3.46□□□□□ -1.86
HMGB3P11-201ENST00000440127 ITPRIPL1Q6GPH6 555 aa3.46□□□□□ -1.86
HMGB3P11-201ENST00000440127 NOTUMQ6P988 496 aa3.46□□□□□ -1.86
HMGB3P11-201ENST00000440127 SLC27A1Q6PCB7 646 aa3.46□□□□□ -1.86
HMGB3P11-201ENST00000440127 C6orf89Q6UWU4 347 aa3.46□□□□□ -1.86
HMGB3P11-201ENST00000440127 CLEC9AQ6UXN8 241 aa3.46□□□□□ -1.86
HMGB3P11-201ENST00000440127 CCDC121Q6ZUS5 278 aa3.46□□□□□ -1.86
HMGB3P11-201ENST00000440127 CATSPER4Q7RTX7 472 aa3.46□□□□□ -1.86
HMGB3P11-201ENST00000440127 PIGWQ7Z7B1 504 aa3.46□□□□□ -1.86
HMGB3P11-201ENST00000440127 TADA2BQ86TJ2 420 aa3.46□□□□□ -1.86
HMGB3P11-201ENST00000440127 TMEM110Q86TL2 294 aa3.46□□□□□ -1.86
HMGB3P11-201ENST00000440127 PRUNE1Q86TP1 453 aa3.46□□□□□ -1.86
HMGB3P11-201ENST00000440127 UNC93AQ86WB7 457 aa3.46□□□□□ -1.86
HMGB3P11-201ENST00000440127 MAP7D3Q8IWC1 876 aa3.46□□□□□ -1.86
HMGB3P11-201ENST00000440127 CCDC13Q8IYE1 715 aa3.46□□□□□ -1.86
HMGB3P11-201ENST00000440127 LRRC34Q8IZ02 419 aa3.46□□□□□ -1.86
HMGB3P11-201ENST00000440127 RIBC1Q8N443 379 aaPredicted RBP3.46□□□□□ -1.86
HMGB3P11-201ENST00000440127 LRRC52Q8N7C0 313 aa3.46□□□□□ -1.86
HMGB3P11-201ENST00000440127 CCDC197Q8NCU1 140 aa3.46□□□□□ -1.86
HMGB3P11-201ENST00000440127 ZMIZ2Q8NF64 920 aa3.46□□□□□ -1.86
HMGB3P11-201ENST00000440127 ACTL9Q8TC94 416 aa3.46□□□□□ -1.86
HMGB3P11-201ENST00000440127 ADAMTS15Q8TE58 950 aa3.46□□□□□ -1.86
HMGB3P11-201ENST00000440127 ABHD5Q8WTS1 349 aa3.46□□□□□ -1.86
HMGB3P11-201ENST00000440127 DYDC1Q8WWB3 177 aa3.46□□□□□ -1.86
HMGB3P11-201ENST00000440127 RXFP2Q8WXD0 754 aa3.46□□□□□ -1.86
HMGB3P11-201ENST00000440127 HSPH1Q92598 858 aa3.46□□□□□ -1.86
HMGB3P11-201ENST00000440127 PRCCQ92733 491 aaPredicted RBP3.46□□□□□ -1.86
HMGB3P11-201ENST00000440127 P3H4Q92791 437 aa3.46□□□□□ -1.86
HMGB3P11-201ENST00000440127 C3orf49Q96BT1 292 aa3.46□□□□□ -1.86
HMGB3P11-201ENST00000440127 GRAMD1AQ96CP6 724 aa3.46□□□□□ -1.86
HMGB3P11-201ENST00000440127 HAUS1Q96CS2 278 aa3.46□□□□□ -1.86
HMGB3P11-201ENST00000440127 CABS1Q96KC9 395 aa3.46□□□□□ -1.86
HMGB3P11-201ENST00000440127 C9orf72Q96LT7 481 aa3.46□□□□□ -1.86
HMGB3P11-201ENST00000440127 ZNF317Q96PQ6 595 aaPredicted RBP3.46□□□□□ -1.86
HMGB3P11-201ENST00000440127 PRMT1Q99873 361 aaKnown RBP3.46□□□□□ -1.86
HMGB3P11-201ENST00000440127 MRPL45Q9BRJ2 306 aaKnown RBP3.46□□□□□ -1.86
HMGB3P11-201ENST00000440127 NUDT22Q9BRQ3 303 aa3.46□□□□□ -1.86
HMGB3P11-201ENST00000440127 TMEM121Q9BTD3 319 aa3.46□□□□□ -1.86
HMGB3P11-201ENST00000440127 TUBB6Q9BUF5 446 aa3.46□□□□□ -1.86
HMGB3P11-201ENST00000440127 KRTAP1-5Q9BYS1 174 aa3.46□□□□□ -1.86
HMGB3P11-201ENST00000440127 NSRP1Q9H0G5 558 aaKnown RBP3.46□□□□□ -1.86
HMGB3P11-201ENST00000440127 FAM49AQ9H0Q0 323 aaPredicted RBP3.46□□□□□ -1.86
HMGB3P11-201ENST00000440127 CCDC134Q9H6E4 229 aa3.46□□□□□ -1.86
HMGB3P11-201ENST00000440127 ELAC1Q9H777 363 aaKnown RBP3.46□□□□□ -1.86
HMGB3P11-201ENST00000440127 VPS37BQ9H9H4 285 aa3.46□□□□□ -1.86
HMGB3P11-201ENST00000440127 PCDH9Q9HC56 1237 aa3.46□□□□□ -1.86
HMGB3P11-201ENST00000440127 DNAJC17Q9NVM6 304 aaKnown RBP3.46□□□□□ -1.86
HMGB3P11-201ENST00000440127 IRAK4Q9NWZ3 460 aa3.46□□□□□ -1.86
HMGB3P11-201ENST00000440127 NKIRAS1Q9NYS0 192 aa3.46□□□□□ -1.86
HMGB3P11-201ENST00000440127 HMGXB4Q9UGU5 601 aa3.46□□□□□ -1.86
HMGB3P11-201ENST00000440127 PCSK1NQ9UHG2 260 aa3.46□□□□□ -1.86
HMGB3P11-201ENST00000440127 TSPAN16Q9UKR8 245 aa3.46□□□□□ -1.86
HMGB3P11-201ENST00000440127 UBQLN1Q9UMX0 589 aaKnown RBP3.46□□□□□ -1.86
HMGB3P11-201ENST00000440127 ARHGAP26Q9UNA1 814 aa3.46□□□□□ -1.86
HMGB3P11-201ENST00000440127 DNAJC16Q9Y2G8 782 aa3.46□□□□□ -1.86
HMGB3P11-201ENST00000440127 SLC27A6Q9Y2P4 619 aa3.46□□□□□ -1.86
HMGB3P11-201ENST00000440127 SNX9Q9Y5X1 595 aa3.46□□□□□ -1.86
HMGB3P11-201ENST00000440127 SIRT4Q9Y6E7 314 aaPredicted RBP3.46□□□□□ -1.86
HMGB3P11-201ENST00000440127 SIP14410 1827 aa3.46□□□□□ -1.86
HMGB3P11-201ENST00000440127 LCTP09848 1927 aa3.46□□□□□ -1.86
HMGB3P11-201ENST00000440127 IGKV2D-30A0A075B6S6 120 aa3.45□□□□□ -1.86
HMGB3P11-201ENST00000440127 EXOC1LA0A1B0GW35 172 aa3.45□□□□□ -1.86
HMGB3P11-201ENST00000440127 TMEM120BA0PK00 339 aa3.45□□□□□ -1.86
HMGB3P11-201ENST00000440127 C17orf102A2RUQ5 167 aa3.45□□□□□ -1.86
HMGB3P11-201ENST00000440127 MBLAC1A4D2B0 266 aaPredicted RBP3.45□□□□□ -1.86
HMGB3P11-201ENST00000440127 C2CD4BA6NLJ0 364 aa3.45□□□□□ -1.86
HMGB3P11-201ENST00000440127 CCT8L1PA6NM43 557 aa3.45□□□□□ -1.86
HMGB3P11-201ENST00000440127 A8MXQ7 604 aa3.45□□□□□ -1.86
HMGB3P11-201ENST00000440127 TCP11X1B4DZS4 312 aa3.45□□□□□ -1.86
HMGB3P11-201ENST00000440127 H7C0C1 242 aa3.45□□□□□ -1.86
HMGB3P11-201ENST00000440127 PIRO00625 290 aa3.45□□□□□ -1.86
HMGB3P11-201ENST00000440127 ADAM10O14672 748 aa3.45□□□□□ -1.86
HMGB3P11-201ENST00000440127 MCF2LO15068 1137 aa3.45□□□□□ -1.86
HMGB3P11-201ENST00000440127 KRT38O76015 456 aa3.45□□□□□ -1.86
HMGB3P11-201ENST00000440127 CD48P09326 243 aa3.45□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms