RNA–Protein interactions for RNA: ENST00000440097.5

LIMD1-202, Transcript of LIM domains containing 1, humanhuman

TSL 5 BASIC

Gene LIMD1, Length 2,773 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD1-202ENST00000440097 J3QRK9 145 aa13.87□□□□□ -0.19
LIMD1-202ENST00000440097 OR4F21O95013 312 aa13.87□□□□□ -0.19
LIMD1-202ENST00000440097 ESRRBO95718 433 aa13.87□□□□□ -0.19
LIMD1-202ENST00000440097 ADH5P11766 374 aa13.87□□□□□ -0.19
LIMD1-202ENST00000440097 RPS3P23396 243 aaKnown RBP eCLIP13.87□□□□□ -0.19
LIMD1-202ENST00000440097 ST8SIA6P61647 398 aa13.87□□□□□ -0.19
LIMD1-202ENST00000440097 TRAP1Q12931 704 aaKnown RBP13.87□□□□□ -0.19
LIMD1-202ENST00000440097 GRB7Q14451 532 aa13.87□□□□□ -0.19
LIMD1-202ENST00000440097 RAB39AQ14964 217 aa13.87□□□□□ -0.19
LIMD1-202ENST00000440097 SYVN1Q86TM6 617 aa13.87□□□□□ -0.19
LIMD1-202ENST00000440097 SLC15A3Q8IY34 581 aa13.87□□□□□ -0.19
LIMD1-202ENST00000440097 CBR4Q8N4T8 237 aa13.87□□□□□ -0.19
LIMD1-202ENST00000440097 TNIP2Q8NFZ5 429 aa13.87□□□□□ -0.19
LIMD1-202ENST00000440097 OR52B6Q8NGF0 335 aa13.87□□□□□ -0.19
LIMD1-202ENST00000440097 SCAMP4Q969E2 229 aa13.87□□□□□ -0.19
LIMD1-202ENST00000440097 ZNF707Q96C28 371 aaPredicted RBP13.87□□□□□ -0.19
LIMD1-202ENST00000440097 FBXL8Q96CD0 374 aa13.87□□□□□ -0.19
LIMD1-202ENST00000440097 LRRC3BQ96PB8 259 aa13.87□□□□□ -0.19
LIMD1-202ENST00000440097 HBEGFQ99075 208 aa13.87□□□□□ -0.19
LIMD1-202ENST00000440097 TUBB1Q9H4B7 451 aa13.87□□□□□ -0.19
LIMD1-202ENST00000440097 NUDT4Q9NZJ9 180 aa13.87□□□□□ -0.19
LIMD1-202ENST00000440097 GMPR2Q9P2T1 348 aaKnown RBP13.87□□□□□ -0.19
LIMD1-202ENST00000440097 PTBP2Q9UKA9 531 aaKnown RBP13.87□□□□□ -0.19
LIMD1-202ENST00000440097 PIKFYVEQ9Y2I7 2098 aa13.87□□□□□ -0.19
LIMD1-202ENST00000440097 HTR3EA5X5Y0 456 aa13.87□□□□□ -0.19
LIMD1-202ENST00000440097 DLGAP1O14490 977 aa13.87□□□□□ -0.19
LIMD1-202ENST00000440097 TNRC18O15417 2968 aaPredicted RBP13.87□□□□□ -0.19
LIMD1-202ENST00000440097 RB1P06400 928 aa13.87□□□□□ -0.19
LIMD1-202ENST00000440097 SNRPB2P08579 225 aaKnown RBP13.87□□□□□ -0.19
LIMD1-202ENST00000440097 MYF6P23409 242 aa13.87□□□□□ -0.19
LIMD1-202ENST00000440097 HSPA7P48741 367 aa13.87□□□□□ -0.19
LIMD1-202ENST00000440097 HSPA14Q0VDF9 509 aa13.87□□□□□ -0.19
LIMD1-202ENST00000440097 CCDC92Q53HC0 331 aaPredicted RBP13.87□□□□□ -0.19
LIMD1-202ENST00000440097 BRAT1Q6PJG6 821 aa13.87□□□□□ -0.19
LIMD1-202ENST00000440097 SBSNQ6UWP8 590 aa13.87□□□□□ -0.19
LIMD1-202ENST00000440097 CANT1Q8WVQ1 401 aa13.87□□□□□ -0.19
LIMD1-202ENST00000440097 TANKQ92844 425 aa13.87□□□□□ -0.19
LIMD1-202ENST00000440097 ERLEC1Q96DZ1 483 aa13.87□□□□□ -0.19
LIMD1-202ENST00000440097 DUS3LQ96G46 650 aaKnown RBP13.87□□□□□ -0.19
LIMD1-202ENST00000440097 SLC45A3Q96JT2 553 aa13.87□□□□□ -0.19
LIMD1-202ENST00000440097 ZDHHC3Q9NYG2 299 aa13.87□□□□□ -0.19
LIMD1-202ENST00000440097 WWOXQ9NZC7 414 aa13.87□□□□□ -0.19
LIMD1-202ENST00000440097 PKD2L2Q9NZM6 624 aa13.87□□□□□ -0.19
LIMD1-202ENST00000440097 POLG2Q9UHN1 485 aa13.87□□□□□ -0.19
LIMD1-202ENST00000440097 TRBV5-4A0A0C4DH59 114 aa13.86□□□□□ -0.19
LIMD1-202ENST00000440097 C5orf67F2Z3F1 127 aa13.86□□□□□ -0.19
LIMD1-202ENST00000440097 NR5A2O00482 541 aa13.86□□□□□ -0.19
LIMD1-202ENST00000440097 E2F3O00716 465 aa13.86□□□□□ -0.19
LIMD1-202ENST00000440097 CYP17A1P05093 508 aa13.86□□□□□ -0.19
LIMD1-202ENST00000440097 C1SP09871 688 aa13.86□□□□□ -0.19
LIMD1-202ENST00000440097 ALDOCP09972 364 aaKnown RBP13.86□□□□□ -0.19
LIMD1-202ENST00000440097 DCKP27707 260 aa13.86□□□□□ -0.19
LIMD1-202ENST00000440097 NRIP1P48552 1158 aa13.86□□□□□ -0.19
LIMD1-202ENST00000440097 SPINT3P49223 89 aa13.86□□□□□ -0.19
LIMD1-202ENST00000440097 BOP1Q14137 746 aaKnown RBP13.86□□□□□ -0.19
LIMD1-202ENST00000440097 C9orf50Q5SZB4 431 aa13.86□□□□□ -0.19
LIMD1-202ENST00000440097 TMEM53Q6P2H8 277 aa13.86□□□□□ -0.19
LIMD1-202ENST00000440097 UBE2Q1Q7Z7E8 422 aa13.86□□□□□ -0.19
LIMD1-202ENST00000440097 ZNF420Q8TAQ5 688 aaPredicted RBP13.86□□□□□ -0.19
LIMD1-202ENST00000440097 MCCC1Q96RQ3 725 aaPredicted RBP13.86□□□□□ -0.19
LIMD1-202ENST00000440097 DOK1Q99704 481 aa13.86□□□□□ -0.19
LIMD1-202ENST00000440097 ADI1Q9BV57 179 aa13.86□□□□□ -0.19
LIMD1-202ENST00000440097 POLR1BQ9H9Y6 1135 aa13.86□□□□□ -0.19
LIMD1-202ENST00000440097 SPAG4Q9NPE6 437 aa13.86□□□□□ -0.19
LIMD1-202ENST00000440097 CD300AQ9UGN4 299 aa13.86□□□□□ -0.19
LIMD1-202ENST00000440097 SOBPA7XYQ1 873 aa13.86□□□□□ -0.19
LIMD1-202ENST00000440097 KPNA3O00505 521 aaPredicted RBP13.86□□□□□ -0.19
LIMD1-202ENST00000440097 CLIC3O95833 236 aa13.86□□□□□ -0.19
LIMD1-202ENST00000440097 ADH1CP00326 375 aa13.86□□□□□ -0.19
LIMD1-202ENST00000440097 BMP2P12643 396 aa13.86□□□□□ -0.19
LIMD1-202ENST00000440097 LBPP18428 481 aa13.86□□□□□ -0.19
LIMD1-202ENST00000440097 CDH3P22223 829 aa13.86□□□□□ -0.19
LIMD1-202ENST00000440097 GRIA3P42263 894 aa13.86□□□□□ -0.19
LIMD1-202ENST00000440097 BMXP51813 675 aa13.86□□□□□ -0.19
LIMD1-202ENST00000440097 HABP4Q5JVS0 413 aaKnown RBP13.86□□□□□ -0.19
LIMD1-202ENST00000440097 ANKRD26P1Q6NSI1 321 aa13.86□□□□□ -0.19
LIMD1-202ENST00000440097 MACC1Q6ZN28 852 aa13.86□□□□□ -0.19
LIMD1-202ENST00000440097 Q6ZVL8 140 aa13.86□□□□□ -0.19
LIMD1-202ENST00000440097 METTL6Q8TCB7 284 aa13.86□□□□□ -0.19
LIMD1-202ENST00000440097 CHPT1Q8WUD6 406 aa13.86□□□□□ -0.19
LIMD1-202ENST00000440097 ZMYM5Q9UJ78 669 aa13.86□□□□□ -0.19
LIMD1-202ENST00000440097 TNPO3Q9Y5L0 923 aaKnown RBP13.86□□□□□ -0.19
LIMD1-202ENST00000440097 FAM149AA5PLN7 773 aa13.85□□□□□ -0.19
LIMD1-202ENST00000440097 PABPN1LA6NDY0 278 aaKnown RBP13.85□□□□□ -0.19
LIMD1-202ENST00000440097 KLK8O60259 260 aa13.85□□□□□ -0.19
LIMD1-202ENST00000440097 OR56A5P0C7T3 313 aa13.85□□□□□ -0.19
LIMD1-202ENST00000440097 UROSP10746 265 aa13.85□□□□□ -0.19
LIMD1-202ENST00000440097 CYP2A6P11509 494 aaPredicted RBP13.85□□□□□ -0.19
LIMD1-202ENST00000440097 GDF5P43026 501 aa13.85□□□□□ -0.19
LIMD1-202ENST00000440097 MAPK10P53779 464 aa13.85□□□□□ -0.19
LIMD1-202ENST00000440097 PHKG1Q16816 387 aa13.85□□□□□ -0.19
LIMD1-202ENST00000440097 ERMP1Q7Z2K6 904 aa13.85□□□□□ -0.19
LIMD1-202ENST00000440097 DHFR2Q86XF0 187 aa13.85□□□□□ -0.19
LIMD1-202ENST00000440097 MIER2Q8N344 545 aa13.85□□□□□ -0.19
LIMD1-202ENST00000440097 VOPP1Q96AW1 172 aa13.85□□□□□ -0.19
LIMD1-202ENST00000440097 PDLIM5Q96HC4 596 aaKnown RBP13.85□□□□□ -0.19
LIMD1-202ENST00000440097 SLC25A23Q9BV35 468 aa13.85□□□□□ -0.19
LIMD1-202ENST00000440097 IL1RL2Q9HB29 575 aa13.85□□□□□ -0.19
LIMD1-202ENST00000440097 PCDH12Q9NPG4 1184 aa13.85□□□□□ -0.19
LIMD1-202ENST00000440097 IL36AQ9UHA7 158 aa13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms