RNA–Protein interactions for RNA: ENST00000439476.6

BDNF-211, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 4,532 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-211ENST00000439476 PRICKLE1Q96MT3 831 aaPredicted RBP6.27□□□□□ -1.41
BDNF-211ENST00000439476 COPS8Q99627 209 aa6.27□□□□□ -1.41
BDNF-211ENST00000439476 XYLT2Q9H1B5 865 aa6.27□□□□□ -1.41
BDNF-211ENST00000439476 ALG2Q9H553 416 aa6.27□□□□□ -1.41
BDNF-211ENST00000439476 C8orf33Q9H7E9 229 aaPredicted RBP6.27□□□□□ -1.41
BDNF-211ENST00000439476 KLHL1Q9NR64 748 aa6.27□□□□□ -1.41
BDNF-211ENST00000439476 SEMA3GQ9NS98 782 aa6.27□□□□□ -1.41
BDNF-211ENST00000439476 EXD2Q9NVH0 621 aa6.27□□□□□ -1.41
BDNF-211ENST00000439476 CPNE7Q9UBL6 633 aa6.27□□□□□ -1.41
BDNF-211ENST00000439476 PCOLCE2Q9UKZ9 415 aa6.27□□□□□ -1.41
BDNF-211ENST00000439476 OAZ3Q9UMX2 235 aa6.27□□□□□ -1.41
BDNF-211ENST00000439476 CBY1Q9Y3M2 126 aa6.27□□□□□ -1.41
BDNF-211ENST00000439476 PEX16Q9Y5Y5 336 aa6.27□□□□□ -1.41
BDNF-211ENST00000439476 AQP12BA6NM10 295 aa6.27□□□□□ -1.41
BDNF-211ENST00000439476 CLDN25C9JDP6 229 aa6.27□□□□□ -1.41
BDNF-211ENST00000439476 G3V2T6 193 aa6.27□□□□□ -1.41
BDNF-211ENST00000439476 PGRMC2O15173 223 aa6.27□□□□□ -1.41
BDNF-211ENST00000439476 TP73O15350 636 aa6.27□□□□□ -1.41
BDNF-211ENST00000439476 HTRA2O43464 458 aaPredicted RBP6.27□□□□□ -1.41
BDNF-211ENST00000439476 GREM1O60565 184 aa6.27□□□□□ -1.41
BDNF-211ENST00000439476 TNFRSF21O75509 655 aa6.27□□□□□ -1.41
BDNF-211ENST00000439476 THRBP10828 461 aa6.27□□□□□ -1.41
BDNF-211ENST00000439476 NCK1P16333 377 aa6.27□□□□□ -1.41
BDNF-211ENST00000439476 CRATP43155 626 aa6.27□□□□□ -1.41
BDNF-211ENST00000439476 GNPDA1P46926 289 aa6.27□□□□□ -1.41
BDNF-211ENST00000439476 SSTP61278 116 aa6.27□□□□□ -1.41
BDNF-211ENST00000439476 FAM46CQ5VWP2 391 aa6.27□□□□□ -1.41
BDNF-211ENST00000439476 TAPT1Q6NXT6 567 aa6.27□□□□□ -1.41
BDNF-211ENST00000439476 TMPRSS11AQ6ZMR5 421 aa6.27□□□□□ -1.41
BDNF-211ENST00000439476 MAMDC2Q7Z304 686 aaPredicted RBP6.27□□□□□ -1.41
BDNF-211ENST00000439476 KCTD20Q7Z5Y7 419 aa6.27□□□□□ -1.41
BDNF-211ENST00000439476 AQP12AQ8IXF9 295 aa6.27□□□□□ -1.41
BDNF-211ENST00000439476 ZZZ3Q8IYH5 903 aa6.27□□□□□ -1.41
BDNF-211ENST00000439476 POMGNT2Q8NAT1 580 aa6.27□□□□□ -1.41
BDNF-211ENST00000439476 MCFD2Q8NI22 146 aa6.27□□□□□ -1.41
BDNF-211ENST00000439476 STYXQ8WUJ0 223 aa6.27□□□□□ -1.41
BDNF-211ENST00000439476 PPM1MQ96MI6 270 aa6.27□□□□□ -1.41
BDNF-211ENST00000439476 NEURL2Q9BR09 285 aa6.27□□□□□ -1.41
BDNF-211ENST00000439476 C3orf14Q9HBI5 128 aa6.27□□□□□ -1.41
BDNF-211ENST00000439476 CRLF2Q9HC73 371 aa6.27□□□□□ -1.41
BDNF-211ENST00000439476 GPN1Q9HCN4 374 aaPredicted RBP6.27□□□□□ -1.41
BDNF-211ENST00000439476 SLC39A1Q9NY26 324 aa6.27□□□□□ -1.41
BDNF-211ENST00000439476 SIX4Q9UIU6 781 aa6.27□□□□□ -1.41
BDNF-211ENST00000439476 PTBP2Q9UKA9 531 aaKnown RBP6.27□□□□□ -1.41
BDNF-211ENST00000439476 ZNF214Q9UL59 606 aaPredicted RBP6.27□□□□□ -1.41
BDNF-211ENST00000439476 GTF2A1LQ9UNN4 478 aa6.27□□□□□ -1.41
BDNF-211ENST00000439476 IFT52Q9Y366 437 aa6.27□□□□□ -1.41
BDNF-211ENST00000439476 IRS2Q9Y4H2 1338 aa6.27□□□□□ -1.41
BDNF-211ENST00000439476 A0A1W2PPW3 197 aa6.26□□□□□ -1.41
BDNF-211ENST00000439476 LOC110117498-PIK3R3F6TDL0 507 aa6.26□□□□□ -1.41
BDNF-211ENST00000439476 J3QRK9 145 aa6.26□□□□□ -1.41
BDNF-211ENST00000439476 ADAMDEC1O15204 470 aa6.26□□□□□ -1.41
BDNF-211ENST00000439476 RGS10O43665 173 aa6.26□□□□□ -1.41
BDNF-211ENST00000439476 LILRB3O75022 631 aa6.26□□□□□ -1.41
BDNF-211ENST00000439476 RPP40O75818 363 aaKnown RBP6.26□□□□□ -1.41
BDNF-211ENST00000439476 CELF2O95319 508 aaKnown RBP6.26□□□□□ -1.41
BDNF-211ENST00000439476 PRG2P13727 222 aa6.26□□□□□ -1.41
BDNF-211ENST00000439476 GNALP38405 381 aa6.26□□□□□ -1.41
BDNF-211ENST00000439476 YAP1P46937 504 aaKnown RBP6.26□□□□□ -1.41
BDNF-211ENST00000439476 AP3S2P59780 193 aa6.26□□□□□ -1.41
BDNF-211ENST00000439476 HNRNPDQ14103 355 aaKnown RBP6.26□□□□□ -1.41
BDNF-211ENST00000439476 ACOX1Q15067 660 aa6.26□□□□□ -1.41
BDNF-211ENST00000439476 TEAD4Q15561 434 aa6.26□□□□□ -1.41
BDNF-211ENST00000439476 HKDC1Q2TB90 917 aa6.26□□□□□ -1.41
BDNF-211ENST00000439476 PLET1Q6UQ28 207 aa6.26□□□□□ -1.41
BDNF-211ENST00000439476 UGT2A3Q6UWM9 527 aa6.26□□□□□ -1.41
BDNF-211ENST00000439476 LDB1Q86U70 411 aaPredicted RBP6.26□□□□□ -1.41
BDNF-211ENST00000439476 ZC3HC1Q86WB0 502 aaKnown RBP6.26□□□□□ -1.41
BDNF-211ENST00000439476 GPC2Q8N158 579 aa6.26□□□□□ -1.41
BDNF-211ENST00000439476 GRPEL2Q8TAA5 225 aa6.26□□□□□ -1.41
BDNF-211ENST00000439476 RAB2BQ8WUD1 216 aa6.26□□□□□ -1.41
BDNF-211ENST00000439476 PIK3R3Q92569 461 aa6.26□□□□□ -1.41
BDNF-211ENST00000439476 TP53INP1Q96A56 240 aa6.26□□□□□ -1.41
BDNF-211ENST00000439476 FBXL8Q96CD0 374 aa6.26□□□□□ -1.41
BDNF-211ENST00000439476 MOCOSQ96EN8 888 aa6.26□□□□□ -1.41
BDNF-211ENST00000439476 CNDP2Q96KP4 475 aaKnown RBP6.26□□□□□ -1.41
BDNF-211ENST00000439476 PANX1Q96RD7 426 aa6.26□□□□□ -1.41
BDNF-211ENST00000439476 SEC22CQ9BRL7 303 aa6.26□□□□□ -1.41
BDNF-211ENST00000439476 MCCC2Q9HCC0 563 aa6.26□□□□□ -1.41
BDNF-211ENST00000439476 CD93Q9NPY3 652 aa6.26□□□□□ -1.41
BDNF-211ENST00000439476 POLR3BQ9NW08 1133 aaPredicted RBP6.26□□□□□ -1.41
BDNF-211ENST00000439476 CALML5Q9NZT1 146 aa6.26□□□□□ -1.41
BDNF-211ENST00000439476 CNTN3Q9P232 1028 aa6.26□□□□□ -1.41
BDNF-211ENST00000439476 PTGFRNQ9P2B2 879 aa6.26□□□□□ -1.41
BDNF-211ENST00000439476 GULP1Q9UBP9 304 aa6.26□□□□□ -1.41
BDNF-211ENST00000439476 MRPS33Q9Y291 106 aaKnown RBP6.26□□□□□ -1.41
BDNF-211ENST00000439476 MAN2B2Q9Y2E5 1009 aa6.26□□□□□ -1.41
BDNF-211ENST00000439476 TCAF1Q9Y4C2 921 aa6.26□□□□□ -1.41
BDNF-211ENST00000439476 TRAV19A0A0A6YYK7 116 aa6.26□□□□□ -1.41
BDNF-211ENST00000439476 LOC100506127A0A0U1RQW1 187 aa6.26□□□□□ -1.41
BDNF-211ENST00000439476 FAM86C2PA6NEL3 165 aa6.26□□□□□ -1.41
BDNF-211ENST00000439476 TSC22D2O75157 780 aa6.26□□□□□ -1.41
BDNF-211ENST00000439476 FGBP02675 491 aa6.26□□□□□ -1.41
BDNF-211ENST00000439476 PIRTP0C851 137 aa6.26□□□□□ -1.41
BDNF-211ENST00000439476 TNNI3P19429 210 aa6.26□□□□□ -1.41
BDNF-211ENST00000439476 S100GP29377 79 aa6.26□□□□□ -1.41
BDNF-211ENST00000439476 SDC2P34741 201 aa6.26□□□□□ -1.41
BDNF-211ENST00000439476 PPM1AP35813 382 aa6.26□□□□□ -1.41
BDNF-211ENST00000439476 NDUFV1P49821 464 aa6.26□□□□□ -1.41
BDNF-211ENST00000439476 ETV1P50549 477 aa6.26□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms