RNA–Protein interactions for RNA: ENST00000439120.1

AC004540.1-201, humanhuman

TSL 2 BASIC

Gene AC004540.1, Length 891 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004540.1-201ENST00000439120 GRIA1P42261 906 aa17.85■□□□□ 0.45
AC004540.1-201ENST00000439120 PGDP52209 483 aa17.85■□□□□ 0.45
AC004540.1-201ENST00000439120 FOXK1P85037 733 aa17.85■□□□□ 0.45
AC004540.1-201ENST00000439120 UNC5AQ6ZN44 842 aa17.85■□□□□ 0.45
AC004540.1-201ENST00000439120 CDHR3Q6ZTQ4 885 aa17.85■□□□□ 0.45
AC004540.1-201ENST00000439120 TRIM73Q86UV7 250 aa17.85■□□□□ 0.45
AC004540.1-201ENST00000439120 OR5K2Q8NHB8 316 aa17.85■□□□□ 0.45
AC004540.1-201ENST00000439120 TCTN2Q96GX1 697 aa17.85■□□□□ 0.45
AC004540.1-201ENST00000439120 DPH2Q9BQC3 489 aaPredicted RBP17.85■□□□□ 0.45
AC004540.1-201ENST00000439120 TRIM55Q9BYV6 548 aa17.85■□□□□ 0.45
AC004540.1-201ENST00000439120 PCMTD2Q9NV79 361 aa17.85■□□□□ 0.45
AC004540.1-201ENST00000439120 IRAK4Q9NWZ3 460 aa17.85■□□□□ 0.45
AC004540.1-201ENST00000439120 OR6C2Q9NZP2 312 aa17.85■□□□□ 0.45
AC004540.1-201ENST00000439120 TCFL5Q9UL49 500 aa17.85■□□□□ 0.45
AC004540.1-201ENST00000439120 G3BP2Q9UN86 482 aaKnown RBP17.85■□□□□ 0.45
AC004540.1-201ENST00000439120 TCAF1Q9Y4C2 921 aa17.85■□□□□ 0.45
AC004540.1-201ENST00000439120 SLC5A10A0PJK1 596 aa17.84■□□□□ 0.45
AC004540.1-201ENST00000439120 K7EM74 188 aa17.84■□□□□ 0.45
AC004540.1-201ENST00000439120 ZNF749O43361 778 aa17.84■□□□□ 0.45
AC004540.1-201ENST00000439120 RPN2P04844 631 aa17.84■□□□□ 0.45
AC004540.1-201ENST00000439120 CHRM5P08912 532 aaPredicted RBP17.84■□□□□ 0.45
AC004540.1-201ENST00000439120 ETS1P14921 441 aa17.84■□□□□ 0.45
AC004540.1-201ENST00000439120 ACADLP28330 430 aa17.84■□□□□ 0.45
AC004540.1-201ENST00000439120 CCL11P51671 97 aa17.84■□□□□ 0.45
AC004540.1-201ENST00000439120 HSPA14Q0VDF9 509 aa17.84■□□□□ 0.45
AC004540.1-201ENST00000439120 CHAF1BQ13112 559 aa17.84■□□□□ 0.45
AC004540.1-201ENST00000439120 IGFBP7Q16270 282 aa17.84■□□□□ 0.45
AC004540.1-201ENST00000439120 PTCHD3Q3KNS1 767 aa17.84■□□□□ 0.45
AC004540.1-201ENST00000439120 CPZQ66K79 652 aa17.84■□□□□ 0.45
AC004540.1-201ENST00000439120 GSTA5Q7RTV2 222 aa17.84■□□□□ 0.45
AC004540.1-201ENST00000439120 PRUNE1Q86TP1 453 aa17.84■□□□□ 0.45
AC004540.1-201ENST00000439120 SLC25A23Q9BV35 468 aa17.84■□□□□ 0.45
AC004540.1-201ENST00000439120 ING2Q9H160 280 aa17.84■□□□□ 0.45
AC004540.1-201ENST00000439120 CASS4Q9NQ75 786 aa17.84■□□□□ 0.45
AC004540.1-201ENST00000439120 PADI2Q9Y2J8 665 aa17.84■□□□□ 0.45
AC004540.1-201ENST00000439120 A0A0J9YY10 115 aa17.83■□□□□ 0.44
AC004540.1-201ENST00000439120 ISM1B1AKI9 464 aa17.83■□□□□ 0.44
AC004540.1-201ENST00000439120 BHMG1C9JSJ3 638 aaPredicted RBP17.83■□□□□ 0.44
AC004540.1-201ENST00000439120 OR2B3O76000 313 aa17.83■□□□□ 0.44
AC004540.1-201ENST00000439120 APOA4P06727 396 aa17.83■□□□□ 0.44
AC004540.1-201ENST00000439120 PTGIRP43119 386 aa17.83■□□□□ 0.44
AC004540.1-201ENST00000439120 ACVR1Q04771 509 aa17.83■□□□□ 0.44
AC004540.1-201ENST00000439120 TMED2Q15363 201 aa17.83■□□□□ 0.44
AC004540.1-201ENST00000439120 DEFB110Q30KQ9 67 aa17.83■□□□□ 0.44
AC004540.1-201ENST00000439120 DNAJC21Q5F1R6 531 aaKnown RBP17.83■□□□□ 0.44
AC004540.1-201ENST00000439120 ZNF789Q5FWF6 425 aa17.83■□□□□ 0.44
AC004540.1-201ENST00000439120 MEI1Q5TIA1 1274 aa17.83■□□□□ 0.44
AC004540.1-201ENST00000439120 LCN10Q6JVE6 187 aa17.83■□□□□ 0.44
AC004540.1-201ENST00000439120 ATCAYQ86WG3 371 aa17.83■□□□□ 0.44
AC004540.1-201ENST00000439120 GSDMBQ8TAX9 411 aa17.83■□□□□ 0.44
AC004540.1-201ENST00000439120 ASZ1Q8WWH4 475 aa17.83■□□□□ 0.44
AC004540.1-201ENST00000439120 PEX13Q92968 403 aa17.83■□□□□ 0.44
AC004540.1-201ENST00000439120 ZNF778Q96MU6 729 aa17.83■□□□□ 0.44
AC004540.1-201ENST00000439120 OR2A14Q96R47 310 aa17.83■□□□□ 0.44
AC004540.1-201ENST00000439120 C17orf62Q9BQA9 187 aa17.83■□□□□ 0.44
AC004540.1-201ENST00000439120 CATSPERZQ9NTU4 200 aa17.83■□□□□ 0.44
AC004540.1-201ENST00000439120 GPN3Q9UHW5 284 aaPredicted RBP17.83■□□□□ 0.44
AC004540.1-201ENST00000439120 PLAGL1Q9UM63 463 aa17.83■□□□□ 0.44
AC004540.1-201ENST00000439120 AP1M2Q9Y6Q5 423 aa17.83■□□□□ 0.44
AC004540.1-201ENST00000439120 UBR5O95071 2799 aaPredicted RBP17.83■□□□□ 0.44
AC004540.1-201ENST00000439120 AP3B1O00203 1094 aa17.82■□□□□ 0.44
AC004540.1-201ENST00000439120 TMEM63AO94886 807 aa17.82■□□□□ 0.44
AC004540.1-201ENST00000439120 TTPAP49638 278 aa17.82■□□□□ 0.44
AC004540.1-201ENST00000439120 SESN2P58004 480 aaPredicted RBP17.82■□□□□ 0.44
AC004540.1-201ENST00000439120 BASP1P80723 227 aaKnown RBP17.82■□□□□ 0.44
AC004540.1-201ENST00000439120 KIR2DS3Q14952 304 aa17.82■□□□□ 0.44
AC004540.1-201ENST00000439120 NCF4Q15080 339 aa17.82■□□□□ 0.44
AC004540.1-201ENST00000439120 CCNG2Q16589 344 aa17.82■□□□□ 0.44
AC004540.1-201ENST00000439120 PCID2Q5JVF3 399 aa17.82■□□□□ 0.44
AC004540.1-201ENST00000439120 FAM198BQ6UWH4 519 aa17.82■□□□□ 0.44
AC004540.1-201ENST00000439120 C4orf22Q6V702 233 aa17.82■□□□□ 0.44
AC004540.1-201ENST00000439120 ZNF534Q76KX8 674 aa17.82■□□□□ 0.44
AC004540.1-201ENST00000439120 SLC22A15Q8IZD6 547 aa17.82■□□□□ 0.44
AC004540.1-201ENST00000439120 CFAP61Q8NHU2 1237 aa17.82■□□□□ 0.44
AC004540.1-201ENST00000439120 MAIP1Q8WWC4 291 aa17.82■□□□□ 0.44
AC004540.1-201ENST00000439120 CARD6Q9BX69 1037 aa17.82■□□□□ 0.44
AC004540.1-201ENST00000439120 LZTFL1Q9NQ48 299 aa17.82■□□□□ 0.44
AC004540.1-201ENST00000439120 SPHK1Q9NYA1 384 aa17.82■□□□□ 0.44
AC004540.1-201ENST00000439120 ZSCAN5DPP0CG00 497 aa17.81■□□□□ 0.44
AC004540.1-201ENST00000439120 ATXN8OSP0DMR3 200 aa17.81■□□□□ 0.44
AC004540.1-201ENST00000439120 CCR7P32248 378 aa17.81■□□□□ 0.44
AC004540.1-201ENST00000439120 RPL22P35268 128 aaKnown RBP17.81■□□□□ 0.44
AC004540.1-201ENST00000439120 RRADP55042 308 aa17.81■□□□□ 0.44
AC004540.1-201ENST00000439120 SLC5A12Q1EHB4 618 aa17.81■□□□□ 0.44
AC004540.1-201ENST00000439120 FAM69BQ5VUD6 431 aa17.81■□□□□ 0.44
AC004540.1-201ENST00000439120 PTRHD1Q6GMV3 140 aaKnown RBP17.81■□□□□ 0.44
AC004540.1-201ENST00000439120 RAB43Q86YS6 212 aa17.81■□□□□ 0.44
AC004540.1-201ENST00000439120 OTUD6BQ8N6M0 293 aa17.81■□□□□ 0.44
AC004540.1-201ENST00000439120 GLIS1Q8NBF1 620 aa17.81■□□□□ 0.44
AC004540.1-201ENST00000439120 SGSM3Q96HU1 749 aa17.81■□□□□ 0.44
AC004540.1-201ENST00000439120 DHRS4Q9BTZ2 278 aa17.81■□□□□ 0.44
AC004540.1-201ENST00000439120 AP1M1Q9BXS5 423 aa17.81■□□□□ 0.44
AC004540.1-201ENST00000439120 FAM60AQ9NP50 221 aa17.81■□□□□ 0.44
AC004540.1-201ENST00000439120 EIF2B3Q9NR50 452 aaKnown RBP17.81■□□□□ 0.44
AC004540.1-201ENST00000439120 CHRAC1Q9NRG0 131 aa17.81■□□□□ 0.44
AC004540.1-201ENST00000439120 TXLNGQ9NUQ3 528 aa17.81■□□□□ 0.44
AC004540.1-201ENST00000439120 PLAAQ9Y263 795 aa17.81■□□□□ 0.44
AC004540.1-201ENST00000439120 PCDHGA9Q9Y5G4 932 aaKnown RBP17.81■□□□□ 0.44
AC004540.1-201ENST00000439120 SPTBP11277 2137 aa17.8■□□□□ 0.44
AC004540.1-201ENST00000439120 IQCF5A8MTL0 148 aa17.8■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms