RNA–Protein interactions for RNA: ENST00000438964.6

ACTN1-204, Transcript of actinin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene ACTN1, Length 3,043 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-204ENST00000438964 DNAJB3Q8WWF6 145 aa13.12□□□□□ -0.31
ACTN1-204ENST00000438964 SEMA3CQ99985 751 aa13.12□□□□□ -0.31
ACTN1-204ENST00000438964 NFKBIZQ9BYH8 718 aa13.12□□□□□ -0.31
ACTN1-204ENST00000438964 CNGB3Q9NQW8 809 aa13.12□□□□□ -0.31
ACTN1-204ENST00000438964 SIRT5Q9NXA8 310 aa13.12□□□□□ -0.31
ACTN1-204ENST00000438964 CDH9Q9ULB4 789 aa13.12□□□□□ -0.31
ACTN1-204ENST00000438964 MED16Q9Y2X0 877 aa13.12□□□□□ -0.31
ACTN1-204ENST00000438964 PABPN1LA6NDY0 278 aaKnown RBP13.12□□□□□ -0.31
ACTN1-204ENST00000438964 PER2O15055 1255 aa13.12□□□□□ -0.31
ACTN1-204ENST00000438964 WISP3O95389 354 aaPredicted RBP13.12□□□□□ -0.31
ACTN1-204ENST00000438964 CSF2P04141 144 aa13.12□□□□□ -0.31
ACTN1-204ENST00000438964 MMP2P08253 660 aa13.12□□□□□ -0.31
ACTN1-204ENST00000438964 HCAR3P49019 387 aa13.12□□□□□ -0.31
ACTN1-204ENST00000438964 CD83Q01151 205 aa13.12□□□□□ -0.31
ACTN1-204ENST00000438964 ZNF484Q5JVG2 852 aa13.12□□□□□ -0.31
ACTN1-204ENST00000438964 NOTUMQ6P988 496 aa13.12□□□□□ -0.31
ACTN1-204ENST00000438964 ADHFE1Q8IWW8 467 aa13.12□□□□□ -0.31
ACTN1-204ENST00000438964 TRIM48Q8IWZ4 208 aa13.12□□□□□ -0.31
ACTN1-204ENST00000438964 PJA1Q8NG27 643 aa13.12□□□□□ -0.31
ACTN1-204ENST00000438964 TRPM4Q8TD43 1214 aa13.12□□□□□ -0.31
ACTN1-204ENST00000438964 SLC13A3Q8WWT9 602 aa13.12□□□□□ -0.31
ACTN1-204ENST00000438964 DPH2Q9BQC3 489 aaPredicted RBP13.12□□□□□ -0.31
ACTN1-204ENST00000438964 INPP5KQ9BT40 448 aa13.12□□□□□ -0.31
ACTN1-204ENST00000438964 CDADC1Q9BWV3 514 aa13.12□□□□□ -0.31
ACTN1-204ENST00000438964 HACD3Q9P035 362 aa13.12□□□□□ -0.31
ACTN1-204ENST00000438964 TPRKBQ9Y3C4 175 aa13.12□□□□□ -0.31
ACTN1-204ENST00000438964 MUSKO15146 869 aa13.11□□□□□ -0.31
ACTN1-204ENST00000438964 FHP07954 510 aa13.11□□□□□ -0.31
ACTN1-204ENST00000438964 UROSP10746 265 aa13.11□□□□□ -0.31
ACTN1-204ENST00000438964 DNAJB1P25685 340 aa13.11□□□□□ -0.31
ACTN1-204ENST00000438964 IDH2P48735 452 aaKnown RBP13.11□□□□□ -0.31
ACTN1-204ENST00000438964 SNRPD2P62316 118 aaKnown RBP13.11□□□□□ -0.31
ACTN1-204ENST00000438964 ZXDBP98169 803 aa13.11□□□□□ -0.31
ACTN1-204ENST00000438964 SV2CQ496J9 727 aa13.11□□□□□ -0.31
ACTN1-204ENST00000438964 XKR7Q5GH72 579 aa13.11□□□□□ -0.31
ACTN1-204ENST00000438964 MARC1Q5VT66 337 aa13.11□□□□□ -0.31
ACTN1-204ENST00000438964 OR5K1Q8NHB7 308 aa13.11□□□□□ -0.31
ACTN1-204ENST00000438964 GIPC2Q8TF65 315 aa13.11□□□□□ -0.31
ACTN1-204ENST00000438964 TSGA13Q96PP4 275 aa13.11□□□□□ -0.31
ACTN1-204ENST00000438964 CATSPERZQ9NTU4 200 aa13.11□□□□□ -0.31
ACTN1-204ENST00000438964 TMLHEQ9NVH6 421 aa13.11□□□□□ -0.31
ACTN1-204ENST00000438964 SLC6A14Q9UN76 642 aa13.11□□□□□ -0.31
ACTN1-204ENST00000438964 RNF6Q9Y252 685 aa13.11□□□□□ -0.31
ACTN1-204ENST00000438964 METTL15A6NJ78 407 aa13.11□□□□□ -0.31
ACTN1-204ENST00000438964 E9PAM4 449 aa13.11□□□□□ -0.31
ACTN1-204ENST00000438964 F8W810 466 aa13.11□□□□□ -0.31
ACTN1-204ENST00000438964 M0R082 166 aa13.11□□□□□ -0.31
ACTN1-204ENST00000438964 ZW10O43264 779 aa13.11□□□□□ -0.31
ACTN1-204ENST00000438964 PTPN2P17706 415 aa13.11□□□□□ -0.31
ACTN1-204ENST00000438964 NFKB2Q00653 900 aa13.11□□□□□ -0.31
ACTN1-204ENST00000438964 PWP1Q13610 501 aa13.11□□□□□ -0.31
ACTN1-204ENST00000438964 SLC14A2Q15849 920 aa13.11□□□□□ -0.31
ACTN1-204ENST00000438964 TBRG1Q3YBR2 411 aa13.11□□□□□ -0.31
ACTN1-204ENST00000438964 SYT6Q5T7P8 510 aaPredicted RBP13.11□□□□□ -0.31
ACTN1-204ENST00000438964 TWF2Q6IBS0 349 aaKnown RBP13.11□□□□□ -0.31
ACTN1-204ENST00000438964 OR4F6Q8NGB9 312 aa13.11□□□□□ -0.31
ACTN1-204ENST00000438964 CDC26Q8NHZ8 85 aa13.11□□□□□ -0.31
ACTN1-204ENST00000438964 MYLPFQ96A32 169 aa13.11□□□□□ -0.31
ACTN1-204ENST00000438964 LINGO1Q96FE5 620 aa13.11□□□□□ -0.31
ACTN1-204ENST00000438964 BRINP2Q9C0B6 783 aa13.11□□□□□ -0.31
ACTN1-204ENST00000438964 MUC13Q9H3R2 512 aa13.11□□□□□ -0.31
ACTN1-204ENST00000438964 MFSD1Q9H3U5 465 aa13.11□□□□□ -0.31
ACTN1-204ENST00000438964 SP140LQ9H930 580 aa13.11□□□□□ -0.31
ACTN1-204ENST00000438964 RANGRFQ9HD47 186 aaPredicted RBP13.11□□□□□ -0.31
ACTN1-204ENST00000438964 PRM3Q9NNZ6 103 aa13.11□□□□□ -0.31
ACTN1-204ENST00000438964 GPR83Q9NYM4 423 aa13.11□□□□□ -0.31
ACTN1-204ENST00000438964 PCDHGB6Q9Y5F9 930 aa13.11□□□□□ -0.31
ACTN1-204ENST00000438964 GOLGA4Q13439 2230 aaKnown RBP13.11□□□□□ -0.31
ACTN1-204ENST00000438964 NINQ8N4C6 2090 aa13.11□□□□□ -0.31
ACTN1-204ENST00000438964 KERAO60938 352 aa13.1□□□□□ -0.31
ACTN1-204ENST00000438964 FKBP9O95302 570 aa13.1□□□□□ -0.31
ACTN1-204ENST00000438964 TBX18O95935 607 aa13.1□□□□□ -0.31
ACTN1-204ENST00000438964 OR4Q2P0C623 313 aa13.1□□□□□ -0.31
ACTN1-204ENST00000438964 CCDC159P0C7I6 412 aa13.1□□□□□ -0.31
ACTN1-204ENST00000438964 PRR35P0CG20 571 aa13.1□□□□□ -0.31
ACTN1-204ENST00000438964 SCNN1GP51170 649 aa13.1□□□□□ -0.31
ACTN1-204ENST00000438964 GALK2Q01415 458 aa13.1□□□□□ -0.31
ACTN1-204ENST00000438964 TIGD6Q17RP2 521 aa13.1□□□□□ -0.31
ACTN1-204ENST00000438964 SMU1Q2TAY7 513 aa13.1□□□□□ -0.31
ACTN1-204ENST00000438964 DCAF4L1Q3SXM0 396 aa13.1□□□□□ -0.31
ACTN1-204ENST00000438964 TRIM60Q495X7 471 aa13.1□□□□□ -0.31
ACTN1-204ENST00000438964 CYP27C1Q4G0S4 372 aa13.1□□□□□ -0.31
ACTN1-204ENST00000438964 RUNDC3AQ59EK9 446 aa13.1□□□□□ -0.31
ACTN1-204ENST00000438964 INTS6LQ5JSJ4 861 aaKnown RBP13.1□□□□□ -0.31
ACTN1-204ENST00000438964 AGAP6Q5VW22 663 aa13.1□□□□□ -0.31
ACTN1-204ENST00000438964 TRAF7Q6Q0C0 670 aa13.1□□□□□ -0.31
ACTN1-204ENST00000438964 LIX1Q8N485 282 aa13.1□□□□□ -0.31
ACTN1-204ENST00000438964 OR4L1Q8NH43 312 aa13.1□□□□□ -0.31
ACTN1-204ENST00000438964 OR52J3Q8NH60 311 aa13.1□□□□□ -0.31
ACTN1-204ENST00000438964 GTF2H4Q92759 462 aa13.1□□□□□ -0.31
ACTN1-204ENST00000438964 FAM120BQ96EK7 910 aaKnown RBP13.1□□□□□ -0.31
ACTN1-204ENST00000438964 TPD52L3Q96J77 140 aa13.1□□□□□ -0.31
ACTN1-204ENST00000438964 AGAP4Q96P64 663 aa13.1□□□□□ -0.31
ACTN1-204ENST00000438964 C16orf70Q9BSU1 422 aa13.1□□□□□ -0.31
ACTN1-204ENST00000438964 APOL5Q9BWW9 433 aa13.1□□□□□ -0.31
ACTN1-204ENST00000438964 ELP3Q9H9T3 547 aa13.1□□□□□ -0.31
ACTN1-204ENST00000438964 HS3ST4Q9Y661 456 aa13.1□□□□□ -0.31
ACTN1-204ENST00000438964 SLC7A4O43246 635 aa13.1□□□□□ -0.31
ACTN1-204ENST00000438964 ICMTO60725 284 aa13.1□□□□□ -0.31
ACTN1-204ENST00000438964 CPNE3O75131 537 aaKnown RBP13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms