RNA–Protein interactions for RNA: ENST00000438773.2

TRAPPC9-202, Transcript of trafficking protein particle complex 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAPPC9, Length 4,297 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-202ENST00000438773 ATP6V1G1O75348 118 aa11.34□□□□□ -0.59
TRAPPC9-202ENST00000438773 GSRP00390 522 aa11.34□□□□□ -0.59
TRAPPC9-202ENST00000438773 IFNA14P01570 189 aa11.34□□□□□ -0.59
TRAPPC9-202ENST00000438773 KIR3DL1P43629 444 aa11.34□□□□□ -0.59
TRAPPC9-202ENST00000438773 ANXA11P50995 505 aaKnown RBP11.34□□□□□ -0.59
TRAPPC9-202ENST00000438773 RAD23AP54725 363 aa11.34□□□□□ -0.59
TRAPPC9-202ENST00000438773 CDH15P55291 814 aa11.34□□□□□ -0.59
TRAPPC9-202ENST00000438773 ERVFC1P60507 584 aa11.34□□□□□ -0.59
TRAPPC9-202ENST00000438773 IL5RAQ01344 420 aa11.34□□□□□ -0.59
TRAPPC9-202ENST00000438773 TRIM25Q14258 630 aaKnown RBP11.34□□□□□ -0.59
TRAPPC9-202ENST00000438773 GAREM2Q75VX8 874 aa11.34□□□□□ -0.59
TRAPPC9-202ENST00000438773 LIMS2Q7Z4I7 341 aa11.34□□□□□ -0.59
TRAPPC9-202ENST00000438773 P3H2Q8IVL5 708 aa11.34□□□□□ -0.59
TRAPPC9-202ENST00000438773 HERVK_113Q902F9 699 aa11.34□□□□□ -0.59
TRAPPC9-202ENST00000438773 RAD51AP1Q96B01 352 aa11.34□□□□□ -0.59
TRAPPC9-202ENST00000438773 NKX2-4Q9H2Z4 354 aa11.34□□□□□ -0.59
TRAPPC9-202ENST00000438773 PAK6Q9NQU5 681 aaPredicted RBP11.34□□□□□ -0.59
TRAPPC9-202ENST00000438773 TREX1Q9NSU2 369 aa11.34□□□□□ -0.59
TRAPPC9-202ENST00000438773 CACNA2D2Q9NY47 1150 aa11.34□□□□□ -0.59
TRAPPC9-202ENST00000438773 EMCNQ9ULC0 261 aa11.34□□□□□ -0.59
TRAPPC9-202ENST00000438773 AP3M1Q9Y2T2 418 aa11.34□□□□□ -0.59
TRAPPC9-202ENST00000438773 HEPACAM2A8MVW5 462 aa11.34□□□□□ -0.59
TRAPPC9-202ENST00000438773 RECQL5O94762 991 aaPredicted RBP11.34□□□□□ -0.59
TRAPPC9-202ENST00000438773 ABLIM3O94929 683 aa11.34□□□□□ -0.59
TRAPPC9-202ENST00000438773 MFN2O95140 757 aa11.34□□□□□ -0.59
TRAPPC9-202ENST00000438773 APOA1P02647 267 aa11.34□□□□□ -0.59
TRAPPC9-202ENST00000438773 HMGA1P17096 107 aaKnown RBP11.34□□□□□ -0.59
TRAPPC9-202ENST00000438773 ITGAXP20702 1163 aa11.34□□□□□ -0.59
TRAPPC9-202ENST00000438773 KCNA5P22460 613 aa11.34□□□□□ -0.59
TRAPPC9-202ENST00000438773 POU1F1P28069 291 aa11.34□□□□□ -0.59
TRAPPC9-202ENST00000438773 CRATP43155 626 aa11.34□□□□□ -0.59
TRAPPC9-202ENST00000438773 ZDHHC13Q8IUH4 622 aa11.34□□□□□ -0.59
TRAPPC9-202ENST00000438773 CHST14Q8NCH0 376 aa11.34□□□□□ -0.59
TRAPPC9-202ENST00000438773 ZNF514Q96K75 400 aaPredicted RBP11.34□□□□□ -0.59
TRAPPC9-202ENST00000438773 NDEL1Q9GZM8 345 aa11.34□□□□□ -0.59
TRAPPC9-202ENST00000438773 MTG2Q9H4K7 406 aa11.34□□□□□ -0.59
TRAPPC9-202ENST00000438773 IL17CQ9P0M4 197 aa11.34□□□□□ -0.59
TRAPPC9-202ENST00000438773 DYTNA2CJ06 578 aa11.33□□□□□ -0.6
TRAPPC9-202ENST00000438773 FOXD2O60548 495 aaPredicted RBP11.33□□□□□ -0.6
TRAPPC9-202ENST00000438773 KELP23276 732 aa11.33□□□□□ -0.6
TRAPPC9-202ENST00000438773 ETV3P41162 512 aa11.33□□□□□ -0.6
TRAPPC9-202ENST00000438773 ERVK-8P63133 956 aa11.33□□□□□ -0.6
TRAPPC9-202ENST00000438773 ZNF805Q5CZA5 627 aa11.33□□□□□ -0.6
TRAPPC9-202ENST00000438773 PDE12Q6L8Q7 609 aaKnown RBP11.33□□□□□ -0.6
TRAPPC9-202ENST00000438773 HTR3DQ70Z44 454 aa11.33□□□□□ -0.6
TRAPPC9-202ENST00000438773 TRIM74Q86UV6 250 aa11.33□□□□□ -0.6
TRAPPC9-202ENST00000438773 AMZ2Q86W34 360 aa11.33□□□□□ -0.6
TRAPPC9-202ENST00000438773 PIANPQ8IYJ0 282 aa11.33□□□□□ -0.6
TRAPPC9-202ENST00000438773 OFCC1Q8IZS5 231 aa11.33□□□□□ -0.6
TRAPPC9-202ENST00000438773 ZCCHC7Q8N3Z6 543 aaKnown RBP11.33□□□□□ -0.6
TRAPPC9-202ENST00000438773 OR13J1Q8NGT2 312 aa11.33□□□□□ -0.6
TRAPPC9-202ENST00000438773 SMARCD2Q92925 531 aa11.33□□□□□ -0.6
TRAPPC9-202ENST00000438773 ITCHQ96J02 903 aa11.33□□□□□ -0.6
TRAPPC9-202ENST00000438773 C9orf16Q9BUW7 83 aa11.33□□□□□ -0.6
TRAPPC9-202ENST00000438773 C1orf109Q9NX04 203 aa11.33□□□□□ -0.6
TRAPPC9-202ENST00000438773 C6orf203Q9P0P8 240 aaPredicted RBP11.33□□□□□ -0.6
TRAPPC9-202ENST00000438773 MAPRE3Q9UPY8 281 aa11.33□□□□□ -0.6
TRAPPC9-202ENST00000438773 SLC22A14Q9Y267 594 aa11.33□□□□□ -0.6
TRAPPC9-202ENST00000438773 COMMD3-BMI1R4GMX3 469 aa11.33□□□□□ -0.6
TRAPPC9-202ENST00000438773 I6L893 689 aaPredicted RBP11.33□□□□□ -0.6
TRAPPC9-202ENST00000438773 TULP3O75386 442 aa11.33□□□□□ -0.6
TRAPPC9-202ENST00000438773 IGLV3-25P01717 112 aa11.33□□□□□ -0.6
TRAPPC9-202ENST00000438773 PABPC4LP0CB38 370 aaKnown RBP11.33□□□□□ -0.6
TRAPPC9-202ENST00000438773 IDSP22304 550 aa11.33□□□□□ -0.6
TRAPPC9-202ENST00000438773 ARF5P84085 180 aa11.33□□□□□ -0.6
TRAPPC9-202ENST00000438773 CYP20A1Q6UW02 462 aa11.33□□□□□ -0.6
TRAPPC9-202ENST00000438773 ISCA2Q86U28 154 aa11.33□□□□□ -0.6
TRAPPC9-202ENST00000438773 OR2T12Q8NG77 320 aa11.33□□□□□ -0.6
TRAPPC9-202ENST00000438773 OR4F6Q8NGB9 312 aa11.33□□□□□ -0.6
TRAPPC9-202ENST00000438773 RHEBL1Q8TAI7 183 aa11.33□□□□□ -0.6
TRAPPC9-202ENST00000438773 MYRFLQ96LU7 910 aa11.33□□□□□ -0.6
TRAPPC9-202ENST00000438773 TEX12Q9BXU0 123 aa11.33□□□□□ -0.6
TRAPPC9-202ENST00000438773 CCDC177Q9NQR7 707 aaPredicted RBP11.33□□□□□ -0.6
TRAPPC9-202ENST00000438773 UBAP1Q9NZ09 502 aa11.33□□□□□ -0.6
TRAPPC9-202ENST00000438773 A0A1B0GTW7 788 aa11.33□□□□□ -0.6
TRAPPC9-202ENST00000438773 G3V2L1 256 aa11.33□□□□□ -0.6
TRAPPC9-202ENST00000438773 F11P03951 625 aa11.33□□□□□ -0.6
TRAPPC9-202ENST00000438773 BPIP17213 487 aa11.33□□□□□ -0.6
TRAPPC9-202ENST00000438773 FDXRP22570 491 aa11.33□□□□□ -0.6
TRAPPC9-202ENST00000438773 CTSOP43234 321 aaPredicted RBP11.33□□□□□ -0.6
TRAPPC9-202ENST00000438773 PRKAG1P54619 331 aa11.33□□□□□ -0.6
TRAPPC9-202ENST00000438773 PTCHD3Q3KNS1 767 aa11.33□□□□□ -0.6
TRAPPC9-202ENST00000438773 MPP7Q5T2T1 576 aa11.33□□□□□ -0.6
TRAPPC9-202ENST00000438773 GALNT13Q8IUC8 556 aa11.33□□□□□ -0.6
TRAPPC9-202ENST00000438773 PGBD5Q8N414 524 aa11.33□□□□□ -0.6
TRAPPC9-202ENST00000438773 LIX1Q8N485 282 aa11.33□□□□□ -0.6
TRAPPC9-202ENST00000438773 NCSTNQ92542 709 aa11.33□□□□□ -0.6
TRAPPC9-202ENST00000438773 PRICKLE1Q96MT3 831 aaPredicted RBP11.33□□□□□ -0.6
TRAPPC9-202ENST00000438773 SLC2A11Q9BYW1 496 aa11.33□□□□□ -0.6
TRAPPC9-202ENST00000438773 SLC32A1Q9H598 525 aa11.33□□□□□ -0.6
TRAPPC9-202ENST00000438773 CWH43Q9H720 699 aa11.33□□□□□ -0.6
TRAPPC9-202ENST00000438773 SFXN1Q9H9B4 322 aa11.33□□□□□ -0.6
TRAPPC9-202ENST00000438773 NDRG2Q9UN36 371 aaKnown RBP11.33□□□□□ -0.6
TRAPPC9-202ENST00000438773 HCFC2Q9Y5Z7 792 aa11.33□□□□□ -0.6
TRAPPC9-202ENST00000438773 SLC22A2O15244 555 aa11.32□□□□□ -0.6
TRAPPC9-202ENST00000438773 CKMT2P17540 419 aa11.32□□□□□ -0.6
TRAPPC9-202ENST00000438773 PPP2R1BP30154 601 aa11.32□□□□□ -0.6
TRAPPC9-202ENST00000438773 ADRA1AP35348 466 aa11.32□□□□□ -0.6
TRAPPC9-202ENST00000438773 AP1S2P56377 157 aa11.32□□□□□ -0.6
TRAPPC9-202ENST00000438773 SLC7A9P82251 487 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms