RNA–Protein interactions for RNA: ENST00000437983.2

SMAD9-IT1-201, SMAD9 intronic transcript 1, humanhuman

TSL 3 BASIC

Gene SMAD9-IT1, Length 504 nt, Biotype sense intronic.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9-IT1-201ENST00000437983 HRNRQ86YZ3 2850 aaPredicted RBP11.81□□□□□ -0.52
SMAD9-IT1-201ENST00000437983 TLN2Q9Y4G6 2542 aa11.8□□□□□ -0.52
SMAD9-IT1-201ENST00000437983 FAM90A27PA6NNH2 459 aa11.8□□□□□ -0.52
SMAD9-IT1-201ENST00000437983 J3QL48 77 aa11.8□□□□□ -0.52
SMAD9-IT1-201ENST00000437983 BTN3A1O00481 513 aa11.8□□□□□ -0.52
SMAD9-IT1-201ENST00000437983 PIRTP0C851 137 aa11.8□□□□□ -0.52
SMAD9-IT1-201ENST00000437983 DNASE1P24855 282 aa11.8□□□□□ -0.52
SMAD9-IT1-201ENST00000437983 PBLDP30039 288 aaPredicted RBP11.8□□□□□ -0.52
SMAD9-IT1-201ENST00000437983 GSCP56915 257 aaPredicted RBP11.8□□□□□ -0.52
SMAD9-IT1-201ENST00000437983 HSF1Q00613 529 aa11.8□□□□□ -0.52
SMAD9-IT1-201ENST00000437983 CDR2Q01850 454 aa11.8□□□□□ -0.52
SMAD9-IT1-201ENST00000437983 NIPAL4Q0D2K0 466 aa11.8□□□□□ -0.52
SMAD9-IT1-201ENST00000437983 RBBP7Q16576 425 aa11.8□□□□□ -0.52
SMAD9-IT1-201ENST00000437983 NKG7Q16617 165 aa11.8□□□□□ -0.52
SMAD9-IT1-201ENST00000437983 TSNAXIP1Q2TAA8 658 aa11.8□□□□□ -0.52
SMAD9-IT1-201ENST00000437983 ERMARDQ5T6L9 678 aa11.8□□□□□ -0.52
SMAD9-IT1-201ENST00000437983 CYP4V2Q6ZWL3 525 aaPredicted RBP11.8□□□□□ -0.52
SMAD9-IT1-201ENST00000437983 HSCBQ8IWL3 235 aa11.8□□□□□ -0.52
SMAD9-IT1-201ENST00000437983 ARRDC2Q8TBH0 407 aa11.8□□□□□ -0.52
SMAD9-IT1-201ENST00000437983 PHF10Q8WUB8 498 aaKnown RBP11.8□□□□□ -0.52
SMAD9-IT1-201ENST00000437983 ZDHHC19Q8WVZ1 309 aaPredicted RBP11.8□□□□□ -0.52
SMAD9-IT1-201ENST00000437983 GPR137Q96N19 417 aa11.8□□□□□ -0.52
SMAD9-IT1-201ENST00000437983 POLR1EQ9GZS1 481 aaKnown RBP11.8□□□□□ -0.52
SMAD9-IT1-201ENST00000437983 ZNF395Q9H8N7 513 aaPredicted RBP11.8□□□□□ -0.52
SMAD9-IT1-201ENST00000437983 TXLNGQ9NUQ3 528 aa11.8□□□□□ -0.52
SMAD9-IT1-201ENST00000437983 PPT2Q9UMR5 302 aa11.8□□□□□ -0.52
SMAD9-IT1-201ENST00000437983 SHOC2Q9UQ13 582 aa11.8□□□□□ -0.52
SMAD9-IT1-201ENST00000437983 GTF3C1Q12789 2109 aa11.8□□□□□ -0.52
SMAD9-IT1-201ENST00000437983 ANKRD66B4E2M5 251 aa11.79□□□□□ -0.52
SMAD9-IT1-201ENST00000437983 ZSCAN9O15535 394 aaPredicted RBP11.79□□□□□ -0.52
SMAD9-IT1-201ENST00000437983 CTAG2O75638 210 aa11.79□□□□□ -0.52
SMAD9-IT1-201ENST00000437983 TOXO94900 526 aa11.79□□□□□ -0.52
SMAD9-IT1-201ENST00000437983 PRAMEF1O95521 474 aa11.79□□□□□ -0.52
SMAD9-IT1-201ENST00000437983 CELA2AP08217 269 aa11.79□□□□□ -0.52
SMAD9-IT1-201ENST00000437983 HOXD4P09016 255 aaPredicted RBP11.79□□□□□ -0.52
SMAD9-IT1-201ENST00000437983 ALAS2P22557 587 aa11.79□□□□□ -0.52
SMAD9-IT1-201ENST00000437983 MSX1P28360 303 aa11.79□□□□□ -0.52
SMAD9-IT1-201ENST00000437983 PPP1R2P41236 205 aa11.79□□□□□ -0.52
SMAD9-IT1-201ENST00000437983 DGKQP52824 942 aa11.79□□□□□ -0.52
SMAD9-IT1-201ENST00000437983 CDH6P55285 790 aa11.79□□□□□ -0.52
SMAD9-IT1-201ENST00000437983 DCDC1P59894 354 aa11.79□□□□□ -0.52
SMAD9-IT1-201ENST00000437983 CACNG1Q06432 222 aa11.79□□□□□ -0.52
SMAD9-IT1-201ENST00000437983 OLIG2Q13516 323 aa11.79□□□□□ -0.52
SMAD9-IT1-201ENST00000437983 ATP13A5Q4VNC0 1218 aa11.79□□□□□ -0.52
SMAD9-IT1-201ENST00000437983 KLHDC7AQ5VTJ3 777 aa11.79□□□□□ -0.52
SMAD9-IT1-201ENST00000437983 METRNLQ641Q3 311 aa11.79□□□□□ -0.52
SMAD9-IT1-201ENST00000437983 TMEM214Q6NUQ4 689 aaKnown RBP11.79□□□□□ -0.52
SMAD9-IT1-201ENST00000437983 DNAJC24Q6P3W2 148 aa11.79□□□□□ -0.52
SMAD9-IT1-201ENST00000437983 COX15Q7KZN9 410 aa11.79□□□□□ -0.52
SMAD9-IT1-201ENST00000437983 OVCH1Q7RTY7 1134 aa11.79□□□□□ -0.52
SMAD9-IT1-201ENST00000437983 TRIM73Q86UV7 250 aa11.79□□□□□ -0.52
SMAD9-IT1-201ENST00000437983 CHERPQ8IWX8 916 aaKnown RBP11.79□□□□□ -0.52
SMAD9-IT1-201ENST00000437983 ATPAF2Q8N5M1 289 aa11.79□□□□□ -0.52
SMAD9-IT1-201ENST00000437983 RASGEF1AQ8N9B8 481 aa11.79□□□□□ -0.52
SMAD9-IT1-201ENST00000437983 THAP3Q8WTV1 239 aaPredicted RBP11.79□□□□□ -0.52
SMAD9-IT1-201ENST00000437983 NAT14Q8WUY8 206 aa11.79□□□□□ -0.52
SMAD9-IT1-201ENST00000437983 NSMCE1Q8WV22 266 aa11.79□□□□□ -0.52
SMAD9-IT1-201ENST00000437983 N4BP2L2Q92802 583 aaPredicted RBP11.79□□□□□ -0.52
SMAD9-IT1-201ENST00000437983 C8orf44Q96CB5 159 aa11.79□□□□□ -0.52
SMAD9-IT1-201ENST00000437983 POLDIP3Q9BY77 421 aaKnown RBP11.79□□□□□ -0.52
SMAD9-IT1-201ENST00000437983 COQ3Q9NZJ6 369 aa11.79□□□□□ -0.52
SMAD9-IT1-201ENST00000437983 LRFN1Q9P244 771 aa11.79□□□□□ -0.52
SMAD9-IT1-201ENST00000437983 TTLL3Q9Y4R7 772 aa11.79□□□□□ -0.52
SMAD9-IT1-201ENST00000437983 OR2AG2A6NM03 316 aa11.78□□□□□ -0.52
SMAD9-IT1-201ENST00000437983 NPIPA5E9PKD4 350 aa11.78□□□□□ -0.52
SMAD9-IT1-201ENST00000437983 E9PLN8 166 aa11.78□□□□□ -0.52
SMAD9-IT1-201ENST00000437983 F8VZ95 297 aa11.78□□□□□ -0.52
SMAD9-IT1-201ENST00000437983 BIN1O00499 593 aa11.78□□□□□ -0.52
SMAD9-IT1-201ENST00000437983 KCNJ13O60928 360 aa11.78□□□□□ -0.52
SMAD9-IT1-201ENST00000437983 GFPT2O94808 682 aa11.78□□□□□ -0.52
SMAD9-IT1-201ENST00000437983 HPP00738 406 aa11.78□□□□□ -0.52
SMAD9-IT1-201ENST00000437983 PRR35P0CG20 571 aa11.78□□□□□ -0.52
SMAD9-IT1-201ENST00000437983 NSFP46459 744 aaKnown RBP11.78□□□□□ -0.52
SMAD9-IT1-201ENST00000437983 RPL26P61254 145 aaKnown RBP11.78□□□□□ -0.52
SMAD9-IT1-201ENST00000437983 GTF2H3Q13889 308 aa11.78□□□□□ -0.52
SMAD9-IT1-201ENST00000437983 FAM182AQ5T1J6 154 aa11.78□□□□□ -0.52
SMAD9-IT1-201ENST00000437983 PDPK2PQ6A1A2 396 aa11.78□□□□□ -0.52
SMAD9-IT1-201ENST00000437983 TMEM220Q6QAJ8 160 aa11.78□□□□□ -0.52
SMAD9-IT1-201ENST00000437983 CEP128Q6ZU80 1094 aa11.78□□□□□ -0.52
SMAD9-IT1-201ENST00000437983 KBTBD2Q8IY47 623 aa11.78□□□□□ -0.52
SMAD9-IT1-201ENST00000437983 MARVELD2Q8N4S9 558 aa11.78□□□□□ -0.52
SMAD9-IT1-201ENST00000437983 TAB3Q8N5C8 712 aaPredicted RBP11.78□□□□□ -0.52
SMAD9-IT1-201ENST00000437983 BEND7Q8N7W2 519 aaPredicted RBP11.78□□□□□ -0.52
SMAD9-IT1-201ENST00000437983 GDAP1Q8TB36 358 aa11.78□□□□□ -0.52
SMAD9-IT1-201ENST00000437983 CCDC110Q8TBZ0 833 aa11.78□□□□□ -0.52
SMAD9-IT1-201ENST00000437983 VKORC1Q9BQB6 163 aa11.78□□□□□ -0.52
SMAD9-IT1-201ENST00000437983 SRMSQ9H3Y6 488 aa11.78□□□□□ -0.52
SMAD9-IT1-201ENST00000437983 CLSTN2Q9H4D0 955 aa11.78□□□□□ -0.52
SMAD9-IT1-201ENST00000437983 FAM8A1Q9UBU6 413 aa11.78□□□□□ -0.52
SMAD9-IT1-201ENST00000437983 CTSFQ9UBX1 484 aa11.78□□□□□ -0.52
SMAD9-IT1-201ENST00000437983 NPIPA1Q9UND3 350 aa11.78□□□□□ -0.52
SMAD9-IT1-201ENST00000437983 RPL26L1Q9UNX3 145 aaKnown RBP11.78□□□□□ -0.52
SMAD9-IT1-201ENST00000437983 MRPS2Q9Y399 296 aaKnown RBP11.78□□□□□ -0.52
SMAD9-IT1-201ENST00000437983 EIF3CLB5ME19 914 aaKnown RBP11.77□□□□□ -0.53
SMAD9-IT1-201ENST00000437983 MATN2O00339 956 aa11.77□□□□□ -0.53
SMAD9-IT1-201ENST00000437983 GPR39O43194 453 aa11.77□□□□□ -0.53
SMAD9-IT1-201ENST00000437983 PMPCBO75439 489 aa11.77□□□□□ -0.53
SMAD9-IT1-201ENST00000437983 USP1O94782 785 aa11.77□□□□□ -0.53
SMAD9-IT1-201ENST00000437983 MT-CYBP00156 380 aaPredicted RBP11.77□□□□□ -0.53
SMAD9-IT1-201ENST00000437983 ABOP16442 354 aa11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms