RNA–Protein interactions for RNA: ENST00000435455.5

SMPD4-207, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 5

Gene SMPD4, Length 842 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-207ENST00000435455 TMEM184BQ9Y519 407 aaPredicted RBP15.77■□□□□ 0.12
SMPD4-207ENST00000435455 PIPSLA2A3N6 862 aa15.76■□□□□ 0.11
SMPD4-207ENST00000435455 BTN3A3O00478 584 aa15.76■□□□□ 0.11
SMPD4-207ENST00000435455 MAP3K7O43318 606 aa15.76■□□□□ 0.11
SMPD4-207ENST00000435455 NIPSNAP2O75323 286 aa15.76■□□□□ 0.11
SMPD4-207ENST00000435455 FGF5P12034 268 aa15.76■□□□□ 0.11
SMPD4-207ENST00000435455 CHRM3P20309 590 aa15.76■□□□□ 0.11
SMPD4-207ENST00000435455 PRDX3P30048 256 aaKnown RBP15.76■□□□□ 0.11
SMPD4-207ENST00000435455 ATP5DP30049 168 aa15.76■□□□□ 0.11
SMPD4-207ENST00000435455 SLC1A2P43004 574 aa15.76■□□□□ 0.11
SMPD4-207ENST00000435455 CTBP1Q13363 440 aa15.76■□□□□ 0.11
SMPD4-207ENST00000435455 HIF1AQ16665 826 aa15.76■□□□□ 0.11
SMPD4-207ENST00000435455 LARP7Q4G0J3 582 aaKnown RBP eCLIP15.76■□□□□ 0.11
SMPD4-207ENST00000435455 HSP90AA5PQ58FG0 334 aa15.76■□□□□ 0.11
SMPD4-207ENST00000435455 ZNF789Q5FWF6 425 aa15.76■□□□□ 0.11
SMPD4-207ENST00000435455 UNC5AQ6ZN44 842 aa15.76■□□□□ 0.11
SMPD4-207ENST00000435455 BPHLQ86WA6 291 aaPredicted RBP15.76■□□□□ 0.11
SMPD4-207ENST00000435455 PPP1R3BQ86XI6 285 aa15.76■□□□□ 0.11
SMPD4-207ENST00000435455 RASGRP3Q8IV61 690 aa15.76■□□□□ 0.11
SMPD4-207ENST00000435455 DENND6AQ8IWF6 608 aa15.76■□□□□ 0.11
SMPD4-207ENST00000435455 CACNA2D3Q8IZS8 1091 aa15.76■□□□□ 0.11
SMPD4-207ENST00000435455 D2HGDHQ8N465 521 aa15.76■□□□□ 0.11
SMPD4-207ENST00000435455 IL22RA1Q8N6P7 574 aa15.76■□□□□ 0.11
SMPD4-207ENST00000435455 BBOF1Q8ND07 529 aa15.76■□□□□ 0.11
SMPD4-207ENST00000435455 OR8K5Q8NH50 307 aa15.76■□□□□ 0.11
SMPD4-207ENST00000435455 CFAP61Q8NHU2 1237 aa15.76■□□□□ 0.11
SMPD4-207ENST00000435455 SNRNP27Q8WVK2 155 aaKnown RBP15.76■□□□□ 0.11
SMPD4-207ENST00000435455 NKD1Q969G9 470 aa15.76■□□□□ 0.11
SMPD4-207ENST00000435455 FCRL4Q96PJ5 515 aa15.76■□□□□ 0.11
SMPD4-207ENST00000435455 FBXO6Q9NRD1 293 aaPredicted RBP15.76■□□□□ 0.11
SMPD4-207ENST00000435455 SOHLH2Q9NX45 425 aa15.76■□□□□ 0.11
SMPD4-207ENST00000435455 PILRAQ9UKJ1 303 aa15.76■□□□□ 0.11
SMPD4-207ENST00000435455 BTRCQ9Y297 605 aa15.76■□□□□ 0.11
SMPD4-207ENST00000435455 COMMD10Q9Y6G5 202 aa15.76■□□□□ 0.11
SMPD4-207ENST00000435455 K7ENP7 123 aa15.75■□□□□ 0.11
SMPD4-207ENST00000435455 RAD1O60671 282 aa15.75■□□□□ 0.11
SMPD4-207ENST00000435455 BANF1O75531 89 aa15.75■□□□□ 0.11
SMPD4-207ENST00000435455 STK17BO94768 372 aa15.75■□□□□ 0.11
SMPD4-207ENST00000435455 FOLR1P15328 257 aa15.75■□□□□ 0.11
SMPD4-207ENST00000435455 MAP4P27816 1152 aaKnown RBP15.75■□□□□ 0.11
SMPD4-207ENST00000435455 CCNFP41002 786 aa15.75■□□□□ 0.11
SMPD4-207ENST00000435455 RPL21P46778 160 aaKnown RBP15.75■□□□□ 0.11
SMPD4-207ENST00000435455 TUBB3Q13509 450 aa15.75■□□□□ 0.11
SMPD4-207ENST00000435455 GBX1Q14549 363 aa15.75■□□□□ 0.11
SMPD4-207ENST00000435455 KYNUQ16719 465 aa15.75■□□□□ 0.11
SMPD4-207ENST00000435455 TTLL9Q3SXZ7 439 aa15.75■□□□□ 0.11
SMPD4-207ENST00000435455 ARHGAP40Q5TG30 622 aa15.75■□□□□ 0.11
SMPD4-207ENST00000435455 INO80CQ6PI98 192 aaPredicted RBP15.75■□□□□ 0.11
SMPD4-207ENST00000435455 SPESP1Q6UW49 350 aa15.75■□□□□ 0.11
SMPD4-207ENST00000435455 NLGN4XQ8N0W4 816 aa15.75■□□□□ 0.11
SMPD4-207ENST00000435455 ZBTB2Q8N680 514 aa15.75■□□□□ 0.11
SMPD4-207ENST00000435455 NLGN4YQ8NFZ3 816 aaPredicted RBP15.75■□□□□ 0.11
SMPD4-207ENST00000435455 SKA2Q8WVK7 121 aaPredicted RBP15.75■□□□□ 0.11
SMPD4-207ENST00000435455 ERP44Q9BS26 406 aa15.75■□□□□ 0.11
SMPD4-207ENST00000435455 RAB11FIP5Q9BXF6 653 aa15.75■□□□□ 0.11
SMPD4-207ENST00000435455 PITPNM3Q9BZ71 974 aa15.75■□□□□ 0.11
SMPD4-207ENST00000435455 ULBP3Q9BZM4 244 aa15.75■□□□□ 0.11
SMPD4-207ENST00000435455 FGF21Q9NSA1 209 aa15.75■□□□□ 0.11
SMPD4-207ENST00000435455 IARS2Q9NSE4 1012 aaKnown RBP15.75■□□□□ 0.11
SMPD4-207ENST00000435455 ACTR10Q9NZ32 417 aa15.75■□□□□ 0.11
SMPD4-207ENST00000435455 KLHL42Q9P2K6 505 aa15.75■□□□□ 0.11
SMPD4-207ENST00000435455 ZC3H7BQ9UGR2 993 aaKnown RBP15.75■□□□□ 0.11
SMPD4-207ENST00000435455 RARRES3Q9UL19 164 aa15.75■□□□□ 0.11
SMPD4-207ENST00000435455 TEX51A0A1B0GUA7 166 aa15.74■□□□□ 0.11
SMPD4-207ENST00000435455 SLC9B1P1A6NJY1 282 aa15.74■□□□□ 0.11
SMPD4-207ENST00000435455 SPAG6O75602 509 aa15.74■□□□□ 0.11
SMPD4-207ENST00000435455 DLGAP3O95886 979 aa15.74■□□□□ 0.11
SMPD4-207ENST00000435455 CHRM5P08912 532 aaPredicted RBP15.74■□□□□ 0.11
SMPD4-207ENST00000435455 EBLN1P0CF75 366 aa15.74■□□□□ 0.11
SMPD4-207ENST00000435455 TPBGLP0DKB5 382 aa15.74■□□□□ 0.11
SMPD4-207ENST00000435455 PKLRP30613 574 aa15.74■□□□□ 0.11
SMPD4-207ENST00000435455 ELK3P41970 407 aa15.74■□□□□ 0.11
SMPD4-207ENST00000435455 RAB28P51157 221 aa15.74■□□□□ 0.11
SMPD4-207ENST00000435455 TUBB4BP68371 445 aa15.74■□□□□ 0.11
SMPD4-207ENST00000435455 TUBB2AQ13885 445 aa15.74■□□□□ 0.11
SMPD4-207ENST00000435455 MAP7Q14244 749 aa15.74■□□□□ 0.11
SMPD4-207ENST00000435455 KCNAB1Q14722 419 aa15.74■□□□□ 0.11
SMPD4-207ENST00000435455 KIR2DS3Q14952 304 aa15.74■□□□□ 0.11
SMPD4-207ENST00000435455 KIAA0408Q6ZU52 694 aa15.74■□□□□ 0.11
SMPD4-207ENST00000435455 ZNF572Q7Z3I7 529 aaPredicted RBP15.74■□□□□ 0.11
SMPD4-207ENST00000435455 VASH2Q86V25 355 aa15.74■□□□□ 0.11
SMPD4-207ENST00000435455 IGDCC3Q8IVU1 814 aa15.74■□□□□ 0.11
SMPD4-207ENST00000435455 ZSCAN1Q8NBB4 408 aa15.74■□□□□ 0.11
SMPD4-207ENST00000435455 MAGEC3Q8TD91 643 aa15.74■□□□□ 0.11
SMPD4-207ENST00000435455 KCNJ9Q92806 393 aa15.74■□□□□ 0.11
SMPD4-207ENST00000435455 C16orf45Q96MC5 204 aaPredicted RBP15.74■□□□□ 0.11
SMPD4-207ENST00000435455 PPM1MQ96MI6 270 aa15.74■□□□□ 0.11
SMPD4-207ENST00000435455 NRTNQ99748 197 aa15.74■□□□□ 0.11
SMPD4-207ENST00000435455 TUBB2BQ9BVA1 445 aa15.74■□□□□ 0.11
SMPD4-207ENST00000435455 SYTL2Q9HCH5 934 aa15.74■□□□□ 0.11
SMPD4-207ENST00000435455 CHMP2BQ9UQN3 213 aa15.74■□□□□ 0.11
SMPD4-207ENST00000435455 SNX24Q9Y343 169 aa15.74■□□□□ 0.11
SMPD4-207ENST00000435455 TEX264Q9Y6I9 313 aa15.74■□□□□ 0.11
SMPD4-207ENST00000435455 SNRNP200O75643 2136 aaKnown RBP15.73■□□□□ 0.11
SMPD4-207ENST00000435455 RAD51CO43502 376 aa15.73■□□□□ 0.11
SMPD4-207ENST00000435455 ERVK-10P10266 1014 aa15.73■□□□□ 0.11
SMPD4-207ENST00000435455 ST6GAL1P15907 406 aa15.73■□□□□ 0.11
SMPD4-207ENST00000435455 UGT2B7P16662 529 aa15.73■□□□□ 0.11
SMPD4-207ENST00000435455 CLCN7P51798 805 aa15.73■□□□□ 0.11
SMPD4-207ENST00000435455 CKAP4Q07065 602 aaKnown RBP15.73■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms