RNA–Protein interactions for RNA: ENST00000434376.6

SCARF1-203, Transcript of scavenger receptor class F member 1, humanhuman

TSL 1 (best)

Gene SCARF1, Length 3,342 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-203ENST00000434376 PCDHGA4Q9Y5G9 962 aa15.25■□□□□ 0.03
SCARF1-203ENST00000434376 A0A087WXM4 84 aa15.24■□□□□ 0.03
SCARF1-203ENST00000434376 K7EPI3 171 aa15.24■□□□□ 0.03
SCARF1-203ENST00000434376 E2F6O75461 281 aa15.24■□□□□ 0.03
SCARF1-203ENST00000434376 CLTBP09497 229 aa15.24■□□□□ 0.03
SCARF1-203ENST00000434376 PAX3P23760 479 aa15.24■□□□□ 0.03
SCARF1-203ENST00000434376 TACR1P25103 407 aa15.24■□□□□ 0.03
SCARF1-203ENST00000434376 GLYATQ6IB77 296 aa15.24■□□□□ 0.03
SCARF1-203ENST00000434376 CMTR2Q8IYT2 770 aaKnown RBP15.24■□□□□ 0.03
SCARF1-203ENST00000434376 BPIFB6Q8NFQ5 453 aa15.24■□□□□ 0.03
SCARF1-203ENST00000434376 SUV39H2Q9H5I1 410 aa15.24■□□□□ 0.03
SCARF1-203ENST00000434376 SMOXQ9NWM0 555 aa15.24■□□□□ 0.03
SCARF1-203ENST00000434376 MOSPD1Q9UJG1 213 aa15.24■□□□□ 0.03
SCARF1-203ENST00000434376 DHRS7Q9Y394 339 aa15.24■□□□□ 0.03
SCARF1-203ENST00000434376 ZFC3H1O60293 1989 aaKnown RBP15.24■□□□□ 0.03
SCARF1-203ENST00000434376 OR7A17O14581 309 aa15.24■□□□□ 0.03
SCARF1-203ENST00000434376 ZNF682O95780 498 aa15.24■□□□□ 0.03
SCARF1-203ENST00000434376 HIST1H2AGP0C0S8 130 aaPredicted RBP15.24■□□□□ 0.03
SCARF1-203ENST00000434376 EPB42P16452 691 aa15.24■□□□□ 0.03
SCARF1-203ENST00000434376 HIST1H2ADP20671 130 aa15.24■□□□□ 0.03
SCARF1-203ENST00000434376 CCR7P32248 378 aa15.24■□□□□ 0.03
SCARF1-203ENST00000434376 SPAM1P38567 509 aa15.24■□□□□ 0.03
SCARF1-203ENST00000434376 ACVR1Q04771 509 aa15.24■□□□□ 0.03
SCARF1-203ENST00000434376 GTF2H3Q13889 308 aa15.24■□□□□ 0.03
SCARF1-203ENST00000434376 NR1D2Q14995 579 aa15.24■□□□□ 0.03
SCARF1-203ENST00000434376 ACOX1Q15067 660 aa15.24■□□□□ 0.03
SCARF1-203ENST00000434376 PTCHD3Q3KNS1 767 aa15.24■□□□□ 0.03
SCARF1-203ENST00000434376 CRTC3Q6UUV7 619 aa15.24■□□□□ 0.03
SCARF1-203ENST00000434376 ITIH5Q86UX2 942 aa15.24■□□□□ 0.03
SCARF1-203ENST00000434376 KLHDC8BQ8IXV7 354 aa15.24■□□□□ 0.03
SCARF1-203ENST00000434376 RGL4Q8IZJ4 473 aa15.24■□□□□ 0.03
SCARF1-203ENST00000434376 DCAF4L2Q8NA75 395 aa15.24■□□□□ 0.03
SCARF1-203ENST00000434376 HIST1H2AHQ96KK5 128 aa15.24■□□□□ 0.03
SCARF1-203ENST00000434376 HIST1H2AJQ99878 128 aa15.24■□□□□ 0.03
SCARF1-203ENST00000434376 H2AFJQ9BTM1 129 aa15.24■□□□□ 0.03
SCARF1-203ENST00000434376 HPS4Q9NQG7 708 aa15.24■□□□□ 0.03
SCARF1-203ENST00000434376 FAIMQ9NVQ4 179 aa15.24■□□□□ 0.03
SCARF1-203ENST00000434376 GPR45Q9Y5Y3 372 aa15.24■□□□□ 0.03
SCARF1-203ENST00000434376 BACE2Q9Y5Z0 518 aa15.24■□□□□ 0.03
SCARF1-203ENST00000434376 ASPDHA6ND91 283 aa15.23■□□□□ 0.03
SCARF1-203ENST00000434376 LEFTY1O75610 366 aa15.23■□□□□ 0.03
SCARF1-203ENST00000434376 MLYCDO95822 493 aa15.23■□□□□ 0.03
SCARF1-203ENST00000434376 RPS17P08708 135 aaKnown RBP15.23■□□□□ 0.03
SCARF1-203ENST00000434376 RPL26P61254 145 aaKnown RBP15.23■□□□□ 0.03
SCARF1-203ENST00000434376 SNRPD1P62314 119 aaKnown RBP15.23■□□□□ 0.03
SCARF1-203ENST00000434376 TNK2Q07912 1038 aa15.23■□□□□ 0.03
SCARF1-203ENST00000434376 CD300CQ08708 224 aa15.23■□□□□ 0.03
SCARF1-203ENST00000434376 SMARCB1Q12824 385 aa15.23■□□□□ 0.03
SCARF1-203ENST00000434376 PYCR3Q53H96 274 aa15.23■□□□□ 0.03
SCARF1-203ENST00000434376 BLOC1S3Q6QNY0 202 aa15.23■□□□□ 0.03
SCARF1-203ENST00000434376 CHST9Q7L1S5 443 aa15.23■□□□□ 0.03
SCARF1-203ENST00000434376 IGFLR1Q9H665 355 aa15.23■□□□□ 0.03
SCARF1-203ENST00000434376 RPF2Q9H7B2 306 aaKnown RBP15.23■□□□□ 0.03
SCARF1-203ENST00000434376 COMMD8Q9NX08 183 aa15.23■□□□□ 0.03
SCARF1-203ENST00000434376 VAPAQ9P0L0 249 aa15.23■□□□□ 0.03
SCARF1-203ENST00000434376 KIAA1522Q9P206 1035 aaPredicted RBP15.23■□□□□ 0.03
SCARF1-203ENST00000434376 FNIP2Q9P278 1114 aa15.23■□□□□ 0.03
SCARF1-203ENST00000434376 GNPTGQ9UJJ9 305 aa15.23■□□□□ 0.03
SCARF1-203ENST00000434376 LAMA1P25391 3075 aa15.23■□□□□ 0.03
SCARF1-203ENST00000434376 ANKRD36A6QL64 1941 aa15.23■□□□□ 0.03
SCARF1-203ENST00000434376 MYO1GB0I1T2 1018 aa15.23■□□□□ 0.03
SCARF1-203ENST00000434376 TAPBPO15533 448 aa15.23■□□□□ 0.03
SCARF1-203ENST00000434376 PPP3CCP48454 512 aa15.23■□□□□ 0.03
SCARF1-203ENST00000434376 PIGFQ07326 219 aa15.23■□□□□ 0.03
SCARF1-203ENST00000434376 PMS2P3Q13401 168 aa15.23■□□□□ 0.03
SCARF1-203ENST00000434376 RAB33AQ14088 237 aa15.23■□□□□ 0.03
SCARF1-203ENST00000434376 GRIN2CQ14957 1233 aa15.23■□□□□ 0.03
SCARF1-203ENST00000434376 ARHGEF6Q15052 776 aa15.23■□□□□ 0.03
SCARF1-203ENST00000434376 MAPKAPK3Q16644 382 aa15.23■□□□□ 0.03
SCARF1-203ENST00000434376 IER5LQ5T953 404 aa15.23■□□□□ 0.03
SCARF1-203ENST00000434376 ADAMTSL2Q86TH1 951 aa15.23■□□□□ 0.03
SCARF1-203ENST00000434376 TICAM1Q8IUC6 712 aa15.23■□□□□ 0.03
SCARF1-203ENST00000434376 GPR150Q8NGU9 434 aa15.23■□□□□ 0.03
SCARF1-203ENST00000434376 RHEBL1Q8TAI7 183 aa15.23■□□□□ 0.03
SCARF1-203ENST00000434376 KLK6Q92876 244 aa15.23■□□□□ 0.03
SCARF1-203ENST00000434376 TADA1Q96BN2 335 aa15.23■□□□□ 0.03
SCARF1-203ENST00000434376 ABHD8Q96I13 439 aa15.23■□□□□ 0.03
SCARF1-203ENST00000434376 RIOK2Q9BVS4 552 aaKnown RBP15.23■□□□□ 0.03
SCARF1-203ENST00000434376 IKZF5Q9H5V7 419 aa15.23■□□□□ 0.03
SCARF1-203ENST00000434376 TSC22D4Q9Y3Q8 395 aa15.23■□□□□ 0.03
SCARF1-203ENST00000434376 STK16O75716 305 aa15.23■□□□□ 0.03
SCARF1-203ENST00000434376 COL6A1P12109 1028 aa15.23■□□□□ 0.03
SCARF1-203ENST00000434376 CYP4B1P13584 511 aa15.23■□□□□ 0.03
SCARF1-203ENST00000434376 DGKAP23743 735 aa15.23■□□□□ 0.03
SCARF1-203ENST00000434376 FASP25445 335 aa15.23■□□□□ 0.03
SCARF1-203ENST00000434376 HNF4AP41235 474 aa15.23■□□□□ 0.03
SCARF1-203ENST00000434376 DGKEP52429 567 aa15.23■□□□□ 0.03
SCARF1-203ENST00000434376 INPP5AQ14642 412 aa15.23■□□□□ 0.03
SCARF1-203ENST00000434376 GPRC6AQ5T6X5 926 aa15.23■□□□□ 0.03
SCARF1-203ENST00000434376 EGFLAMQ63HQ2 1017 aa15.23■□□□□ 0.03
SCARF1-203ENST00000434376 CNKSR3Q6P9H4 555 aa15.23■□□□□ 0.03
SCARF1-203ENST00000434376 SNX20Q7Z614 316 aa15.23■□□□□ 0.03
SCARF1-203ENST00000434376 NSMCE2Q96MF7 247 aa15.23■□□□□ 0.03
SCARF1-203ENST00000434376 OR52E6Q96RD3 313 aa15.23■□□□□ 0.03
SCARF1-203ENST00000434376 YIPF2Q9BWQ6 316 aa15.23■□□□□ 0.03
SCARF1-203ENST00000434376 SLC8A2Q9UPR5 921 aa15.23■□□□□ 0.03
SCARF1-203ENST00000434376 SLC14A2Q15849 920 aa15.22■□□□□ 0.03
SCARF1-203ENST00000434376 CYP27C1Q4G0S4 372 aa15.22■□□□□ 0.03
SCARF1-203ENST00000434376 C22orf39Q6P5X5 142 aa15.22■□□□□ 0.03
SCARF1-203ENST00000434376 NCCRP1Q6ZVX7 275 aaPredicted RBP15.22■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms