RNA–Protein interactions for RNA: ENST00000433892.6

CD44-209, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 2,292 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-209ENST00000433892 ZNF461Q8TAF7 563 aa11.55□□□□□ -0.56
CD44-209ENST00000433892 LZICQ8WZA0 190 aa11.55□□□□□ -0.56
CD44-209ENST00000433892 CEP295NLQ96MC4 621 aa11.55□□□□□ -0.56
CD44-209ENST00000433892 OSBPL10Q9BXB5 764 aa11.55□□□□□ -0.56
CD44-209ENST00000433892 LHPPQ9H008 270 aa11.55□□□□□ -0.56
CD44-209ENST00000433892 TNKS2Q9H2K2 1166 aa11.55□□□□□ -0.56
CD44-209ENST00000433892 HPS4Q9NQG7 708 aa11.55□□□□□ -0.56
CD44-209ENST00000433892 DNMT3BQ9UBC3 853 aaKnown RBP11.55□□□□□ -0.56
CD44-209ENST00000433892 YIPF1Q9Y548 306 aa11.55□□□□□ -0.56
CD44-209ENST00000433892 PCDHB14Q9Y5E9 798 aa11.55□□□□□ -0.56
CD44-209ENST00000433892 PIKFYVEQ9Y2I7 2098 aa11.55□□□□□ -0.56
CD44-209ENST00000433892 STK16O75716 305 aa11.55□□□□□ -0.56
CD44-209ENST00000433892 B3GALT4O96024 378 aa11.55□□□□□ -0.56
CD44-209ENST00000433892 GSNP06396 782 aa11.55□□□□□ -0.56
CD44-209ENST00000433892 TFPTP0C1Z6 253 aa11.55□□□□□ -0.56
CD44-209ENST00000433892 EBLN1P0CF75 366 aa11.55□□□□□ -0.56
CD44-209ENST00000433892 CCNA2P20248 432 aa11.55□□□□□ -0.56
CD44-209ENST00000433892 MAP4P27816 1152 aaKnown RBP11.55□□□□□ -0.56
CD44-209ENST00000433892 PHC1P78364 1004 aa11.55□□□□□ -0.56
CD44-209ENST00000433892 PPP2R2BQ00005 443 aa11.55□□□□□ -0.56
CD44-209ENST00000433892 PIGFQ07326 219 aa11.55□□□□□ -0.56
CD44-209ENST00000433892 GRSF1Q12849 480 aaKnown RBP eCLIP11.55□□□□□ -0.56
CD44-209ENST00000433892 NFATC3Q12968 1075 aa11.55□□□□□ -0.56
CD44-209ENST00000433892 PON2Q15165 354 aa11.55□□□□□ -0.56
CD44-209ENST00000433892 CDKN3Q16667 212 aa11.55□□□□□ -0.56
CD44-209ENST00000433892 USP39Q53GS9 565 aaKnown RBP11.55□□□□□ -0.56
CD44-209ENST00000433892 TTC23Q5W5X9 447 aa11.55□□□□□ -0.56
CD44-209ENST00000433892 TMEM179BQ7Z7N9 219 aa11.55□□□□□ -0.56
CD44-209ENST00000433892 ANKRD46Q86W74 232 aa11.55□□□□□ -0.56
CD44-209ENST00000433892 ZC3H7AQ8IWR0 971 aaKnown RBP11.55□□□□□ -0.56
CD44-209ENST00000433892 CHCHD4Q8N4Q1 142 aa11.55□□□□□ -0.56
CD44-209ENST00000433892 DCAF4L2Q8NA75 395 aa11.55□□□□□ -0.56
CD44-209ENST00000433892 HJURPQ8NCD3 748 aaPredicted RBP11.55□□□□□ -0.56
CD44-209ENST00000433892 SNX19Q92543 992 aa11.55□□□□□ -0.56
CD44-209ENST00000433892 TANKQ92844 425 aa11.55□□□□□ -0.56
CD44-209ENST00000433892 SH3GL1Q99961 368 aa11.55□□□□□ -0.56
CD44-209ENST00000433892 NTMT1Q9BV86 223 aa11.55□□□□□ -0.56
CD44-209ENST00000433892 ACPTQ9BZG2 426 aa11.55□□□□□ -0.56
CD44-209ENST00000433892 KAT8Q9H7Z6 458 aaKnown RBP11.55□□□□□ -0.56
CD44-209ENST00000433892 IRAK4Q9NWZ3 460 aa11.55□□□□□ -0.56
CD44-209ENST00000433892 C1orf109Q9NX04 203 aa11.55□□□□□ -0.56
CD44-209ENST00000433892 STOML2Q9UJZ1 356 aa11.55□□□□□ -0.56
CD44-209ENST00000433892 ABT1Q9ULW3 272 aaKnown RBP11.55□□□□□ -0.56
CD44-209ENST00000433892 DLGAP4Q9Y2H0 992 aa11.55□□□□□ -0.56
CD44-209ENST00000433892 U3KQV3 271 aa11.55□□□□□ -0.56
CD44-209ENST00000433892 TRBV5-4A0A0C4DH59 114 aa11.54□□□□□ -0.56
CD44-209ENST00000433892 TRIM64BA6NI03 449 aa11.54□□□□□ -0.56
CD44-209ENST00000433892 ABCB7O75027 752 aa11.54□□□□□ -0.56
CD44-209ENST00000433892 CREG1O75629 220 aa11.54□□□□□ -0.56
CD44-209ENST00000433892 SEC14L2O76054 403 aa11.54□□□□□ -0.56
CD44-209ENST00000433892 KCNAB2Q13303 367 aa11.54□□□□□ -0.56
CD44-209ENST00000433892 CTU2Q2VPK5 515 aaKnown RBP11.54□□□□□ -0.56
CD44-209ENST00000433892 RBM48Q5RL73 367 aaKnown RBP11.54□□□□□ -0.56
CD44-209ENST00000433892 ANKRD26P1Q6NSI1 321 aa11.54□□□□□ -0.56
CD44-209ENST00000433892 MACC1Q6ZN28 852 aa11.54□□□□□ -0.56
CD44-209ENST00000433892 TMEM150AQ86TG1 271 aa11.54□□□□□ -0.56
CD44-209ENST00000433892 RBM23Q86U06 439 aaKnown RBP11.54□□□□□ -0.56
CD44-209ENST00000433892 ZSWIM9Q86XI8 627 aa11.54□□□□□ -0.56
CD44-209ENST00000433892 MICU2Q8IYU8 434 aa11.54□□□□□ -0.56
CD44-209ENST00000433892 NAT16Q8N8M0 369 aa11.54□□□□□ -0.56
CD44-209ENST00000433892 ARL14EPQ8N8R7 260 aaPredicted RBP11.54□□□□□ -0.56
CD44-209ENST00000433892 ZNF555Q8NEP9 628 aa11.54□□□□□ -0.56
CD44-209ENST00000433892 NETO1Q8TDF5 533 aa11.54□□□□□ -0.56
CD44-209ENST00000433892 ADAMTS19Q8TE59 1207 aa11.54□□□□□ -0.56
CD44-209ENST00000433892 SNRNP27Q8WVK2 155 aaKnown RBP11.54□□□□□ -0.56
CD44-209ENST00000433892 USP7Q93009 1102 aa11.54□□□□□ -0.56
CD44-209ENST00000433892 ACDQ96AP0 544 aa11.54□□□□□ -0.56
CD44-209ENST00000433892 PARVBQ9HBI1 364 aa11.54□□□□□ -0.56
CD44-209ENST00000433892 DCAF13Q9NV06 445 aaKnown RBP11.54□□□□□ -0.56
CD44-209ENST00000433892 ARL15Q9NXU5 204 aa11.54□□□□□ -0.56
CD44-209ENST00000433892 TMEM9Q9P0T7 183 aa11.54□□□□□ -0.56
CD44-209ENST00000433892 TRPS1Q9UHF7 1281 aa11.54□□□□□ -0.56
CD44-209ENST00000433892 TDRKHQ9Y2W6 561 aaKnown RBP11.54□□□□□ -0.56
CD44-209ENST00000433892 BACE2Q9Y5Z0 518 aa11.54□□□□□ -0.56
CD44-209ENST00000433892 HOXA2O43364 376 aa11.53□□□□□ -0.56
CD44-209ENST00000433892 HS6ST1O60243 411 aa11.53□□□□□ -0.56
CD44-209ENST00000433892 E2F6O75461 281 aa11.53□□□□□ -0.56
CD44-209ENST00000433892 WDR47O94967 919 aa11.53□□□□□ -0.56
CD44-209ENST00000433892 SCELO95171 688 aa11.53□□□□□ -0.56
CD44-209ENST00000433892 CLDN9O95484 217 aa11.53□□□□□ -0.56
CD44-209ENST00000433892 SERPINA1P01009 418 aa11.53□□□□□ -0.56
CD44-209ENST00000433892 PDYNP01213 254 aa11.53□□□□□ -0.56
CD44-209ENST00000433892 JUNBP17275 347 aaPredicted RBP11.53□□□□□ -0.56
CD44-209ENST00000433892 EPORP19235 508 aa11.53□□□□□ -0.56
CD44-209ENST00000433892 NEK2P51955 445 aa11.53□□□□□ -0.56
CD44-209ENST00000433892 TMBIM6P55061 237 aa11.53□□□□□ -0.56
CD44-209ENST00000433892 SP3Q02447 781 aa11.53□□□□□ -0.56
CD44-209ENST00000433892 SMU1Q2TAY7 513 aa11.53□□□□□ -0.56
CD44-209ENST00000433892 C6orf141Q5SZD1 244 aa11.53□□□□□ -0.56
CD44-209ENST00000433892 LHX8Q68G74 356 aa11.53□□□□□ -0.56
CD44-209ENST00000433892 TXNDC8Q6A555 127 aa11.53□□□□□ -0.56
CD44-209ENST00000433892 RETSATQ6NUM9 610 aa11.53□□□□□ -0.56
CD44-209ENST00000433892 DET1Q7L5Y6 550 aa11.53□□□□□ -0.56
CD44-209ENST00000433892 DNAJB7Q7Z6W7 309 aaPredicted RBP11.53□□□□□ -0.56
CD44-209ENST00000433892 SLC22A15Q8IZD6 547 aa11.53□□□□□ -0.56
CD44-209ENST00000433892 SPARTQ8N0X7 666 aa11.53□□□□□ -0.56
CD44-209ENST00000433892 NXPE1Q8N323 547 aa11.53□□□□□ -0.56
CD44-209ENST00000433892 GPR26Q8NDV2 337 aa11.53□□□□□ -0.56
CD44-209ENST00000433892 CHDHQ8NE62 594 aaPredicted RBP11.53□□□□□ -0.56
CD44-209ENST00000433892 FRS2Q8WU20 508 aa11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms