RNA–Protein interactions for RNA: ENST00000433541.1

TREX1-201, Transcript of three prime repair exonuclease 1, humanhuman

TSL 1 (best) BASIC

Gene TREX1, Length 1,105 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1-201ENST00000433541 CDC42EP4Q9H3Q1 356 aaKnown RBP15.08■□□□□ 0
TREX1-201ENST00000433541 RHOJQ9H4E5 214 aa15.08■□□□□ 0
TREX1-201ENST00000433541 POLR1BQ9H9Y6 1135 aa15.08■□□□□ 0
TREX1-201ENST00000433541 SMYD2Q9NRG4 433 aa15.08■□□□□ 0
TREX1-201ENST00000433541 WDR70Q9NW82 654 aa15.08■□□□□ 0
TREX1-201ENST00000433541 VWA7Q9Y334 891 aa15.08■□□□□ 0
TREX1-201ENST00000433541 IKBKGQ9Y6K9 419 aa15.08■□□□□ 0
TREX1-201ENST00000433541 PCM1Q15154 2024 aa15.07■□□□□ 0
TREX1-201ENST00000433541 PIPSLA2A3N6 862 aa15.07■□□□□ 0
TREX1-201ENST00000433541 FAM221BA6H8Z2 402 aa15.07■□□□□ 0
TREX1-201ENST00000433541 FAM159BA6NKW6 160 aa15.07■□□□□ 0
TREX1-201ENST00000433541 MATN2O00339 956 aa15.07■□□□□ 0
TREX1-201ENST00000433541 PLD2O14939 933 aa15.07■□□□□ 0
TREX1-201ENST00000433541 HGSO14964 777 aaPredicted RBP15.07■□□□□ 0
TREX1-201ENST00000433541 CBSLP0DN79 551 aa15.07■□□□□ 0
TREX1-201ENST00000433541 HGFP14210 728 aa15.07■□□□□ 0
TREX1-201ENST00000433541 CDH3P22223 829 aa15.07■□□□□ 0
TREX1-201ENST00000433541 CBSP35520 551 aa15.07■□□□□ 0
TREX1-201ENST00000433541 GP5P40197 560 aa15.07■□□□□ 0
TREX1-201ENST00000433541 CCNFP41002 786 aa15.07■□□□□ 0
TREX1-201ENST00000433541 PPP1CAP62136 330 aa15.07■□□□□ 0
TREX1-201ENST00000433541 ZFP36L1Q07352 338 aaKnown RBP15.07■□□□□ 0
TREX1-201ENST00000433541 CYP4F3Q08477 520 aa15.07■□□□□ 0
TREX1-201ENST00000433541 ILF2Q12905 390 aaKnown RBP15.07■□□□□ 0
TREX1-201ENST00000433541 SQSTM1Q13501 440 aa15.07■□□□□ 0
TREX1-201ENST00000433541 TSTA3Q13630 321 aaPredicted RBP15.07■□□□□ 0
TREX1-201ENST00000433541 C16orf72Q14CZ0 275 aa15.07■□□□□ 0
TREX1-201ENST00000433541 EFTUD2Q15029 972 aaKnown RBP eCLIP15.07■□□□□ 0
TREX1-201ENST00000433541 LRRC8EQ6NSJ5 796 aa15.07■□□□□ 0
TREX1-201ENST00000433541 TAX1BP1Q86VP1 789 aa15.07■□□□□ 0
TREX1-201ENST00000433541 GSPT2Q8IYD1 628 aaKnown RBP15.07■□□□□ 0
TREX1-201ENST00000433541 UHMK1Q8TAS1 419 aaKnown RBP15.07■□□□□ 0
TREX1-201ENST00000433541 RAD51AP1Q96B01 352 aa15.07■□□□□ 0
TREX1-201ENST00000433541 LINGO1Q96FE5 620 aa15.07■□□□□ 0
TREX1-201ENST00000433541 TFB2MQ9H5Q4 396 aaKnown RBP15.07■□□□□ 0
TREX1-201ENST00000433541 CCDC86Q9H6F5 360 aaKnown RBP15.07■□□□□ 0
TREX1-201ENST00000433541 SOHLH2Q9NX45 425 aa15.07■□□□□ 0
TREX1-201ENST00000433541 KLHL42Q9P2K6 505 aa15.07■□□□□ 0
TREX1-201ENST00000433541 ICKQ9UPZ9 632 aa15.07■□□□□ 0
TREX1-201ENST00000433541 MN1Q10571 1320 aaPredicted RBP15.07■□□□□ 0
TREX1-201ENST00000433541 EFCAB7A8K855 629 aa15.06■□□□□ 0
TREX1-201ENST00000433541 C2orf74A8MZ97 194 aa15.06■□□□□ 0
TREX1-201ENST00000433541 ISM1B1AKI9 464 aa15.06■□□□□ 0
TREX1-201ENST00000433541 C1QTNF9BB2RNN3 333 aa15.06■□□□□ 0
TREX1-201ENST00000433541 BTN3A1O00481 513 aa15.06■□□□□ 0
TREX1-201ENST00000433541 MAP3K7O43318 606 aa15.06■□□□□ 0
TREX1-201ENST00000433541 KIF1CO43896 1103 aaKnown RBP15.06■□□□□ 0
TREX1-201ENST00000433541 TNFSF15O95150 251 aa15.06■□□□□ 0
TREX1-201ENST00000433541 C1orf105O95561 183 aa15.06■□□□□ 0
TREX1-201ENST00000433541 C1QTNF9P0C862 333 aa15.06■□□□□ 0
TREX1-201ENST00000433541 MPC1LP0DKB6 136 aa15.06■□□□□ 0
TREX1-201ENST00000433541 ITIH1P19827 911 aa15.06■□□□□ 0
TREX1-201ENST00000433541 ECHS1P30084 290 aa15.06■□□□□ 0
TREX1-201ENST00000433541 SPRP35270 261 aaPredicted RBP15.06■□□□□ 0
TREX1-201ENST00000433541 IL2P60568 153 aa15.06■□□□□ 0
TREX1-201ENST00000433541 NAB1Q13506 487 aa15.06■□□□□ 0
TREX1-201ENST00000433541 CAMK2BQ13554 666 aa15.06■□□□□ 0
TREX1-201ENST00000433541 PAQR3Q6TCH7 311 aa15.06■□□□□ 0
TREX1-201ENST00000433541 UBE2R2Q712K3 238 aaPredicted RBP15.06■□□□□ 0
TREX1-201ENST00000433541 PIWIL4Q7Z3Z4 852 aaKnown RBP15.06■□□□□ 0
TREX1-201ENST00000433541 C2orf73Q8N5S3 287 aaPredicted RBP15.06■□□□□ 0
TREX1-201ENST00000433541 MDM1Q8TC05 714 aa15.06■□□□□ 0
TREX1-201ENST00000433541 EEF1AKMT1Q8WVE0 214 aa15.06■□□□□ 0
TREX1-201ENST00000433541 TSPAN17Q96FV3 270 aa15.06■□□□□ 0
TREX1-201ENST00000433541 CYTH2Q99418 400 aa15.06■□□□□ 0
TREX1-201ENST00000433541 RBBP8Q99708 897 aa15.06■□□□□ 0
TREX1-201ENST00000433541 NRTNQ99748 197 aa15.06■□□□□ 0
TREX1-201ENST00000433541 RAB11FIP5Q9BXF6 653 aa15.06■□□□□ 0
TREX1-201ENST00000433541 LNPEPQ9UIQ6 1025 aa15.06■□□□□ 0
TREX1-201ENST00000433541 SNRNP200O75643 2136 aaKnown RBP15.05■□□□□ 0
TREX1-201ENST00000433541 TLCD2A6NGC4 264 aa15.05■□□□□ -0
TREX1-201ENST00000433541 BTN3A3O00478 584 aa15.05■□□□□ -0
TREX1-201ENST00000433541 ZBTB14O43829 449 aa15.05■□□□□ -0
TREX1-201ENST00000433541 BRINP1O60477 761 aa15.05■□□□□ -0
TREX1-201ENST00000433541 C9P02748 559 aa15.05■□□□□ -0
TREX1-201ENST00000433541 FDXRP22570 491 aa15.05■□□□□ -0
TREX1-201ENST00000433541 LSSP48449 732 aa15.05■□□□□ -0
TREX1-201ENST00000433541 RAB28P51157 221 aa15.05■□□□□ -0
TREX1-201ENST00000433541 PGGT1BP53609 377 aa15.05■□□□□ -0
TREX1-201ENST00000433541 TUBB4BP68371 445 aa15.05■□□□□ -0
TREX1-201ENST00000433541 FOXM1Q08050 763 aa15.05■□□□□ -0
TREX1-201ENST00000433541 GBX1Q14549 363 aa15.05■□□□□ -0
TREX1-201ENST00000433541 USP10Q14694 798 aaKnown RBP15.05■□□□□ -0
TREX1-201ENST00000433541 GRTP1Q5TC63 336 aa15.05■□□□□ -0
TREX1-201ENST00000433541 TMEM164Q5U3C3 297 aa15.05■□□□□ -0
TREX1-201ENST00000433541 NEK10Q6ZWH5 1172 aa15.05■□□□□ -0
TREX1-201ENST00000433541 CYS1Q717R9 158 aa15.05■□□□□ -0
TREX1-201ENST00000433541 SPNS2Q8IVW8 549 aa15.05■□□□□ -0
TREX1-201ENST00000433541 LSMEM2Q8N112 164 aa15.05■□□□□ -0
TREX1-201ENST00000433541 UBXN4Q92575 508 aa15.05■□□□□ -0
TREX1-201ENST00000433541 GATA6Q92908 595 aa15.05■□□□□ -0
TREX1-201ENST00000433541 IL17FQ96PD4 163 aa15.05■□□□□ -0
TREX1-201ENST00000433541 CD180Q99467 661 aa15.05■□□□□ -0
TREX1-201ENST00000433541 MAP3K3Q99759 626 aa15.05■□□□□ -0
TREX1-201ENST00000433541 OLFM1Q99784 485 aa15.05■□□□□ -0
TREX1-201ENST00000433541 ABCF3Q9NUQ8 709 aa15.05■□□□□ -0
TREX1-201ENST00000433541 ACTR10Q9NZ32 417 aa15.05■□□□□ -0
TREX1-201ENST00000433541 OR6C2Q9NZP2 312 aa15.05■□□□□ -0
TREX1-201ENST00000433541 NOL12Q9UGY1 213 aaKnown RBP eCLIP15.05■□□□□ -0
TREX1-201ENST00000433541 MED16Q9Y2X0 877 aa15.05■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms