RNA–Protein interactions for RNA: ENST00000431390.5

HMGN1-206, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 1,552 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-206ENST00000431390 OVGP1Q12889 678 aa17.79■□□□□ 0.44
HMGN1-206ENST00000431390 PRKAA1Q13131 559 aa17.79■□□□□ 0.44
HMGN1-206ENST00000431390 TPRG1LQ5T0D9 272 aa17.79■□□□□ 0.44
HMGN1-206ENST00000431390 TTC23LQ6PF05 361 aa17.79■□□□□ 0.44
HMGN1-206ENST00000431390 UNC5DQ6UXZ4 953 aa17.79■□□□□ 0.44
HMGN1-206ENST00000431390 PRR23CQ6ZRP0 262 aa17.79■□□□□ 0.44
HMGN1-206ENST00000431390 PDZD3Q86UT5 571 aa17.79■□□□□ 0.44
HMGN1-206ENST00000431390 DCP2Q8IU60 420 aaKnown RBP17.79■□□□□ 0.44
HMGN1-206ENST00000431390 KIRREL3Q8IZU9 778 aa17.79■□□□□ 0.44
HMGN1-206ENST00000431390 LSMEM2Q8N112 164 aa17.79■□□□□ 0.44
HMGN1-206ENST00000431390 RHBDF1Q96CC6 855 aa17.79■□□□□ 0.44
HMGN1-206ENST00000431390 MOCOSQ96EN8 888 aa17.79■□□□□ 0.44
HMGN1-206ENST00000431390 PDXPQ96GD0 296 aa17.79■□□□□ 0.44
HMGN1-206ENST00000431390 ILKAPQ9H0C8 392 aaPredicted RBP17.79■□□□□ 0.44
HMGN1-206ENST00000431390 CARS2Q9HA77 564 aaKnown RBP17.79■□□□□ 0.44
HMGN1-206ENST00000431390 KLC4Q9NSK0 619 aa17.79■□□□□ 0.44
HMGN1-206ENST00000431390 ARL15Q9NXU5 204 aa17.79■□□□□ 0.44
HMGN1-206ENST00000431390 KLHL14Q9P2G3 628 aa17.79■□□□□ 0.44
HMGN1-206ENST00000431390 INVSQ9Y283 1065 aa17.79■□□□□ 0.44
HMGN1-206ENST00000431390 GPSM3Q9Y4H4 160 aa17.79■□□□□ 0.44
HMGN1-206ENST00000431390 ARHGEF33A8MVX0 844 aa17.78■□□□□ 0.44
HMGN1-206ENST00000431390 GDF9O60383 454 aa17.78■□□□□ 0.44
HMGN1-206ENST00000431390 LRP3O75074 770 aa17.78■□□□□ 0.44
HMGN1-206ENST00000431390 CHRNGP07510 517 aa17.78■□□□□ 0.44
HMGN1-206ENST00000431390 LRP8Q14114 963 aa17.78■□□□□ 0.44
HMGN1-206ENST00000431390 CFAP61Q8NHU2 1237 aa17.78■□□□□ 0.44
HMGN1-206ENST00000431390 ZNF483Q8TF39 744 aaPredicted RBP17.78■□□□□ 0.44
HMGN1-206ENST00000431390 SIKE1Q9BRV8 207 aa17.78■□□□□ 0.44
HMGN1-206ENST00000431390 ACSS2Q9NR19 701 aa17.78■□□□□ 0.44
HMGN1-206ENST00000431390 DGKBQ9Y6T7 804 aa17.78■□□□□ 0.44
HMGN1-206ENST00000431390 SPAG17Q6Q759 2223 aa17.77■□□□□ 0.44
HMGN1-206ENST00000431390 MEI4A8MW99 385 aa17.77■□□□□ 0.44
HMGN1-206ENST00000431390 TAPBPO15533 448 aa17.77■□□□□ 0.44
HMGN1-206ENST00000431390 MAP3K13O43283 966 aa17.77■□□□□ 0.44
HMGN1-206ENST00000431390 C1orf105O95561 183 aa17.77■□□□□ 0.44
HMGN1-206ENST00000431390 THEGLP0DJG4 465 aa17.77■□□□□ 0.44
HMGN1-206ENST00000431390 GGT5P36269 586 aa17.77■□□□□ 0.44
HMGN1-206ENST00000431390 AGTR2P50052 363 aa17.77■□□□□ 0.44
HMGN1-206ENST00000431390 CLCNKAP51800 687 aa17.77■□□□□ 0.44
HMGN1-206ENST00000431390 HK2P52789 917 aa17.77■□□□□ 0.44
HMGN1-206ENST00000431390 SRP54P61011 504 aaKnown RBP17.77■□□□□ 0.44
HMGN1-206ENST00000431390 CSRP2Q16527 193 aa17.77■□□□□ 0.44
HMGN1-206ENST00000431390 EEF1AKMT2Q5JPI9 291 aaKnown RBP17.77■□□□□ 0.44
HMGN1-206ENST00000431390 IQCHQ86VS3 1027 aa17.77■□□□□ 0.44
HMGN1-206ENST00000431390 WDR5BQ86VZ2 330 aa17.77■□□□□ 0.44
HMGN1-206ENST00000431390 WDR75Q8IWA0 830 aaKnown RBP17.77■□□□□ 0.44
HMGN1-206ENST00000431390 SLC22A18ASQ8N1D0 253 aa17.77■□□□□ 0.44
HMGN1-206ENST00000431390 ZNF781Q8N8C0 355 aa17.77■□□□□ 0.44
HMGN1-206ENST00000431390 KLHDC7BQ96G42 594 aa17.77■□□□□ 0.44
HMGN1-206ENST00000431390 SEC16BQ96JE7 1060 aa17.77■□□□□ 0.44
HMGN1-206ENST00000431390 CCDC138Q96M89 665 aa17.77■□□□□ 0.44
HMGN1-206ENST00000431390 SLC6A18Q96N87 628 aa17.77■□□□□ 0.44
HMGN1-206ENST00000431390 ZDHHC5Q9C0B5 715 aa17.77■□□□□ 0.44
HMGN1-206ENST00000431390 DUSP15Q9H1R2 295 aaPredicted RBP17.77■□□□□ 0.44
HMGN1-206ENST00000431390 NPHS2Q9NP85 383 aa17.77■□□□□ 0.44
HMGN1-206ENST00000431390 AASDHPPTQ9NRN7 309 aa17.77■□□□□ 0.44
HMGN1-206ENST00000431390 WWOXQ9NZC7 414 aa17.77■□□□□ 0.44
HMGN1-206ENST00000431390 PCTPQ9UKL6 214 aa17.77■□□□□ 0.44
HMGN1-206ENST00000431390 SPTY2D1-AS1A0A0U1RR47 76 aa17.76■□□□□ 0.43
HMGN1-206ENST00000431390 LRRC14BA6NHZ5 514 aa17.76■□□□□ 0.43
HMGN1-206ENST00000431390 IFRD1O00458 451 aaPredicted RBP17.76■□□□□ 0.43
HMGN1-206ENST00000431390 E2F3O00716 465 aa17.76■□□□□ 0.43
HMGN1-206ENST00000431390 SLC35G4P0C7Q5 338 aa17.76■□□□□ 0.43
HMGN1-206ENST00000431390 BCKDHBP21953 392 aa17.76■□□□□ 0.43
HMGN1-206ENST00000431390 CCR10P46092 362 aa17.76■□□□□ 0.43
HMGN1-206ENST00000431390 CLCQ05315 142 aa17.76■□□□□ 0.43
HMGN1-206ENST00000431390 ALG11Q2TAA5 492 aa17.76■□□□□ 0.43
HMGN1-206ENST00000431390 CACNA2D3Q8IZS8 1091 aa17.76■□□□□ 0.43
HMGN1-206ENST00000431390 MFSD2AQ8NA29 543 aa17.76■□□□□ 0.43
HMGN1-206ENST00000431390 MAGEC3Q8TD91 643 aa17.76■□□□□ 0.43
HMGN1-206ENST00000431390 ATL1Q8WXF7 558 aa17.76■□□□□ 0.43
HMGN1-206ENST00000431390 FBXL8Q96CD0 374 aa17.76■□□□□ 0.43
HMGN1-206ENST00000431390 TMEM79Q9BSE2 394 aa17.76■□□□□ 0.43
HMGN1-206ENST00000431390 CD244Q9BZW8 370 aa17.76■□□□□ 0.43
HMGN1-206ENST00000431390 TRNAU1APQ9NX07 287 aaKnown RBP17.76■□□□□ 0.43
HMGN1-206ENST00000431390 EIF2B4Q9UI10 523 aaKnown RBP17.76■□□□□ 0.43
HMGN1-206ENST00000431390 MLYCDO95822 493 aa17.75■□□□□ 0.43
HMGN1-206ENST00000431390 RPN2P04844 631 aa17.75■□□□□ 0.43
HMGN1-206ENST00000431390 IDSP22304 550 aa17.75■□□□□ 0.43
HMGN1-206ENST00000431390 BDKRB1P46663 353 aa17.75■□□□□ 0.43
HMGN1-206ENST00000431390 RPL14P50914 215 aaKnown RBP17.75■□□□□ 0.43
HMGN1-206ENST00000431390 RACK1P63244 317 aaKnown RBP17.75■□□□□ 0.43
HMGN1-206ENST00000431390 LCP2Q13094 533 aa17.75■□□□□ 0.43
HMGN1-206ENST00000431390 CAPRIN2Q6IMN6 1127 aaKnown RBP17.75■□□□□ 0.43
HMGN1-206ENST00000431390 MBOAT1Q6ZNC8 495 aa17.75■□□□□ 0.43
HMGN1-206ENST00000431390 RPS27LQ71UM5 84 aaKnown RBP17.75■□□□□ 0.43
HMGN1-206ENST00000431390 LONP2Q86WA8 852 aa17.75■□□□□ 0.43
HMGN1-206ENST00000431390 DEFB119Q8N690 84 aa17.75■□□□□ 0.43
HMGN1-206ENST00000431390 CCDC197Q8NCU1 140 aa17.75■□□□□ 0.43
HMGN1-206ENST00000431390 TFGQ92734 400 aaPredicted RBP17.75■□□□□ 0.43
HMGN1-206ENST00000431390 TSACCQ96A04 125 aaPredicted RBP17.75■□□□□ 0.43
HMGN1-206ENST00000431390 HSPA12BQ96MM6 686 aa17.75■□□□□ 0.43
HMGN1-206ENST00000431390 WWP1Q9H0M0 922 aa17.75■□□□□ 0.43
HMGN1-206ENST00000431390 OSGEPL1Q9H4B0 414 aa17.75■□□□□ 0.43
HMGN1-206ENST00000431390 PNPOQ9NVS9 261 aa17.75■□□□□ 0.43
HMGN1-206ENST00000431390 KCNK6Q9Y257 313 aa17.75■□□□□ 0.43
HMGN1-206ENST00000431390 STK38LQ9Y2H1 464 aa17.75■□□□□ 0.43
HMGN1-206ENST00000431390 A0A1W2PR77 199 aa17.74■□□□□ 0.43
HMGN1-206ENST00000431390 SLCO1B7G3V0H7 640 aa17.74■□□□□ 0.43
HMGN1-206ENST00000431390 MYO1CO00159 1063 aa17.74■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms