RNA–Protein interactions for RNA: ENST00000430889.2

HOXC4-202, Transcript of homeobox C4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC4, Length 1,666 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC4-202ENST00000430889 ACPTQ9BZG2 426 aa13.63□□□□□ -0.23
HOXC4-202ENST00000430889 CLMPQ9H6B4 373 aa13.63□□□□□ -0.23
HOXC4-202ENST00000430889 RPF2Q9H7B2 306 aaKnown RBP13.63□□□□□ -0.23
HOXC4-202ENST00000430889 LRTM1Q9HBL6 345 aa13.63□□□□□ -0.23
HOXC4-202ENST00000430889 ARL15Q9NXU5 204 aa13.63□□□□□ -0.23
HOXC4-202ENST00000430889 ZNF490Q9ULM2 529 aaPredicted RBP13.63□□□□□ -0.23
HOXC4-202ENST00000430889 PCDHB3Q9Y5E6 796 aa13.63□□□□□ -0.23
HOXC4-202ENST00000430889 AK5Q9Y6K8 562 aa13.63□□□□□ -0.23
HOXC4-202ENST00000430889 MYO7AQ13402 2215 aa13.63□□□□□ -0.23
HOXC4-202ENST00000430889 PRRC2BQ5JSZ5 2229 aaKnown RBP13.63□□□□□ -0.23
HOXC4-202ENST00000430889 TRBV5-3A0A0A0MS03 114 aa13.63□□□□□ -0.23
HOXC4-202ENST00000430889 LINC01553A4QN01 128 aa13.63□□□□□ -0.23
HOXC4-202ENST00000430889 SOCS2O14508 198 aa13.63□□□□□ -0.23
HOXC4-202ENST00000430889 KPNA5O15131 536 aa13.63□□□□□ -0.23
HOXC4-202ENST00000430889 XYLBO75191 536 aa13.63□□□□□ -0.23
HOXC4-202ENST00000430889 PAPLNO95428 1278 aa13.63□□□□□ -0.23
HOXC4-202ENST00000430889 CYP17A1P05093 508 aa13.63□□□□□ -0.23
HOXC4-202ENST00000430889 SRPRAP08240 638 aaKnown RBP13.63□□□□□ -0.23
HOXC4-202ENST00000430889 UMPSP11172 480 aa13.63□□□□□ -0.23
HOXC4-202ENST00000430889 PSMA4P25789 261 aaKnown RBP13.63□□□□□ -0.23
HOXC4-202ENST00000430889 MMP12P39900 470 aa13.63□□□□□ -0.23
HOXC4-202ENST00000430889 RECQLP46063 649 aaPredicted RBP13.63□□□□□ -0.23
HOXC4-202ENST00000430889 HNMTP50135 292 aa13.63□□□□□ -0.23
HOXC4-202ENST00000430889 CCT8P50990 548 aa13.63□□□□□ -0.23
HOXC4-202ENST00000430889 OR4D2P58180 307 aa13.63□□□□□ -0.23
HOXC4-202ENST00000430889 FPGSQ05932 587 aa13.63□□□□□ -0.23
HOXC4-202ENST00000430889 APOFQ13790 326 aa13.63□□□□□ -0.23
HOXC4-202ENST00000430889 PTGR1Q14914 329 aa13.63□□□□□ -0.23
HOXC4-202ENST00000430889 DHCR24Q15392 516 aa13.63□□□□□ -0.23
HOXC4-202ENST00000430889 LIN52Q52LA3 116 aa13.63□□□□□ -0.23
HOXC4-202ENST00000430889 ZNF805Q5CZA5 627 aa13.63□□□□□ -0.23
HOXC4-202ENST00000430889 ARSIQ5FYB1 569 aa13.63□□□□□ -0.23
HOXC4-202ENST00000430889 NHSL2Q5HYW2 709 aa13.63□□□□□ -0.23
HOXC4-202ENST00000430889 TBCELQ5QJ74 424 aa13.63□□□□□ -0.23
HOXC4-202ENST00000430889 Q6ZVL8 140 aa13.63□□□□□ -0.23
HOXC4-202ENST00000430889 DET1Q7L5Y6 550 aa13.63□□□□□ -0.23
HOXC4-202ENST00000430889 GRASPQ7Z6J2 395 aaPredicted RBP13.63□□□□□ -0.23
HOXC4-202ENST00000430889 KLHDC8AQ8IYD2 350 aa13.63□□□□□ -0.23
HOXC4-202ENST00000430889 MFSD2AQ8NA29 543 aa13.63□□□□□ -0.23
HOXC4-202ENST00000430889 GLB1L3Q8NCI6 653 aaPredicted RBP13.63□□□□□ -0.23
HOXC4-202ENST00000430889 OR8J3Q8NGG0 315 aa13.63□□□□□ -0.23
HOXC4-202ENST00000430889 PHOSPHO2Q8TCD6 241 aa13.63□□□□□ -0.23
HOXC4-202ENST00000430889 HERVK_113Q902F9 699 aa13.63□□□□□ -0.23
HOXC4-202ENST00000430889 GTF2H4Q92759 462 aa13.63□□□□□ -0.23
HOXC4-202ENST00000430889 LRIG1Q96JA1 1093 aa13.63□□□□□ -0.23
HOXC4-202ENST00000430889 VPS35Q96QK1 796 aa13.63□□□□□ -0.23
HOXC4-202ENST00000430889 CIB1Q99828 191 aa13.63□□□□□ -0.23
HOXC4-202ENST00000430889 EPB41L1Q9H4G0 881 aa13.63□□□□□ -0.23
HOXC4-202ENST00000430889 RAD18Q9NS91 495 aa13.63□□□□□ -0.23
HOXC4-202ENST00000430889 C1orf109Q9NX04 203 aa13.63□□□□□ -0.23
HOXC4-202ENST00000430889 IL36AQ9UHA7 158 aa13.63□□□□□ -0.23
HOXC4-202ENST00000430889 EIF3LQ9Y262 564 aaKnown RBP13.63□□□□□ -0.23
HOXC4-202ENST00000430889 CHD7Q9P2D1 2997 aa13.62□□□□□ -0.23
HOXC4-202ENST00000430889 C2orf16Q68DN1 1984 aa13.62□□□□□ -0.23
HOXC4-202ENST00000430889 SLC9A3R1O14745 358 aaPredicted RBP13.62□□□□□ -0.23
HOXC4-202ENST00000430889 ACOX3O15254 700 aa13.62□□□□□ -0.23
HOXC4-202ENST00000430889 HOXC11O43248 304 aaPredicted RBP13.62□□□□□ -0.23
HOXC4-202ENST00000430889 TLL1O43897 1013 aa13.62□□□□□ -0.23
HOXC4-202ENST00000430889 MTX2O75431 263 aa13.62□□□□□ -0.23
HOXC4-202ENST00000430889 PABPC4LP0CB38 370 aaKnown RBP13.62□□□□□ -0.23
HOXC4-202ENST00000430889 HOXB9P17482 250 aaPredicted RBP13.62□□□□□ -0.23
HOXC4-202ENST00000430889 CKMT2P17540 419 aa13.62□□□□□ -0.23
HOXC4-202ENST00000430889 WEE1P30291 646 aa13.62□□□□□ -0.23
HOXC4-202ENST00000430889 ETV3P41162 512 aa13.62□□□□□ -0.23
HOXC4-202ENST00000430889 AP1S2P56377 157 aa13.62□□□□□ -0.23
HOXC4-202ENST00000430889 HSPA14Q0VDF9 509 aa13.62□□□□□ -0.23
HOXC4-202ENST00000430889 ATP6AP1Q15904 470 aa13.62□□□□□ -0.23
HOXC4-202ENST00000430889 NRF1Q16656 503 aa13.62□□□□□ -0.23
HOXC4-202ENST00000430889 ZNF658BQ4V348 819 aaPredicted RBP13.62□□□□□ -0.23
HOXC4-202ENST00000430889 SPRED1Q7Z699 444 aa13.62□□□□□ -0.23
HOXC4-202ENST00000430889 PROSER1Q86XN7 944 aa13.62□□□□□ -0.23
HOXC4-202ENST00000430889 MSRB3Q8IXL7 192 aa13.62□□□□□ -0.23
HOXC4-202ENST00000430889 LIX1Q8N485 282 aa13.62□□□□□ -0.23
HOXC4-202ENST00000430889 NAT16Q8N8M0 369 aa13.62□□□□□ -0.23
HOXC4-202ENST00000430889 SLC13A3Q8WWT9 602 aa13.62□□□□□ -0.23
HOXC4-202ENST00000430889 FBXL8Q96CD0 374 aa13.62□□□□□ -0.23
HOXC4-202ENST00000430889 TIFAQ96CG3 184 aa13.62□□□□□ -0.23
HOXC4-202ENST00000430889 RSPRY1Q96DX4 576 aa13.62□□□□□ -0.23
HOXC4-202ENST00000430889 FCRL1Q96LA6 429 aa13.62□□□□□ -0.23
HOXC4-202ENST00000430889 CCDC115Q96NT0 180 aa13.62□□□□□ -0.23
HOXC4-202ENST00000430889 GBP5Q96PP8 586 aa13.62□□□□□ -0.23
HOXC4-202ENST00000430889 P2RY13Q9BPV8 354 aa13.62□□□□□ -0.23
HOXC4-202ENST00000430889 YIPF3Q9GZM5 350 aa13.62□□□□□ -0.23
HOXC4-202ENST00000430889 MTG2Q9H4K7 406 aa13.62□□□□□ -0.23
HOXC4-202ENST00000430889 ARHGAP10A1A4S6 786 aa13.61□□□□□ -0.23
HOXC4-202ENST00000430889 AREL1O15033 823 aa13.61□□□□□ -0.23
HOXC4-202ENST00000430889 SPINT1O43278 529 aa13.61□□□□□ -0.23
HOXC4-202ENST00000430889 AKAP10O43572 662 aa13.61□□□□□ -0.23
HOXC4-202ENST00000430889 PDYNP01213 254 aa13.61□□□□□ -0.23
HOXC4-202ENST00000430889 KRT6AP02538 564 aa13.61□□□□□ -0.23
HOXC4-202ENST00000430889 KRT6BP04259 564 aa13.61□□□□□ -0.23
HOXC4-202ENST00000430889 ASLP04424 464 aa13.61□□□□□ -0.23
HOXC4-202ENST00000430889 BCKDHAP12694 445 aa13.61□□□□□ -0.23
HOXC4-202ENST00000430889 ACPPP15309 386 aa13.61□□□□□ -0.23
HOXC4-202ENST00000430889 NCK1P16333 377 aa13.61□□□□□ -0.23
HOXC4-202ENST00000430889 IL10P22301 178 aa13.61□□□□□ -0.23
HOXC4-202ENST00000430889 AKT1P31749 480 aa13.61□□□□□ -0.23
HOXC4-202ENST00000430889 KRT6CP48668 564 aa13.61□□□□□ -0.23
HOXC4-202ENST00000430889 GAB4Q2WGN9 574 aa13.61□□□□□ -0.23
HOXC4-202ENST00000430889 PTCHD3Q3KNS1 767 aa13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms