RNA–Protein interactions for RNA: ENST00000429895.5

PTPRF-206, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 1 (best)

Gene PTPRF, Length 6,312 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-206ENST00000429895 RASSF5Q8WWW0 418 aa15.13■□□□□ 0.01
PTPRF-206ENST00000429895 SPOCK2Q92563 424 aa15.13■□□□□ 0.01
PTPRF-206ENST00000429895 PIK3R3Q92569 461 aa15.13■□□□□ 0.01
PTPRF-206ENST00000429895 TOP1MTQ969P6 601 aa15.13■□□□□ 0.01
PTPRF-206ENST00000429895 MGME1Q9BQP7 344 aa15.13■□□□□ 0.01
PTPRF-206ENST00000429895 NOX1Q9Y5S8 564 aa15.13■□□□□ 0.01
PTPRF-206ENST00000429895 CXCR6O00574 342 aa15.13■□□□□ 0.01
PTPRF-206ENST00000429895 PGRP06401 933 aa15.13■□□□□ 0.01
PTPRF-206ENST00000429895 ALPIP09923 528 aa15.13■□□□□ 0.01
PTPRF-206ENST00000429895 MTPNP58546 118 aa15.13■□□□□ 0.01
PTPRF-206ENST00000429895 DAOAP59103 153 aa15.13■□□□□ 0.01
PTPRF-206ENST00000429895 E2F2Q14209 437 aa15.13■□□□□ 0.01
PTPRF-206ENST00000429895 CCL14Q16627 93 aa15.13■□□□□ 0.01
PTPRF-206ENST00000429895 LAPTM4BQ86VI4 370 aa15.13■□□□□ 0.01
PTPRF-206ENST00000429895 TFAP2BQ92481 460 aa15.13■□□□□ 0.01
PTPRF-206ENST00000429895 TBL1XR1Q9BZK7 514 aa15.13■□□□□ 0.01
PTPRF-206ENST00000429895 B3GNT4Q9C0J1 378 aa15.13■□□□□ 0.01
PTPRF-206ENST00000429895 A0A0J9YVX5 310 aa15.13■□□□□ 0.01
PTPRF-206ENST00000429895 E7ENX8 843 aa15.13■□□□□ 0.01
PTPRF-206ENST00000429895 PCDHGA12O60330 932 aa15.13■□□□□ 0.01
PTPRF-206ENST00000429895 CDKN1CP49918 316 aaPredicted RBP15.13■□□□□ 0.01
PTPRF-206ENST00000429895 CYP27C1Q4G0S4 372 aa15.13■□□□□ 0.01
PTPRF-206ENST00000429895 GJD3Q8N144 294 aa15.13■□□□□ 0.01
PTPRF-206ENST00000429895 ZSWIM3Q96MP5 696 aa15.13■□□□□ 0.01
PTPRF-206ENST00000429895 KXD1Q9BQD3 176 aa15.13■□□□□ 0.01
PTPRF-206ENST00000429895 SNX7Q9UNH6 387 aa15.13■□□□□ 0.01
PTPRF-206ENST00000429895 MAP2P11137 1827 aaKnown RBP15.13■□□□□ 0.01
PTPRF-206ENST00000429895 REM1O75628 298 aa15.13■□□□□ 0.01
PTPRF-206ENST00000429895 AGXTP21549 392 aa15.13■□□□□ 0.01
PTPRF-206ENST00000429895 HTR7P34969 479 aa15.13■□□□□ 0.01
PTPRF-206ENST00000429895 FAM174BQ3ZCQ3 159 aa15.13■□□□□ 0.01
PTPRF-206ENST00000429895 FAM92BQ6ZTR7 304 aa15.13■□□□□ 0.01
PTPRF-206ENST00000429895 BRSK1Q8TDC3 778 aa15.13■□□□□ 0.01
PTPRF-206ENST00000429895 SLC22A17Q8WUG5 538 aa15.13■□□□□ 0.01
PTPRF-206ENST00000429895 DGAT2Q96PD7 388 aa15.13■□□□□ 0.01
PTPRF-206ENST00000429895 FEM1AQ9BSK4 669 aa15.13■□□□□ 0.01
PTPRF-206ENST00000429895 IL1RAPQ9NPH3 570 aa15.13■□□□□ 0.01
PTPRF-206ENST00000429895 ZNF446Q9NWS9 450 aa15.13■□□□□ 0.01
PTPRF-206ENST00000429895 OR51F1A6NGY5 319 aa15.13■□□□□ 0.01
PTPRF-206ENST00000429895 CPNE3O75131 537 aaKnown RBP15.13■□□□□ 0.01
PTPRF-206ENST00000429895 PTGER3P43115 390 aa15.13■□□□□ 0.01
PTPRF-206ENST00000429895 GPR68Q15743 365 aa15.13■□□□□ 0.01
PTPRF-206ENST00000429895 ABHD13Q7L211 337 aa15.13■□□□□ 0.01
PTPRF-206ENST00000429895 FAM156AQ8NDB6 213 aa15.13■□□□□ 0.01
PTPRF-206ENST00000429895 PHC3Q8NDX5 983 aa15.13■□□□□ 0.01
PTPRF-206ENST00000429895 RIOK2Q9BVS4 552 aaKnown RBP15.13■□□□□ 0.01
PTPRF-206ENST00000429895 COL20A1Q9P218 1284 aa15.13■□□□□ 0.01
PTPRF-206ENST00000429895 ROBO3Q96MS0 1386 aa15.13■□□□□ 0.01
PTPRF-206ENST00000429895 EOMESO95936 686 aa15.12■□□□□ 0.01
PTPRF-206ENST00000429895 TGFB1P01137 390 aa15.12■□□□□ 0.01
PTPRF-206ENST00000429895 IFI44LQ53G44 452 aa15.12■□□□□ 0.01
PTPRF-206ENST00000429895 YJEFN3A6XGL0 299 aa15.12■□□□□ 0.01
PTPRF-206ENST00000429895 ADAMDEC1O15204 470 aa15.12■□□□□ 0.01
PTPRF-206ENST00000429895 OR1I1O60431 355 aa15.12■□□□□ 0.01
PTPRF-206ENST00000429895 UGT1A9O60656 530 aa15.12■□□□□ 0.01
PTPRF-206ENST00000429895 S100A6P06703 90 aa15.12■□□□□ 0.01
PTPRF-206ENST00000429895 UGT1A6P19224 532 aa15.12■□□□□ 0.01
PTPRF-206ENST00000429895 UGT1A1P22309 533 aa15.12■□□□□ 0.01
PTPRF-206ENST00000429895 UGT1A4P22310 534 aa15.12■□□□□ 0.01
PTPRF-206ENST00000429895 ECHS1P30084 290 aa15.12■□□□□ 0.01
PTPRF-206ENST00000429895 UGT1A3P35503 534 aa15.12■□□□□ 0.01
PTPRF-206ENST00000429895 EIPR1Q53HC9 387 aa15.12■□□□□ 0.01
PTPRF-206ENST00000429895 MLIPQ5VWP3 458 aa15.12■□□□□ 0.01
PTPRF-206ENST00000429895 PYCR2Q96C36 320 aa15.12■□□□□ 0.01
PTPRF-206ENST00000429895 C11orf49Q9H6J7 331 aa15.12■□□□□ 0.01
PTPRF-206ENST00000429895 UGT1A7Q9HAW7 530 aa15.12■□□□□ 0.01
PTPRF-206ENST00000429895 UGT1A10Q9HAW8 530 aa15.12■□□□□ 0.01
PTPRF-206ENST00000429895 UGT1A8Q9HAW9 530 aa15.12■□□□□ 0.01
PTPRF-206ENST00000429895 GKN1Q9NS71 199 aa15.12■□□□□ 0.01
PTPRF-206ENST00000429895 C1orf109Q9NX04 203 aa15.12■□□□□ 0.01
PTPRF-206ENST00000429895 PCDHGC3Q9UN70 934 aa15.12■□□□□ 0.01
PTPRF-206ENST00000429895 PCDHB11Q9Y5F2 797 aa15.12■□□□□ 0.01
PTPRF-206ENST00000429895 COMMD3-BMI1R4GMX3 469 aa15.12■□□□□ 0.01
PTPRF-206ENST00000429895 C9J4A7 227 aa15.12■□□□□ 0.01
PTPRF-206ENST00000429895 TRAPPC6AO75865 159 aa15.12■□□□□ 0.01
PTPRF-206ENST00000429895 SLC1A2P43004 574 aa15.12■□□□□ 0.01
PTPRF-206ENST00000429895 RPS9P46781 194 aaKnown RBP15.12■□□□□ 0.01
PTPRF-206ENST00000429895 RASGEF1BQ0VAM2 473 aa15.12■□□□□ 0.01
PTPRF-206ENST00000429895 TMEM164Q5U3C3 297 aa15.12■□□□□ 0.01
PTPRF-206ENST00000429895 CBR4Q8N4T8 237 aa15.12■□□□□ 0.01
PTPRF-206ENST00000429895 MED28Q9H204 178 aa15.12■□□□□ 0.01
PTPRF-206ENST00000429895 CENPMQ9NSP4 180 aa15.12■□□□□ 0.01
PTPRF-206ENST00000429895 SMPD3Q9NY59 655 aaPredicted RBP15.12■□□□□ 0.01
PTPRF-206ENST00000429895 PFDN2Q9UHV9 154 aa15.12■□□□□ 0.01
PTPRF-206ENST00000429895 NDUFS4O43181 175 aa15.12■□□□□ 0.01
PTPRF-206ENST00000429895 TNFP01375 233 aa15.12■□□□□ 0.01
PTPRF-206ENST00000429895 PRH1P02810 166 aa15.12■□□□□ 0.01
PTPRF-206ENST00000429895 CXCR1P25024 350 aa15.12■□□□□ 0.01
PTPRF-206ENST00000429895 CLEC12AQ5QGZ9 265 aa15.12■□□□□ 0.01
PTPRF-206ENST00000429895 SH3PXD2AQ5TCZ1 1133 aa15.12■□□□□ 0.01
PTPRF-206ENST00000429895 PDE12Q6L8Q7 609 aaKnown RBP15.12■□□□□ 0.01
PTPRF-206ENST00000429895 HFE2Q6ZVN8 426 aa15.12■□□□□ 0.01
PTPRF-206ENST00000429895 ZZZ3Q8IYH5 903 aa15.12■□□□□ 0.01
PTPRF-206ENST00000429895 OR13C4Q8NGS5 318 aa15.12■□□□□ 0.01
PTPRF-206ENST00000429895 CHIAQ9BZP6 476 aa15.12■□□□□ 0.01
PTPRF-206ENST00000429895 MKKSQ9NPJ1 570 aaPredicted RBP15.12■□□□□ 0.01
PTPRF-206ENST00000429895 PCDH7O60245 1069 aa15.12■□□□□ 0.01
PTPRF-206ENST00000429895 SHOX2O60902 331 aaPredicted RBP15.12■□□□□ 0.01
PTPRF-206ENST00000429895 F7P08709 466 aaPredicted RBP15.12■□□□□ 0.01
PTPRF-206ENST00000429895 RPS14P62263 151 aaKnown RBP15.12■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms