RNA–Protein interactions for RNA: ENST00000429846.1

MSH5-208, Transcript of mutS homolog 5, humanhuman

TSL 3

Gene MSH5, Length 616 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-208ENST00000429846 PROKR1Q8TCW9 393 aa14.4□□□□□ -0.1
MSH5-208ENST00000429846 SGSM3Q96HU1 749 aa14.4□□□□□ -0.1
MSH5-208ENST00000429846 SMAD5Q99717 465 aaKnown RBP14.4□□□□□ -0.1
MSH5-208ENST00000429846 NUDT9Q9BW91 350 aa14.4□□□□□ -0.1
MSH5-208ENST00000429846 SLC29A3Q9BZD2 475 aa14.4□□□□□ -0.1
MSH5-208ENST00000429846 XKR8Q9H6D3 395 aa14.4□□□□□ -0.1
MSH5-208ENST00000429846 SMARCAL1Q9NZC9 954 aa14.4□□□□□ -0.1
MSH5-208ENST00000429846 C5AR2Q9P296 337 aa14.4□□□□□ -0.1
MSH5-208ENST00000429846 AMFRQ9UKV5 643 aa14.4□□□□□ -0.1
MSH5-208ENST00000429846 SRPK3Q9UPE1 567 aa14.4□□□□□ -0.1
MSH5-208ENST00000429846 DUSP10Q9Y6W6 482 aa14.4□□□□□ -0.1
MSH5-208ENST00000429846 PCM1Q15154 2024 aa14.4□□□□□ -0.1
MSH5-208ENST00000429846 ICE1Q9Y2F5 2266 aa14.4□□□□□ -0.1
MSH5-208ENST00000429846 A0A0J9YY10 115 aa14.39□□□□□ -0.11
MSH5-208ENST00000429846 GRID2IPA4D2P6 1211 aa14.39□□□□□ -0.11
MSH5-208ENST00000429846 MROH6A6NGR9 719 aa14.39□□□□□ -0.11
MSH5-208ENST00000429846 KLHL41O60662 606 aa14.39□□□□□ -0.11
MSH5-208ENST00000429846 OR2B3O76000 313 aa14.39□□□□□ -0.11
MSH5-208ENST00000429846 METTL18O95568 372 aa14.39□□□□□ -0.11
MSH5-208ENST00000429846 OR56A5P0C7T3 313 aa14.39□□□□□ -0.11
MSH5-208ENST00000429846 PRSS56P0CW18 603 aa14.39□□□□□ -0.11
MSH5-208ENST00000429846 UGT2B7P16662 529 aa14.39□□□□□ -0.11
MSH5-208ENST00000429846 ACADLP28330 430 aa14.39□□□□□ -0.11
MSH5-208ENST00000429846 KLF1Q13351 362 aaPredicted RBP14.39□□□□□ -0.11
MSH5-208ENST00000429846 ATP1A4Q13733 1029 aa14.39□□□□□ -0.11
MSH5-208ENST00000429846 SSPNQ14714 243 aa14.39□□□□□ -0.11
MSH5-208ENST00000429846 SYTL3Q4VX76 610 aa14.39□□□□□ -0.11
MSH5-208ENST00000429846 VWA5B1Q5TIE3 1220 aa14.39□□□□□ -0.11
MSH5-208ENST00000429846 LYPLAL1Q5VWZ2 237 aa14.39□□□□□ -0.11
MSH5-208ENST00000429846 PEX26Q7Z412 305 aa14.39□□□□□ -0.11
MSH5-208ENST00000429846 SYCE1Q8N0S2 351 aa14.39□□□□□ -0.11
MSH5-208ENST00000429846 TXLNBQ8N3L3 684 aa14.39□□□□□ -0.11
MSH5-208ENST00000429846 OR5AR1Q8NGP9 310 aa14.39□□□□□ -0.11
MSH5-208ENST00000429846 ELMO1Q92556 727 aa14.39□□□□□ -0.11
MSH5-208ENST00000429846 PNPLA2Q96AD5 504 aa14.39□□□□□ -0.11
MSH5-208ENST00000429846 MRFAP1L1Q96HT8 127 aa14.39□□□□□ -0.11
MSH5-208ENST00000429846 OR2A14Q96R47 310 aa14.39□□□□□ -0.11
MSH5-208ENST00000429846 TTC1Q99614 292 aa14.39□□□□□ -0.11
MSH5-208ENST00000429846 LACRTQ9GZZ8 138 aa14.39□□□□□ -0.11
MSH5-208ENST00000429846 KLHL25Q9H0H3 589 aa14.39□□□□□ -0.11
MSH5-208ENST00000429846 SLAMF7Q9NQ25 335 aa14.39□□□□□ -0.11
MSH5-208ENST00000429846 CUEDC1Q9NWM3 386 aaPredicted RBP14.39□□□□□ -0.11
MSH5-208ENST00000429846 NUP210LQ5VU65 1888 aa14.39□□□□□ -0.11
MSH5-208ENST00000429846 SNRNP200O75643 2136 aaKnown RBP14.39□□□□□ -0.11
MSH5-208ENST00000429846 SLC5A10A0PJK1 596 aa14.38□□□□□ -0.11
MSH5-208ENST00000429846 CCDC78A2IDD5 438 aa14.38□□□□□ -0.11
MSH5-208ENST00000429846 H3BMH7 237 aa14.38□□□□□ -0.11
MSH5-208ENST00000429846 ZNF185O15231 689 aa14.38□□□□□ -0.11
MSH5-208ENST00000429846 ZSCAN9O15535 394 aaPredicted RBP14.38□□□□□ -0.11
MSH5-208ENST00000429846 KLF7O75840 302 aaPredicted RBP14.38□□□□□ -0.11
MSH5-208ENST00000429846 GAS8O95995 478 aa14.38□□□□□ -0.11
MSH5-208ENST00000429846 CHRM5P08912 532 aaPredicted RBP14.38□□□□□ -0.11
MSH5-208ENST00000429846 TPH1P17752 444 aa14.38□□□□□ -0.11
MSH5-208ENST00000429846 FOXN2P32314 431 aa14.38□□□□□ -0.11
MSH5-208ENST00000429846 FOLR3P41439 243 aa14.38□□□□□ -0.11
MSH5-208ENST00000429846 GABRA4P48169 554 aa14.38□□□□□ -0.11
MSH5-208ENST00000429846 GDF10P55107 478 aa14.38□□□□□ -0.11
MSH5-208ENST00000429846 CDH17Q12864 832 aa14.38□□□□□ -0.11
MSH5-208ENST00000429846 KIR2DS3Q14952 304 aa14.38□□□□□ -0.11
MSH5-208ENST00000429846 INPP5JQ15735 1006 aaPredicted RBP14.38□□□□□ -0.11
MSH5-208ENST00000429846 SLC5A12Q1EHB4 618 aa14.38□□□□□ -0.11
MSH5-208ENST00000429846 FAM69BQ5VUD6 431 aa14.38□□□□□ -0.11
MSH5-208ENST00000429846 SLC6A19Q695T7 634 aa14.38□□□□□ -0.11
MSH5-208ENST00000429846 TLDC1Q6P9B6 456 aa14.38□□□□□ -0.11
MSH5-208ENST00000429846 UNC5AQ6ZN44 842 aa14.38□□□□□ -0.11
MSH5-208ENST00000429846 MRGPREQ86SM8 312 aa14.38□□□□□ -0.11
MSH5-208ENST00000429846 SLC35B2Q8TB61 432 aa14.38□□□□□ -0.11
MSH5-208ENST00000429846 FER1L6-AS2Q96M78 137 aa14.38□□□□□ -0.11
MSH5-208ENST00000429846 GBP5Q96PP8 586 aa14.38□□□□□ -0.11
MSH5-208ENST00000429846 NRTNQ99748 197 aa14.38□□□□□ -0.11
MSH5-208ENST00000429846 TMEM121Q9BTD3 319 aa14.38□□□□□ -0.11
MSH5-208ENST00000429846 AP1M1Q9BXS5 423 aa14.38□□□□□ -0.11
MSH5-208ENST00000429846 FAM60AQ9NP50 221 aa14.38□□□□□ -0.11
MSH5-208ENST00000429846 GPN3Q9UHW5 284 aaPredicted RBP14.38□□□□□ -0.11
MSH5-208ENST00000429846 RIMKLBQ9ULI2 386 aa14.38□□□□□ -0.11
MSH5-208ENST00000429846 REXO2Q9Y3B8 237 aaKnown RBP14.38□□□□□ -0.11
MSH5-208ENST00000429846 ANKRD12Q6UB98 2062 aa14.37□□□□□ -0.11
MSH5-208ENST00000429846 HEATR9A2RTY3 570 aa14.37□□□□□ -0.11
MSH5-208ENST00000429846 ALPPP05187 535 aa14.37□□□□□ -0.11
MSH5-208ENST00000429846 DCDP81605 110 aaKnown RBP14.37□□□□□ -0.11
MSH5-208ENST00000429846 ZIC1Q15915 447 aa14.37□□□□□ -0.11
MSH5-208ENST00000429846 AFTPHQ6ULP2 937 aa14.37□□□□□ -0.11
MSH5-208ENST00000429846 RAD9BQ6WBX8 426 aa14.37□□□□□ -0.11
MSH5-208ENST00000429846 KIAA1328Q86T90 577 aa14.37□□□□□ -0.11
MSH5-208ENST00000429846 Q8NA96 180 aa14.37□□□□□ -0.11
MSH5-208ENST00000429846 CLEC1AQ8NC01 280 aa14.37□□□□□ -0.11
MSH5-208ENST00000429846 OR2Y1Q8NGV0 311 aa14.37□□□□□ -0.11
MSH5-208ENST00000429846 FLVCR1-AS1Q8TAF5 88 aa14.37□□□□□ -0.11
MSH5-208ENST00000429846 SSC4DQ8WTU2 575 aa14.37□□□□□ -0.11
MSH5-208ENST00000429846 TSSK1BQ9BXA7 367 aa14.37□□□□□ -0.11
MSH5-208ENST00000429846 TXLNGQ9NUQ3 528 aa14.37□□□□□ -0.11
MSH5-208ENST00000429846 NDOR1Q9UHB4 597 aa14.37□□□□□ -0.11
MSH5-208ENST00000429846 TDRKHQ9Y2W6 561 aaKnown RBP14.37□□□□□ -0.11
MSH5-208ENST00000429846 PRSS21Q9Y6M0 314 aa14.37□□□□□ -0.11
MSH5-208ENST00000429846 PCSK5Q92824 1860 aa14.37□□□□□ -0.11
MSH5-208ENST00000429846 CCDC88CQ9P219 2028 aa14.37□□□□□ -0.11
MSH5-208ENST00000429846 A6NL46 340 aa14.36□□□□□ -0.11
MSH5-208ENST00000429846 PEX12O00623 359 aa14.36□□□□□ -0.11
MSH5-208ENST00000429846 IPO13O94829 963 aaKnown RBP14.36□□□□□ -0.11
MSH5-208ENST00000429846 RPN2P04844 631 aa14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 92.8 ms