RNA–Protein interactions for RNA: ENST00000429747.5

CPNE4-201, Transcript of copine 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPNE4, Length 4,184 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-201ENST00000429747 KPNA3O00505 521 aaPredicted RBP12.39□□□□□ -0.43
CPNE4-201ENST00000429747 SLC22A1O15245 554 aa12.39□□□□□ -0.43
CPNE4-201ENST00000429747 PQBP1O60828 265 aaKnown RBP12.39□□□□□ -0.43
CPNE4-201ENST00000429747 CCNKO75909 580 aa12.39□□□□□ -0.43
CPNE4-201ENST00000429747 GSRP00390 522 aa12.39□□□□□ -0.43
CPNE4-201ENST00000429747 GRK3P35626 688 aa12.39□□□□□ -0.43
CPNE4-201ENST00000429747 MAPK8P45983 427 aa12.39□□□□□ -0.43
CPNE4-201ENST00000429747 NUDT6P53370 316 aa12.39□□□□□ -0.43
CPNE4-201ENST00000429747 TMBIM6P55061 237 aa12.39□□□□□ -0.43
CPNE4-201ENST00000429747 CDH12P55289 794 aa12.39□□□□□ -0.43
CPNE4-201ENST00000429747 LYPLAL1Q5VWZ2 237 aa12.39□□□□□ -0.43
CPNE4-201ENST00000429747 SPRYD7Q5W111 196 aa12.39□□□□□ -0.43
CPNE4-201ENST00000429747 PTCHD4Q6ZW05 846 aa12.39□□□□□ -0.43
CPNE4-201ENST00000429747 CNTN4Q8IWV2 1026 aa12.39□□□□□ -0.43
CPNE4-201ENST00000429747 SLC15A4Q8N697 577 aa12.39□□□□□ -0.43
CPNE4-201ENST00000429747 KRTCAP2Q8N6L1 136 aa12.39□□□□□ -0.43
CPNE4-201ENST00000429747 ENKURQ8TC29 256 aa12.39□□□□□ -0.43
CPNE4-201ENST00000429747 NPLQ9BXD5 320 aaPredicted RBP12.39□□□□□ -0.43
CPNE4-201ENST00000429747 AASDHPPTQ9NRN7 309 aa12.39□□□□□ -0.43
CPNE4-201ENST00000429747 AGPAT4Q9NRZ5 378 aa12.39□□□□□ -0.43
CPNE4-201ENST00000429747 SLAMF8Q9P0V8 285 aa12.39□□□□□ -0.43
CPNE4-201ENST00000429747 GPC6Q9Y625 555 aaPredicted RBP12.39□□□□□ -0.43
CPNE4-201ENST00000429747 A0A0U1RQS6 177 aa12.38□□□□□ -0.43
CPNE4-201ENST00000429747 EEDO75530 441 aaKnown RBP12.38□□□□□ -0.43
CPNE4-201ENST00000429747 C1QAP02745 245 aa12.38□□□□□ -0.43
CPNE4-201ENST00000429747 PRKAR2AP13861 404 aaKnown RBP12.38□□□□□ -0.43
CPNE4-201ENST00000429747 CDKN1CP49918 316 aaPredicted RBP12.38□□□□□ -0.43
CPNE4-201ENST00000429747 OR2T5Q6IEZ7 315 aa12.38□□□□□ -0.43
CPNE4-201ENST00000429747 ENPP6Q6UWR7 440 aa12.38□□□□□ -0.43
CPNE4-201ENST00000429747 HS3ST5Q8IZT8 346 aa12.38□□□□□ -0.43
CPNE4-201ENST00000429747 OR13J1Q8NGT2 312 aa12.38□□□□□ -0.43
CPNE4-201ENST00000429747 OR2T29Q8NH02 315 aa12.38□□□□□ -0.43
CPNE4-201ENST00000429747 ZNF382Q96SR6 550 aa12.38□□□□□ -0.43
CPNE4-201ENST00000429747 SLC30A3Q99726 388 aa12.38□□□□□ -0.43
CPNE4-201ENST00000429747 TCF25Q9BQ70 676 aa12.38□□□□□ -0.43
CPNE4-201ENST00000429747 ACAT2Q9BWD1 397 aa12.38□□□□□ -0.43
CPNE4-201ENST00000429747 SGK2Q9HBY8 427 aa12.38□□□□□ -0.43
CPNE4-201ENST00000429747 KCNE2Q9Y6J6 123 aa12.38□□□□□ -0.43
CPNE4-201ENST00000429747 ARFGEF1Q9Y6D6 1849 aa12.38□□□□□ -0.43
CPNE4-201ENST00000429747 OR2AG2A6NM03 316 aa12.38□□□□□ -0.43
CPNE4-201ENST00000429747 PSMD11O00231 422 aa12.38□□□□□ -0.43
CPNE4-201ENST00000429747 CLIC1O00299 241 aa12.38□□□□□ -0.43
CPNE4-201ENST00000429747 OR10H3O60404 316 aa12.38□□□□□ -0.43
CPNE4-201ENST00000429747 CAPN15O75808 1086 aa12.38□□□□□ -0.43
CPNE4-201ENST00000429747 ANXA4P09525 319 aaPredicted RBP12.38□□□□□ -0.43
CPNE4-201ENST00000429747 IMPDH2P12268 514 aa12.38□□□□□ -0.43
CPNE4-201ENST00000429747 IGFBP6P24592 240 aaPredicted RBP12.38□□□□□ -0.43
CPNE4-201ENST00000429747 MAGEA12P43365 314 aa12.38□□□□□ -0.43
CPNE4-201ENST00000429747 SREBF2Q12772 1141 aa12.38□□□□□ -0.43
CPNE4-201ENST00000429747 C18orf21Q32NC0 220 aaPredicted RBP12.38□□□□□ -0.43
CPNE4-201ENST00000429747 TRIQKQ629K1 86 aa12.38□□□□□ -0.43
CPNE4-201ENST00000429747 KANK2Q63ZY3 851 aa12.38□□□□□ -0.43
CPNE4-201ENST00000429747 ERICH5Q6P6B1 374 aa12.38□□□□□ -0.43
CPNE4-201ENST00000429747 ZNF280BQ86YH2 543 aa12.38□□□□□ -0.43
CPNE4-201ENST00000429747 SLC34A3Q8N130 599 aa12.38□□□□□ -0.43
CPNE4-201ENST00000429747 GTPBP3Q969Y2 492 aaKnown RBP12.38□□□□□ -0.43
CPNE4-201ENST00000429747 ISL2Q96A47 359 aa12.38□□□□□ -0.43
CPNE4-201ENST00000429747 C1orf74Q96LT6 269 aa12.38□□□□□ -0.43
CPNE4-201ENST00000429747 MRPL9Q9BYD2 267 aaKnown RBP12.38□□□□□ -0.43
CPNE4-201ENST00000429747 NLE1Q9NVX2 485 aaPredicted RBP12.38□□□□□ -0.43
CPNE4-201ENST00000429747 TOR4AQ9NXH8 423 aa12.38□□□□□ -0.43
CPNE4-201ENST00000429747 TMA7Q9Y2S6 64 aaKnown RBP12.38□□□□□ -0.43
CPNE4-201ENST00000429747 SLC38A8A6NNN8 435 aa12.38□□□□□ -0.43
CPNE4-201ENST00000429747 HNRNPCL2B2RXH8 293 aa12.38□□□□□ -0.43
CPNE4-201ENST00000429747 ITGB1P05556 798 aa12.38□□□□□ -0.43
CPNE4-201ENST00000429747 TSPAN19P0C672 248 aa12.38□□□□□ -0.43
CPNE4-201ENST00000429747 ELNP15502 786 aa12.38□□□□□ -0.43
CPNE4-201ENST00000429747 MAP2K4P45985 399 aa12.38□□□□□ -0.43
CPNE4-201ENST00000429747 PRKAG1P54619 331 aa12.38□□□□□ -0.43
CPNE4-201ENST00000429747 POLR2LP62875 67 aaKnown RBP12.38□□□□□ -0.43
CPNE4-201ENST00000429747 TUBA3CQ13748 450 aa12.38□□□□□ -0.43
CPNE4-201ENST00000429747 TMEM236Q5W0B7 351 aa12.38□□□□□ -0.43
CPNE4-201ENST00000429747 DTWD1Q8N5C7 304 aa12.38□□□□□ -0.43
CPNE4-201ENST00000429747 WDR36Q8NI36 951 aaKnown RBP12.38□□□□□ -0.43
CPNE4-201ENST00000429747 HDAC2Q92769 488 aaKnown RBP12.38□□□□□ -0.43
CPNE4-201ENST00000429747 KCNJ9Q92806 393 aa12.38□□□□□ -0.43
CPNE4-201ENST00000429747 CLP1Q92989 425 aaKnown RBP12.38□□□□□ -0.43
CPNE4-201ENST00000429747 POP5Q969H6 163 aaKnown RBP12.38□□□□□ -0.43
CPNE4-201ENST00000429747 FUBP1Q96AE4 644 aaKnown RBP12.38□□□□□ -0.43
CPNE4-201ENST00000429747 DCSTAMPQ9H295 470 aa12.38□□□□□ -0.43
CPNE4-201ENST00000429747 FAIMQ9NVQ4 179 aa12.38□□□□□ -0.43
CPNE4-201ENST00000429747 CRNNQ9UBG3 495 aaPredicted RBP12.38□□□□□ -0.43
CPNE4-201ENST00000429747 USP22Q9UPT9 525 aa12.38□□□□□ -0.43
CPNE4-201ENST00000429747 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.38□□□□□ -0.43
CPNE4-201ENST00000429747 KPNA5O15131 536 aa12.37□□□□□ -0.43
CPNE4-201ENST00000429747 TMCC2O75069 709 aa12.37□□□□□ -0.43
CPNE4-201ENST00000429747 OPN1SWP03999 348 aa12.37□□□□□ -0.43
CPNE4-201ENST00000429747 MYL12AP19105 171 aa12.37□□□□□ -0.43
CPNE4-201ENST00000429747 HNF4AP41235 474 aa12.37□□□□□ -0.43
CPNE4-201ENST00000429747 BMXP51813 675 aa12.37□□□□□ -0.43
CPNE4-201ENST00000429747 ABRAXAS2Q15018 415 aa12.37□□□□□ -0.43
CPNE4-201ENST00000429747 SCD5Q86SK9 330 aa12.37□□□□□ -0.43
CPNE4-201ENST00000429747 RAB42Q8N4Z0 105 aa12.37□□□□□ -0.43
CPNE4-201ENST00000429747 UPF1Q92900 1129 aaKnown RBP eCLIP12.37□□□□□ -0.43
CPNE4-201ENST00000429747 KCNN1Q92952 543 aa12.37□□□□□ -0.43
CPNE4-201ENST00000429747 NT5C3BQ969T7 300 aa12.37□□□□□ -0.43
CPNE4-201ENST00000429747 NACC2Q96BF6 587 aa12.37□□□□□ -0.43
CPNE4-201ENST00000429747 FUNDC2Q9BWH2 189 aa12.37□□□□□ -0.43
CPNE4-201ENST00000429747 POPDC3Q9HBV1 291 aa12.37□□□□□ -0.43
CPNE4-201ENST00000429747 POLE4Q9NR33 117 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms