RNA–Protein interactions for RNA: ENST00000428962.2

THBS3-202, Transcript of thrombospondin 3, humanhuman

TSL 2

Gene THBS3, Length 1,833 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3-202ENST00000428962 EPHX4Q8IUS5 362 aa13.39□□□□□ -0.27
THBS3-202ENST00000428962 RGL4Q8IZJ4 473 aa13.39□□□□□ -0.27
THBS3-202ENST00000428962 LIX1Q8N485 282 aa13.39□□□□□ -0.27
THBS3-202ENST00000428962 LEMD2Q8NC56 503 aa13.39□□□□□ -0.27
THBS3-202ENST00000428962 TSPAN14Q8NG11 270 aa13.39□□□□□ -0.27
THBS3-202ENST00000428962 TFAP2CQ92754 450 aa13.39□□□□□ -0.27
THBS3-202ENST00000428962 IRF7Q92985 503 aa13.39□□□□□ -0.27
THBS3-202ENST00000428962 CLP1Q92989 425 aaKnown RBP13.39□□□□□ -0.27
THBS3-202ENST00000428962 TRIM43Q96BQ3 446 aaPredicted RBP13.39□□□□□ -0.27
THBS3-202ENST00000428962 BIRC7Q96CA5 298 aa13.39□□□□□ -0.27
THBS3-202ENST00000428962 TIFAQ96CG3 184 aa13.39□□□□□ -0.27
THBS3-202ENST00000428962 RMND5BQ96G75 393 aaPredicted RBP13.39□□□□□ -0.27
THBS3-202ENST00000428962 RPF2Q9H7B2 306 aaKnown RBP13.39□□□□□ -0.27
THBS3-202ENST00000428962 SPHK2Q9NRA0 654 aa13.39□□□□□ -0.27
THBS3-202ENST00000428962 TDP1Q9NUW8 608 aa13.39□□□□□ -0.27
THBS3-202ENST00000428962 DUS2Q9NX74 493 aaKnown RBP13.39□□□□□ -0.27
THBS3-202ENST00000428962 THEGQ9P2T0 379 aa13.39□□□□□ -0.27
THBS3-202ENST00000428962 PCDHGB4Q9UN71 923 aa13.39□□□□□ -0.27
THBS3-202ENST00000428962 SLC8A2Q9UPR5 921 aa13.39□□□□□ -0.27
THBS3-202ENST00000428962 PCDHGB5Q9Y5G0 923 aa13.39□□□□□ -0.27
THBS3-202ENST00000428962 ARHGAP10A1A4S6 786 aa13.38□□□□□ -0.27
THBS3-202ENST00000428962 ZBBXA8MT70 800 aa13.38□□□□□ -0.27
THBS3-202ENST00000428962 RSL1D1O76021 490 aaKnown RBP13.38□□□□□ -0.27
THBS3-202ENST00000428962 FTH1P02794 183 aa13.38□□□□□ -0.27
THBS3-202ENST00000428962 ANXA6P08133 673 aa13.38□□□□□ -0.27
THBS3-202ENST00000428962 LINC00271P0C7V0 271 aa13.38□□□□□ -0.27
THBS3-202ENST00000428962 TYRP14679 529 aa13.38□□□□□ -0.27
THBS3-202ENST00000428962 ATP6V1B1P15313 513 aa13.38□□□□□ -0.27
THBS3-202ENST00000428962 PTPN2P17706 415 aa13.38□□□□□ -0.27
THBS3-202ENST00000428962 NNMTP40261 264 aa13.38□□□□□ -0.27
THBS3-202ENST00000428962 OR4D2P58180 307 aa13.38□□□□□ -0.27
THBS3-202ENST00000428962 HTRA4P83105 476 aaPredicted RBP13.38□□□□□ -0.27
THBS3-202ENST00000428962 HMGCS1Q01581 520 aa13.38□□□□□ -0.27
THBS3-202ENST00000428962 HSPA14Q0VDF9 509 aa13.38□□□□□ -0.27
THBS3-202ENST00000428962 TEAD2Q15562 447 aa13.38□□□□□ -0.27
THBS3-202ENST00000428962 FAM174BQ3ZCQ3 159 aa13.38□□□□□ -0.27
THBS3-202ENST00000428962 SGO1Q5FBB7 561 aa13.38□□□□□ -0.27
THBS3-202ENST00000428962 ASTLQ6HA08 431 aaPredicted RBP13.38□□□□□ -0.27
THBS3-202ENST00000428962 MBOAT1Q6ZNC8 495 aa13.38□□□□□ -0.27
THBS3-202ENST00000428962 OTOP2Q7RTS6 562 aa13.38□□□□□ -0.27
THBS3-202ENST00000428962 SPDYE1Q8NFV5 336 aaPredicted RBP13.38□□□□□ -0.27
THBS3-202ENST00000428962 FAM110BQ8TC76 370 aa13.38□□□□□ -0.27
THBS3-202ENST00000428962 HM13Q8TCT9 377 aa13.38□□□□□ -0.27
THBS3-202ENST00000428962 ASB11Q8WXH4 323 aa13.38□□□□□ -0.27
THBS3-202ENST00000428962 OTUB2Q96DC9 234 aa13.38□□□□□ -0.27
THBS3-202ENST00000428962 HEPHQ9BQS7 1158 aa13.38□□□□□ -0.27
THBS3-202ENST00000428962 BDH2Q9BUT1 245 aa13.38□□□□□ -0.27
THBS3-202ENST00000428962 GRIP2Q9C0E4 1043 aa13.38□□□□□ -0.27
THBS3-202ENST00000428962 CLMPQ9H6B4 373 aa13.38□□□□□ -0.27
THBS3-202ENST00000428962 HCFC1R1Q9NWW0 138 aa13.38□□□□□ -0.27
THBS3-202ENST00000428962 NIPSNAP3AQ9UFN0 247 aaPredicted RBP13.38□□□□□ -0.27
THBS3-202ENST00000428962 OAZ3Q9UMX2 235 aa13.38□□□□□ -0.27
THBS3-202ENST00000428962 FAM149AA5PLN7 773 aa13.37□□□□□ -0.27
THBS3-202ENST00000428962 H3BNH8 94 aa13.37□□□□□ -0.27
THBS3-202ENST00000428962 PRPS2P11908 318 aa13.37□□□□□ -0.27
THBS3-202ENST00000428962 POLR2EP19388 210 aaKnown RBP13.37□□□□□ -0.27
THBS3-202ENST00000428962 GGT1P19440 569 aa13.37□□□□□ -0.27
THBS3-202ENST00000428962 MTPNP58546 118 aa13.37□□□□□ -0.27
THBS3-202ENST00000428962 BOP1Q14137 746 aaKnown RBP13.37□□□□□ -0.27
THBS3-202ENST00000428962 PTGR1Q14914 329 aa13.37□□□□□ -0.27
THBS3-202ENST00000428962 NADK2Q4G0N4 442 aa13.37□□□□□ -0.27
THBS3-202ENST00000428962 FAM98BQ52LJ0 330 aaKnown RBP13.37□□□□□ -0.27
THBS3-202ENST00000428962 CHST14Q8NCH0 376 aa13.37□□□□□ -0.27
THBS3-202ENST00000428962 OR2A12Q8NGT7 310 aa13.37□□□□□ -0.27
THBS3-202ENST00000428962 MCOLN3Q8TDD5 553 aa13.37□□□□□ -0.27
THBS3-202ENST00000428962 POP5Q969H6 163 aaKnown RBP13.37□□□□□ -0.27
THBS3-202ENST00000428962 ADI1Q9BV57 179 aa13.37□□□□□ -0.27
THBS3-202ENST00000428962 OSBPL6Q9BZF3 934 aa13.37□□□□□ -0.27
THBS3-202ENST00000428962 FAM83DQ9H4H8 585 aa13.37□□□□□ -0.27
THBS3-202ENST00000428962 ELOVL6Q9H5J4 265 aa13.37□□□□□ -0.27
THBS3-202ENST00000428962 ZFP14Q9HCL3 533 aa13.37□□□□□ -0.27
THBS3-202ENST00000428962 CD320Q9NPF0 282 aa13.37□□□□□ -0.27
THBS3-202ENST00000428962 IL23AQ9NPF7 189 aa13.37□□□□□ -0.27
THBS3-202ENST00000428962 FARSBQ9NSD9 589 aaKnown RBP13.37□□□□□ -0.27
THBS3-202ENST00000428962 NFKBIL1Q9UBC1 381 aaPredicted RBP13.37□□□□□ -0.27
THBS3-202ENST00000428962 SLCO3A1Q9UIG8 710 aa13.37□□□□□ -0.27
THBS3-202ENST00000428962 ERVW-1Q9UQF0 538 aa13.37□□□□□ -0.27
THBS3-202ENST00000428962 DMTF1Q9Y222 760 aa13.37□□□□□ -0.27
THBS3-202ENST00000428962 TMED5Q9Y3A6 229 aa13.37□□□□□ -0.27
THBS3-202ENST00000428962 INSL6Q9Y581 213 aa13.37□□□□□ -0.27
THBS3-202ENST00000428962 PTPRSQ13332 1948 aa13.37□□□□□ -0.27
THBS3-202ENST00000428962 PIKFYVEQ9Y2I7 2098 aa13.37□□□□□ -0.27
THBS3-202ENST00000428962 TSPAN11A1L157 253 aa13.36□□□□□ -0.27
THBS3-202ENST00000428962 GSTA4O15217 222 aa13.36□□□□□ -0.27
THBS3-202ENST00000428962 PGRP06401 933 aa13.36□□□□□ -0.27
THBS3-202ENST00000428962 ACPPP15309 386 aa13.36□□□□□ -0.27
THBS3-202ENST00000428962 MYF6P23409 242 aa13.36□□□□□ -0.27
THBS3-202ENST00000428962 PRPH2P23942 346 aa13.36□□□□□ -0.27
THBS3-202ENST00000428962 SLC6A12P48065 614 aa13.36□□□□□ -0.27
THBS3-202ENST00000428962 TUBA4AP68366 448 aa13.36□□□□□ -0.27
THBS3-202ENST00000428962 CYP4F3Q08477 520 aa13.36□□□□□ -0.27
THBS3-202ENST00000428962 MERTKQ12866 999 aa13.36□□□□□ -0.27
THBS3-202ENST00000428962 USP39Q53GS9 565 aaKnown RBP13.36□□□□□ -0.27
THBS3-202ENST00000428962 CWF19L1Q69YN2 538 aaKnown RBP13.36□□□□□ -0.27
THBS3-202ENST00000428962 BORAQ6PGQ7 559 aa13.36□□□□□ -0.27
THBS3-202ENST00000428962 RFLNAQ6ZTI6 216 aa13.36□□□□□ -0.27
THBS3-202ENST00000428962 FKBP9P1Q75LS8 142 aa13.36□□□□□ -0.27
THBS3-202ENST00000428962 DET1Q7L5Y6 550 aa13.36□□□□□ -0.27
THBS3-202ENST00000428962 ADIPOR2Q86V24 386 aa13.36□□□□□ -0.27
THBS3-202ENST00000428962 RALGPS2Q86X27 583 aaPredicted RBP13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms